RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 CCDC69A6NI79 296 aa14.36□□□□□ -0.11
CBWD3-208ENST00000612050 KIF5BP33176 963 aa14.36□□□□□ -0.11
CBWD3-208ENST00000612050 ACVR2BQ13705 512 aa14.36□□□□□ -0.11
CBWD3-208ENST00000612050 KRT32Q14532 448 aa14.36□□□□□ -0.11
CBWD3-208ENST00000612050 PWP2Q15269 919 aaKnown RBP14.36□□□□□ -0.11
CBWD3-208ENST00000612050 SEC23AQ15436 765 aa14.36□□□□□ -0.11
CBWD3-208ENST00000612050 CDC37Q16543 378 aaPredicted RBP14.36□□□□□ -0.11
CBWD3-208ENST00000612050 USH1GQ495M9 461 aa14.36□□□□□ -0.11
CBWD3-208ENST00000612050 SYNE3Q6ZMZ3 975 aa14.36□□□□□ -0.11
CBWD3-208ENST00000612050 RNF207Q6ZRF8 634 aa14.36□□□□□ -0.11
CBWD3-208ENST00000612050 CYB5R4Q7L1T6 521 aa14.36□□□□□ -0.11
CBWD3-208ENST00000612050 ARMCX2Q7L311 632 aa14.36□□□□□ -0.11
CBWD3-208ENST00000612050 TRPV1Q8NER1 839 aa14.36□□□□□ -0.11
CBWD3-208ENST00000612050 CTCFLQ8NI51 663 aaPredicted RBP14.36□□□□□ -0.11
CBWD3-208ENST00000612050 DIS3LQ8TF46 1054 aaKnown RBP14.36□□□□□ -0.11
CBWD3-208ENST00000612050 SENP6Q9GZR1 1112 aaPredicted RBP14.36□□□□□ -0.11
CBWD3-208ENST00000612050 UBA5Q9GZZ9 404 aa14.36□□□□□ -0.11
CBWD3-208ENST00000612050 LSG1Q9H089 658 aaKnown RBP14.36□□□□□ -0.11
CBWD3-208ENST00000612050 CYP39A1Q9NYL5 469 aa14.36□□□□□ -0.11
CBWD3-208ENST00000612050 KLRF2D3W0D1 207 aa14.35□□□□□ -0.11
CBWD3-208ENST00000612050 REC8O95072 547 aa14.35□□□□□ -0.11
CBWD3-208ENST00000612050 CALM1P0DP23 149 aa14.35□□□□□ -0.11
CBWD3-208ENST00000612050 CALM2P0DP24 149 aa14.35□□□□□ -0.11
CBWD3-208ENST00000612050 CALM3P0DP25 149 aa14.35□□□□□ -0.11
CBWD3-208ENST00000612050 MUM1L1Q5H9M0 696 aa14.35□□□□□ -0.11
CBWD3-208ENST00000612050 ANO1Q5XXA6 986 aa14.35□□□□□ -0.11
CBWD3-208ENST00000612050 CREB3L3Q68CJ9 461 aa14.35□□□□□ -0.11
CBWD3-208ENST00000612050 NOL8Q76FK4 1167 aaKnown RBP14.35□□□□□ -0.11
CBWD3-208ENST00000612050 FBXO11Q86XK2 927 aa14.35□□□□□ -0.11
CBWD3-208ENST00000612050 ADGRF4Q8IZF3 695 aa14.35□□□□□ -0.11
CBWD3-208ENST00000612050 FAM133AQ8N9E0 248 aa14.35□□□□□ -0.11
CBWD3-208ENST00000612050 VAT1LQ9HCJ6 419 aa14.35□□□□□ -0.11
CBWD3-208ENST00000612050 PRKAG2Q9UGJ0 569 aa14.35□□□□□ -0.11
CBWD3-208ENST00000612050 MRPL11Q9Y3B7 192 aaKnown RBP14.35□□□□□ -0.11
CBWD3-208ENST00000612050 SLC27A2O14975 620 aa14.34□□□□□ -0.11
CBWD3-208ENST00000612050 PRC1O43663 620 aa14.34□□□□□ -0.11
CBWD3-208ENST00000612050 IGHA2P01877 340 aa14.34□□□□□ -0.11
CBWD3-208ENST00000612050 CALML3P27482 149 aa14.34□□□□□ -0.11
CBWD3-208ENST00000612050 GNAQP50148 359 aa14.34□□□□□ -0.11
CBWD3-208ENST00000612050 GJC2Q5T442 439 aaPredicted RBP14.34□□□□□ -0.11
CBWD3-208ENST00000612050 CCDC144CPQ8IYA2 1237 aa14.34□□□□□ -0.11
CBWD3-208ENST00000612050 C7orf61Q8IZ16 206 aa14.34□□□□□ -0.11
CBWD3-208ENST00000612050 NUP133Q8WUM0 1156 aa14.34□□□□□ -0.11
CBWD3-208ENST00000612050 AMNQ9BXJ7 453 aa14.34□□□□□ -0.11
CBWD3-208ENST00000612050 H0YGN5 161 aa14.33□□□□□ -0.11
CBWD3-208ENST00000612050 DDAH1O94760 285 aa14.33□□□□□ -0.11
CBWD3-208ENST00000612050 HMGB1P09429 215 aaKnown RBP14.33□□□□□ -0.11
CBWD3-208ENST00000612050 ZNF865P0CJ78 1059 aaPredicted RBP14.33□□□□□ -0.11
CBWD3-208ENST00000612050 FGD1P98174 961 aa14.33□□□□□ -0.11
CBWD3-208ENST00000612050 CNTN2Q02246 1040 aa14.33□□□□□ -0.11
CBWD3-208ENST00000612050 BAATQ14032 418 aaPredicted RBP14.33□□□□□ -0.11
CBWD3-208ENST00000612050 NECTIN1Q15223 517 aa14.33□□□□□ -0.11
CBWD3-208ENST00000612050 CHST3Q7LGC8 479 aa14.33□□□□□ -0.11
CBWD3-208ENST00000612050 MB21D2Q8IYB1 491 aaPredicted RBP14.33□□□□□ -0.11
CBWD3-208ENST00000612050 DNERQ8NFT8 737 aa14.33□□□□□ -0.11
CBWD3-208ENST00000612050 TNRC18O15417 2968 aaPredicted RBP14.33□□□□□ -0.12
CBWD3-208ENST00000612050 NFIBO00712 420 aa14.32□□□□□ -0.12
CBWD3-208ENST00000612050 EIF5BO60841 1220 aaKnown RBP14.32□□□□□ -0.12
CBWD3-208ENST00000612050 DUSP11O75319 330 aaKnown RBP14.32□□□□□ -0.12
CBWD3-208ENST00000612050 SNAI1O95863 264 aaPredicted RBP14.32□□□□□ -0.12
CBWD3-208ENST00000612050 PDE4DQ08499 809 aa14.32□□□□□ -0.12
CBWD3-208ENST00000612050 GRM4Q14833 912 aa14.32□□□□□ -0.12
CBWD3-208ENST00000612050 LRRC41Q15345 812 aa14.32□□□□□ -0.12
CBWD3-208ENST00000612050 CCDC144BQ3MJ40 725 aa14.32□□□□□ -0.12
CBWD3-208ENST00000612050 PCSK9Q8NBP7 692 aaKnown RBP14.32□□□□□ -0.12
CBWD3-208ENST00000612050 RGS22Q8NE09 1264 aa14.32□□□□□ -0.12
CBWD3-208ENST00000612050 NEK1Q96PY6 1258 aa14.32□□□□□ -0.12
CBWD3-208ENST00000612050 MAP3K14Q99558 947 aa14.32□□□□□ -0.12
CBWD3-208ENST00000612050 LZTS2Q9BRK4 669 aa14.32□□□□□ -0.12
CBWD3-208ENST00000612050 AP5M1Q9H0R1 490 aa14.32□□□□□ -0.12
CBWD3-208ENST00000612050 VTA1Q9NP79 307 aa14.32□□□□□ -0.12
CBWD3-208ENST00000612050 SEC63Q9UGP8 760 aaKnown RBP14.32□□□□□ -0.12
CBWD3-208ENST00000612050 SLC12A7Q9Y666 1083 aa14.32□□□□□ -0.12
CBWD3-208ENST00000612050 ZBTB5O15062 677 aa14.32□□□□□ -0.12
CBWD3-208ENST00000612050 ZEB2O60315 1214 aa14.32□□□□□ -0.12
CBWD3-208ENST00000612050 ABCB7O75027 752 aa14.32□□□□□ -0.12
CBWD3-208ENST00000612050 C6orf222P0C671 652 aaPredicted RBP14.32□□□□□ -0.12
CBWD3-208ENST00000612050 COL6A1P12109 1028 aa14.32□□□□□ -0.12
CBWD3-208ENST00000612050 TAL1P17542 331 aaPredicted RBP14.32□□□□□ -0.12
CBWD3-208ENST00000612050 ALDH5A1P51649 535 aaPredicted RBP14.32□□□□□ -0.12
CBWD3-208ENST00000612050 TNFAIP2Q03169 654 aa14.32□□□□□ -0.12
CBWD3-208ENST00000612050 QRICH1Q2TAL8 776 aa14.32□□□□□ -0.12
CBWD3-208ENST00000612050 STOX1Q6ZVD7 989 aa14.32□□□□□ -0.12
CBWD3-208ENST00000612050 SKAP1Q86WV1 359 aa14.32□□□□□ -0.12
CBWD3-208ENST00000612050 HOMER1Q86YM7 354 aa14.32□□□□□ -0.12
CBWD3-208ENST00000612050 ZNF654Q8IZM8 581 aa14.32□□□□□ -0.12
CBWD3-208ENST00000612050 TSEN34Q9BSV6 310 aaKnown RBP14.32□□□□□ -0.12
CBWD3-208ENST00000612050 JMJD4Q9H9V9 463 aa14.32□□□□□ -0.12
CBWD3-208ENST00000612050 MCM3APO60318 1980 aa14.31□□□□□ -0.12
CBWD3-208ENST00000612050 PALM3A6NDB9 673 aaPredicted RBP14.31□□□□□ -0.12
CBWD3-208ENST00000612050 SOWAHBA6NEL2 793 aa14.31□□□□□ -0.12
CBWD3-208ENST00000612050 MOXD2PA6NHM9 499 aa14.31□□□□□ -0.12
CBWD3-208ENST00000612050 PGK1P00558 417 aa14.31□□□□□ -0.12
CBWD3-208ENST00000612050 LIFRP42702 1097 aa14.31□□□□□ -0.12
CBWD3-208ENST00000612050 RPS6P62753 249 aaKnown RBP14.31□□□□□ -0.12
CBWD3-208ENST00000612050 BRDTQ58F21 947 aaPredicted RBP14.31□□□□□ -0.12
CBWD3-208ENST00000612050 IQSEC1Q6DN90 963 aa14.31□□□□□ -0.12
CBWD3-208ENST00000612050 SAMD3Q8N6K7 520 aa14.31□□□□□ -0.12
CBWD3-208ENST00000612050 IGDCC4Q8TDY8 1250 aa14.31□□□□□ -0.12
CBWD3-208ENST00000612050 VTI1AQ96AJ9 217 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms