RNA–Protein interactions for RNA: ENST00000611950.1

PCDHGC3-202, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGC3, Length 2,849 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-202ENST00000611950 TOMM70O94826 608 aa11.99□□□□□ -0.49
PCDHGC3-202ENST00000611950 KIF4AO95239 1232 aa11.99□□□□□ -0.49
PCDHGC3-202ENST00000611950 CYP2D6P10635 497 aa11.99□□□□□ -0.49
PCDHGC3-202ENST00000611950 ZNF18P17022 549 aa11.99□□□□□ -0.49
PCDHGC3-202ENST00000611950 NLGN1Q8N2Q7 840 aa11.99□□□□□ -0.49
PCDHGC3-202ENST00000611950 CDC5LQ99459 802 aaKnown RBP11.99□□□□□ -0.49
PCDHGC3-202ENST00000611950 FOXP1Q9H334 677 aaPredicted RBP11.99□□□□□ -0.49
PCDHGC3-202ENST00000611950 KCND1Q9NSA2 647 aa11.99□□□□□ -0.49
PCDHGC3-202ENST00000611950 RRP15Q9Y3B9 282 aaKnown RBP11.99□□□□□ -0.49
PCDHGC3-202ENST00000611950 SRPRBQ9Y5M8 271 aaKnown RBP11.99□□□□□ -0.49
PCDHGC3-202ENST00000611950 CACNA1SQ13698 1873 aa11.98□□□□□ -0.49
PCDHGC3-202ENST00000611950 BAZ2AQ9UIF9 1905 aaKnown RBP11.98□□□□□ -0.49
PCDHGC3-202ENST00000611950 RFC4P35249 363 aa11.98□□□□□ -0.49
PCDHGC3-202ENST00000611950 TGFB2P61812 414 aa11.98□□□□□ -0.49
PCDHGC3-202ENST00000611950 PTGDRQ13258 359 aa11.98□□□□□ -0.49
PCDHGC3-202ENST00000611950 PKN1Q16512 942 aa11.98□□□□□ -0.49
PCDHGC3-202ENST00000611950 MMS22LQ6ZRQ5 1243 aa11.98□□□□□ -0.49
PCDHGC3-202ENST00000611950 PPFIBP1Q86W92 1011 aa11.98□□□□□ -0.49
PCDHGC3-202ENST00000611950 MLKLQ8NB16 471 aa11.98□□□□□ -0.49
PCDHGC3-202ENST00000611950 TSPYL2Q9H2G4 693 aaPredicted RBP11.98□□□□□ -0.49
PCDHGC3-202ENST00000611950 RNF41Q9H4P4 317 aaPredicted RBP11.98□□□□□ -0.49
PCDHGC3-202ENST00000611950 SUGCTQ9HAC7 445 aa11.98□□□□□ -0.49
PCDHGC3-202ENST00000611950 ARGLU1Q9NWB6 273 aaPredicted RBP11.98□□□□□ -0.49
PCDHGC3-202ENST00000611950 KIF13BQ9NQT8 1826 aa11.98□□□□□ -0.49
PCDHGC3-202ENST00000611950 USP17L12C9JPN9 530 aa11.98□□□□□ -0.49
PCDHGC3-202ENST00000611950 USP17L21D6R901 530 aa11.98□□□□□ -0.49
PCDHGC3-202ENST00000611950 MARCH6O60337 910 aa11.98□□□□□ -0.49
PCDHGC3-202ENST00000611950 DPEP1P16444 411 aa11.98□□□□□ -0.49
PCDHGC3-202ENST00000611950 ALDH1B1P30837 517 aa11.98□□□□□ -0.49
PCDHGC3-202ENST00000611950 FXR1P51114 621 aaKnown RBP eCLIP11.98□□□□□ -0.49
PCDHGC3-202ENST00000611950 RPS6KA3P51812 740 aa11.98□□□□□ -0.49
PCDHGC3-202ENST00000611950 ST5P78524 1137 aa11.98□□□□□ -0.49
PCDHGC3-202ENST00000611950 TBX2Q13207 712 aaPredicted RBP11.98□□□□□ -0.49
PCDHGC3-202ENST00000611950 SLC5A9Q2M3M2 681 aa11.98□□□□□ -0.49
PCDHGC3-202ENST00000611950 ZNF569Q5MCW4 686 aa11.98□□□□□ -0.49
PCDHGC3-202ENST00000611950 C16orf87Q6PH81 154 aa11.98□□□□□ -0.49
PCDHGC3-202ENST00000611950 OGFOD1Q8N543 542 aa11.98□□□□□ -0.49
PCDHGC3-202ENST00000611950 ESR2Q92731 530 aa11.98□□□□□ -0.49
PCDHGC3-202ENST00000611950 PAGE5Q96GU1 130 aa11.98□□□□□ -0.49
PCDHGC3-202ENST00000611950 AATFQ9NY61 560 aaKnown RBP eCLIP11.98□□□□□ -0.49
PCDHGC3-202ENST00000611950 TAB2Q9NYJ8 693 aa11.98□□□□□ -0.49
PCDHGC3-202ENST00000611950 PCNTO95613 3336 aa11.98□□□□□ -0.49
PCDHGC3-202ENST00000611950 AKR1B15C9JRZ8 316 aaPredicted RBP11.97□□□□□ -0.49
PCDHGC3-202ENST00000611950 RNF225M0QZC1 329 aaPredicted RBP11.97□□□□□ -0.49
PCDHGC3-202ENST00000611950 RHOXF2BP0C7M4 288 aa11.97□□□□□ -0.49
PCDHGC3-202ENST00000611950 KRT2P35908 639 aa11.97□□□□□ -0.49
PCDHGC3-202ENST00000611950 PLCD1P51178 756 aa11.97□□□□□ -0.49
PCDHGC3-202ENST00000611950 TMCO4Q5TGY1 634 aa11.97□□□□□ -0.49
PCDHGC3-202ENST00000611950 RPUSD2Q8IZ73 545 aaKnown RBP11.97□□□□□ -0.49
PCDHGC3-202ENST00000611950 RASSF8Q8NHQ8 419 aa11.97□□□□□ -0.49
PCDHGC3-202ENST00000611950 ENOX1Q8TC92 643 aaKnown RBP11.97□□□□□ -0.49
PCDHGC3-202ENST00000611950 GPKOWQ92917 476 aaPredicted RBP eCLIP11.97□□□□□ -0.49
PCDHGC3-202ENST00000611950 HINFPQ9BQA5 517 aa11.97□□□□□ -0.49
PCDHGC3-202ENST00000611950 RHOXF2Q9BQY4 288 aa11.97□□□□□ -0.49
PCDHGC3-202ENST00000611950 PARD6BQ9BYG5 372 aa11.97□□□□□ -0.49
PCDHGC3-202ENST00000611950 A0A1B0GUL6 1792 aa11.97□□□□□ -0.49
PCDHGC3-202ENST00000611950 TPM1P09493 284 aa11.97□□□□□ -0.49
PCDHGC3-202ENST00000611950 SARSP49591 514 aaKnown RBP11.97□□□□□ -0.49
PCDHGC3-202ENST00000611950 RRAGBQ5VZM2 374 aa11.97□□□□□ -0.49
PCDHGC3-202ENST00000611950 ARMC3Q5W041 872 aa11.97□□□□□ -0.49
PCDHGC3-202ENST00000611950 MAMSTRQ6ZN01 415 aa11.97□□□□□ -0.49
PCDHGC3-202ENST00000611950 MYLK4Q86YV6 388 aaPredicted RBP11.97□□□□□ -0.49
PCDHGC3-202ENST00000611950 FAM163AQ96GL9 167 aaPredicted RBP11.97□□□□□ -0.49
PCDHGC3-202ENST00000611950 AGAP3Q96P47 875 aa11.97□□□□□ -0.49
PCDHGC3-202ENST00000611950 ZSCAN10Q96SZ4 725 aaPredicted RBP11.97□□□□□ -0.49
PCDHGC3-202ENST00000611950 YIPF2Q9BWQ6 316 aa11.97□□□□□ -0.49
PCDHGC3-202ENST00000611950 KIAA1551Q9HCM1 1747 aa11.97□□□□□ -0.49
PCDHGC3-202ENST00000611950 PP2D1A8MPX8 630 aa11.96□□□□□ -0.49
PCDHGC3-202ENST00000611950 IPO5O00410 1097 aaKnown RBP11.96□□□□□ -0.49
PCDHGC3-202ENST00000611950 STX10O60499 249 aa11.96□□□□□ -0.49
PCDHGC3-202ENST00000611950 ZRANB2O95218 330 aaKnown RBP eCLIP11.96□□□□□ -0.49
PCDHGC3-202ENST00000611950 CUL4BQ13620 913 aa11.96□□□□□ -0.49
PCDHGC3-202ENST00000611950 MCM6Q14566 821 aa11.96□□□□□ -0.49
PCDHGC3-202ENST00000611950 NR1I3Q14994 352 aa11.96□□□□□ -0.49
PCDHGC3-202ENST00000611950 ANKRD18AQ8IVF6 992 aa11.96□□□□□ -0.49
PCDHGC3-202ENST00000611950 FMNL3Q8IVF7 1028 aa11.96□□□□□ -0.49
PCDHGC3-202ENST00000611950 CELF1Q92879 486 aaKnown RBP11.96□□□□□ -0.49
PCDHGC3-202ENST00000611950 TACO1Q9BSH4 297 aaKnown RBP11.96□□□□□ -0.49
PCDHGC3-202ENST00000611950 TRIM10Q9UDY6 481 aa11.96□□□□□ -0.49
PCDHGC3-202ENST00000611950 GDAQ9Y2T3 454 aa11.96□□□□□ -0.49
PCDHGC3-202ENST00000611950 SUGT1Q9Y2Z0 365 aa11.96□□□□□ -0.49
PCDHGC3-202ENST00000611950 TRIM49BA6NDI0 452 aa11.96□□□□□ -0.49
PCDHGC3-202ENST00000611950 EFCAB8A8MWE9 144 aa11.96□□□□□ -0.49
PCDHGC3-202ENST00000611950 N4BP3O15049 544 aa11.96□□□□□ -0.49
PCDHGC3-202ENST00000611950 GYS1P13807 737 aa11.96□□□□□ -0.49
PCDHGC3-202ENST00000611950 OAS2P29728 719 aaKnown RBP11.96□□□□□ -0.49
PCDHGC3-202ENST00000611950 KCNJ6P48051 423 aa11.96□□□□□ -0.49
PCDHGC3-202ENST00000611950 RCAN1P53805 252 aa11.96□□□□□ -0.49
PCDHGC3-202ENST00000611950 FUT2Q10981 343 aa11.96□□□□□ -0.49
PCDHGC3-202ENST00000611950 IFT88Q13099 833 aa11.96□□□□□ -0.49
PCDHGC3-202ENST00000611950 KIF4BQ2VIQ3 1234 aa11.96□□□□□ -0.49
PCDHGC3-202ENST00000611950 RASGRP2Q7LDG7 609 aa11.96□□□□□ -0.49
PCDHGC3-202ENST00000611950 CATIPQ7Z7H3 387 aa11.96□□□□□ -0.49
PCDHGC3-202ENST00000611950 CACTIN-AS1Q8N1I8 211 aa11.96□□□□□ -0.49
PCDHGC3-202ENST00000611950 DRAXINQ8NBI3 349 aaPredicted RBP11.96□□□□□ -0.49
PCDHGC3-202ENST00000611950 ZNF483Q8TF39 744 aaPredicted RBP11.96□□□□□ -0.49
PCDHGC3-202ENST00000611950 KIFC2Q96AC6 838 aa11.96□□□□□ -0.49
PCDHGC3-202ENST00000611950 FAM84BQ96KN1 310 aaPredicted RBP11.96□□□□□ -0.49
PCDHGC3-202ENST00000611950 TMX4Q9H1E5 349 aaPredicted RBP11.96□□□□□ -0.49
PCDHGC3-202ENST00000611950 CPVLQ9H3G5 476 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms