RNA–Protein interactions for RNA: ENST00000611976.1

CDC42EP3-206, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CDC42EP3, Length 5,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-206ENST00000611976 PCDHA12Q9UN75 941 aa12.02□□□□□ -0.48
CDC42EP3-206ENST00000611976 CEP83Q9Y592 693 aa12.02□□□□□ -0.48
CDC42EP3-206ENST00000611976 ZNF609O15014 1411 aa12.02□□□□□ -0.48
CDC42EP3-206ENST00000611976 DEPDC5O75140 1603 aa12.02□□□□□ -0.48
CDC42EP3-206ENST00000611976 PPLO60437 1756 aa12.02□□□□□ -0.49
CDC42EP3-206ENST00000611976 ERVV-1B6SEH8 477 aa12.02□□□□□ -0.49
CDC42EP3-206ENST00000611976 EXOC3O60645 756 aa12.02□□□□□ -0.49
CDC42EP3-206ENST00000611976 LIG3P49916 1009 aa12.02□□□□□ -0.49
CDC42EP3-206ENST00000611976 SMTNP53814 917 aa12.02□□□□□ -0.49
CDC42EP3-206ENST00000611976 MXRA7P84157 204 aa12.02□□□□□ -0.49
CDC42EP3-206ENST00000611976 RASSF7Q02833 373 aa12.02□□□□□ -0.49
CDC42EP3-206ENST00000611976 MSANTD4Q8NCY6 345 aa12.02□□□□□ -0.49
CDC42EP3-206ENST00000611976 MRFAP1Q9Y605 127 aa12.02□□□□□ -0.49
CDC42EP3-206ENST00000611976 NPHP4O75161 1426 aaPredicted RBP12.02□□□□□ -0.49
CDC42EP3-206ENST00000611976 KIDINS220Q9ULH0 1771 aa12.02□□□□□ -0.49
CDC42EP3-206ENST00000611976 A0A087WUV0 522 aaPredicted RBP12.02□□□□□ -0.49
CDC42EP3-206ENST00000611976 hCG_1984214I3L0E3 225 aa12.02□□□□□ -0.49
CDC42EP3-206ENST00000611976 RIMBP2O15034 1052 aa12.02□□□□□ -0.49
CDC42EP3-206ENST00000611976 RGS16O15492 202 aaPredicted RBP12.02□□□□□ -0.49
CDC42EP3-206ENST00000611976 CHMP2AO43633 222 aa12.02□□□□□ -0.49
CDC42EP3-206ENST00000611976 RAD51AP2Q09MP3 1159 aa12.02□□□□□ -0.49
CDC42EP3-206ENST00000611976 WDR44Q5JSH3 913 aa12.02□□□□□ -0.49
CDC42EP3-206ENST00000611976 LIN9Q5TKA1 542 aa12.02□□□□□ -0.49
CDC42EP3-206ENST00000611976 GKAP1Q5VSY0 366 aaPredicted RBP12.02□□□□□ -0.49
CDC42EP3-206ENST00000611976 ALS2CLQ60I27 953 aa12.02□□□□□ -0.49
CDC42EP3-206ENST00000611976 CYB5R4Q7L1T6 521 aa12.02□□□□□ -0.49
CDC42EP3-206ENST00000611976 CCDC105Q8IYK2 499 aa12.02□□□□□ -0.49
CDC42EP3-206ENST00000611976 ZNF713Q8N859 430 aaPredicted RBP12.02□□□□□ -0.49
CDC42EP3-206ENST00000611976 IL25Q9H293 177 aa12.02□□□□□ -0.49
CDC42EP3-206ENST00000611976 ABHD10Q9NUJ1 306 aa12.02□□□□□ -0.49
CDC42EP3-206ENST00000611976 ASIC3Q9UHC3 531 aa12.02□□□□□ -0.49
CDC42EP3-206ENST00000611976 MROH2AA6NES4 1674 aa12.02□□□□□ -0.49
CDC42EP3-206ENST00000611976 VWDEQ8N2E2 1590 aa12.02□□□□□ -0.49
CDC42EP3-206ENST00000611976 TRIM37O94972 964 aa12.02□□□□□ -0.49
CDC42EP3-206ENST00000611976 H2AFZP0C0S5 128 aa12.02□□□□□ -0.49
CDC42EP3-206ENST00000611976 KRT5P13647 590 aa12.02□□□□□ -0.49
CDC42EP3-206ENST00000611976 GBP1P32455 592 aa12.02□□□□□ -0.49
CDC42EP3-206ENST00000611976 H2AFVQ71UI9 128 aa12.02□□□□□ -0.49
CDC42EP3-206ENST00000611976 KCNB2Q92953 911 aa12.02□□□□□ -0.49
CDC42EP3-206ENST00000611976 ADAM21Q9UKJ8 722 aa12.02□□□□□ -0.49
CDC42EP3-206ENST00000611976 FAM184BQ9ULE4 1060 aa12.02□□□□□ -0.49
CDC42EP3-206ENST00000611976 NEDD4P46934 1319 aa12.02□□□□□ -0.49
CDC42EP3-206ENST00000611976 VGLL3A8MV65 326 aa12.01□□□□□ -0.49
CDC42EP3-206ENST00000611976 ALX1Q15699 326 aa12.01□□□□□ -0.49
CDC42EP3-206ENST00000611976 FYB2Q5VWT5 728 aa12.01□□□□□ -0.49
CDC42EP3-206ENST00000611976 TTLL11Q8NHH1 800 aa12.01□□□□□ -0.49
CDC42EP3-206ENST00000611976 DDX25Q9UHL0 483 aaKnown RBP12.01□□□□□ -0.49
CDC42EP3-206ENST00000611976 NDC80O14777 642 aa12.01□□□□□ -0.49
CDC42EP3-206ENST00000611976 MAP2K2P36507 400 aa12.01□□□□□ -0.49
CDC42EP3-206ENST00000611976 C2orf54Q08AI8 447 aa12.01□□□□□ -0.49
CDC42EP3-206ENST00000611976 RASGRF1Q13972 1273 aa12.01□□□□□ -0.49
CDC42EP3-206ENST00000611976 LY9Q9HBG7 655 aa12.01□□□□□ -0.49
CDC42EP3-206ENST00000611976 STIM2Q9P246 746 aa12.01□□□□□ -0.49
CDC42EP3-206ENST00000611976 MYOM1P52179 1685 aa12.01□□□□□ -0.49
CDC42EP3-206ENST00000611976 ADAM9Q13443 819 aa12.01□□□□□ -0.49
CDC42EP3-206ENST00000611976 E4F1Q66K89 784 aaPredicted RBP12.01□□□□□ -0.49
CDC42EP3-206ENST00000611976 SHC4Q6S5L8 630 aa12.01□□□□□ -0.49
CDC42EP3-206ENST00000611976 SH3GLB2Q9NR46 395 aa12.01□□□□□ -0.49
CDC42EP3-206ENST00000611976 FEZ2Q9UHY8 353 aaPredicted RBP12.01□□□□□ -0.49
CDC42EP3-206ENST00000611976 SGMS1Q86VZ5 419 aa12.01□□□□□ -0.49
CDC42EP3-206ENST00000611976 OGFOD1Q8N543 542 aa12.01□□□□□ -0.49
CDC42EP3-206ENST00000611976 TSNARE1Q96NA8 513 aa12.01□□□□□ -0.49
CDC42EP3-206ENST00000611976 PLEKHA4Q9H4M7 779 aa12.01□□□□□ -0.49
CDC42EP3-206ENST00000611976 DISC1Q9NRI5 854 aa12.01□□□□□ -0.49
CDC42EP3-206ENST00000611976 ASAP1Q9ULH1 1129 aa12.01□□□□□ -0.49
CDC42EP3-206ENST00000611976 ANO9A1A5B4 782 aa12□□□□□ -0.49
CDC42EP3-206ENST00000611976 KIF28PB7ZC32 967 aa12□□□□□ -0.49
CDC42EP3-206ENST00000611976 TADA3O75528 432 aa12□□□□□ -0.49
CDC42EP3-206ENST00000611976 HEXIM1O94992 359 aaKnown RBP12□□□□□ -0.49
CDC42EP3-206ENST00000611976 CLNS1AP54105 237 aaKnown RBP12□□□□□ -0.49
CDC42EP3-206ENST00000611976 KRT12Q99456 494 aa12□□□□□ -0.49
CDC42EP3-206ENST00000611976 PSTPIP2Q9H939 334 aa12□□□□□ -0.49
CDC42EP3-206ENST00000611976 ARHGEF10LQ9HCE6 1279 aa12□□□□□ -0.49
CDC42EP3-206ENST00000611976 HOMER3Q9NSC5 361 aa12□□□□□ -0.49
CDC42EP3-206ENST00000611976 EIF2AK3Q9NZJ5 1116 aaKnown RBP12□□□□□ -0.49
CDC42EP3-206ENST00000611976 EHHADHQ08426 723 aa12□□□□□ -0.49
CDC42EP3-206ENST00000611976 ANKRD13CQ8N6S4 541 aa12□□□□□ -0.49
CDC42EP3-206ENST00000611976 PPFIBP2Q8ND30 876 aa12□□□□□ -0.49
CDC42EP3-206ENST00000611976 MPHOSPH6Q99547 160 aaKnown RBP12□□□□□ -0.49
CDC42EP3-206ENST00000611976 ADGRG1Q9Y653 693 aa12□□□□□ -0.49
CDC42EP3-206ENST00000611976 UBN2Q6ZU65 1347 aa12□□□□□ -0.49
CDC42EP3-206ENST00000611976 GOLGA8HP0CJ92 632 aa12□□□□□ -0.49
CDC42EP3-206ENST00000611976 EMBQ6PCB8 327 aa12□□□□□ -0.49
CDC42EP3-206ENST00000611976 PNMA8AQ86V59 439 aaPredicted RBP12□□□□□ -0.49
CDC42EP3-206ENST00000611976 ZBTB21Q9ULJ3 1066 aa12□□□□□ -0.49
CDC42EP3-206ENST00000611976 ZBTB1Q9Y2K1 713 aa12□□□□□ -0.49
CDC42EP3-206ENST00000611976 SALL3Q9BXA9 1300 aa12□□□□□ -0.49
CDC42EP3-206ENST00000611976 PCDHB13Q9Y5F0 798 aa12□□□□□ -0.49
CDC42EP3-206ENST00000611976 CDHR2Q9BYE9 1310 aa12□□□□□ -0.49
CDC42EP3-206ENST00000611976 LGALS16A8MUM7 142 aa11.99□□□□□ -0.49
CDC42EP3-206ENST00000611976 ZMYND10O75800 440 aa11.99□□□□□ -0.49
CDC42EP3-206ENST00000611976 GAS8O95995 478 aa11.99□□□□□ -0.49
CDC42EP3-206ENST00000611976 FNBP1Q96RU3 617 aa11.99□□□□□ -0.49
CDC42EP3-206ENST00000611976 BRIP1Q9BX63 1249 aa11.99□□□□□ -0.49
CDC42EP3-206ENST00000611976 FAM114A2Q9NRY5 505 aa11.99□□□□□ -0.49
CDC42EP3-206ENST00000611976 CCNL1Q9UK58 526 aaPredicted RBP11.99□□□□□ -0.49
CDC42EP3-206ENST00000611976 PCDHA13Q9Y5I0 950 aa11.99□□□□□ -0.49
CDC42EP3-206ENST00000611976 CPDO75976 1380 aa11.99□□□□□ -0.49
CDC42EP3-206ENST00000611976 ITSN1Q15811 1721 aa11.99□□□□□ -0.49
CDC42EP3-206ENST00000611976 FKBP3Q00688 224 aaKnown RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms