RNA–Protein interactions for RNA: ENST00000611725.4

SNX13-213, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 6,817 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-213ENST00000611725 CYP27A1Q02318 531 aa7.1□□□□□ -1.27
SNX13-213ENST00000611725 DPYDQ12882 1025 aa7.1□□□□□ -1.27
SNX13-213ENST00000611725 MTF1Q14872 753 aa7.1□□□□□ -1.27
SNX13-213ENST00000611725 TNIP1Q15025 636 aa7.1□□□□□ -1.27
SNX13-213ENST00000611725 TXNRD1Q16881 649 aa7.1□□□□□ -1.27
SNX13-213ENST00000611725 ANKRD13CQ8N6S4 541 aa7.1□□□□□ -1.27
SNX13-213ENST00000611725 RGL2O15211 777 aa7.1□□□□□ -1.27
SNX13-213ENST00000611725 GCFC2P16383 781 aaKnown RBP7.1□□□□□ -1.27
SNX13-213ENST00000611725 PRPHP41219 470 aa7.1□□□□□ -1.27
SNX13-213ENST00000611725 PPP4CP60510 307 aa7.1□□□□□ -1.27
SNX13-213ENST00000611725 FKBP3Q00688 224 aaKnown RBP7.1□□□□□ -1.27
SNX13-213ENST00000611725 SKIDA1Q1XH10 827 aa7.1□□□□□ -1.27
SNX13-213ENST00000611725 SLC9C1Q4G0N8 1177 aa7.1□□□□□ -1.27
SNX13-213ENST00000611725 RRAGAQ7L523 313 aa7.1□□□□□ -1.27
SNX13-213ENST00000611725 ADSSL1Q8N142 457 aa7.1□□□□□ -1.27
SNX13-213ENST00000611725 RPGRIP1Q96KN7 1286 aa7.1□□□□□ -1.27
SNX13-213ENST00000611725 TRIM9Q9C026 710 aa7.1□□□□□ -1.27
SNX13-213ENST00000611725 LGALS16A8MUM7 142 aa7.09□□□□□ -1.27
SNX13-213ENST00000611725 TMCO5BA8MYB1 307 aa7.09□□□□□ -1.27
SNX13-213ENST00000611725 TTLL1O95922 423 aa7.09□□□□□ -1.27
SNX13-213ENST00000611725 ZNF18P17022 549 aa7.09□□□□□ -1.27
SNX13-213ENST00000611725 AMNQ9BXJ7 453 aa7.09□□□□□ -1.27
SNX13-213ENST00000611725 KNDC1Q76NI1 1749 aa7.09□□□□□ -1.27
SNX13-213ENST00000611725 TNS2Q63HR2 1409 aa7.09□□□□□ -1.27
SNX13-213ENST00000611725 NDUFA10O95299 355 aa7.09□□□□□ -1.27
SNX13-213ENST00000611725 SLC16A2P36021 539 aa7.09□□□□□ -1.27
SNX13-213ENST00000611725 TCP11X2Q5H9J9 407 aa7.09□□□□□ -1.27
SNX13-213ENST00000611725 HDXQ7Z353 690 aa7.09□□□□□ -1.27
SNX13-213ENST00000611725 COA1Q9GZY4 146 aa7.09□□□□□ -1.27
SNX13-213ENST00000611725 TTC26A0AVF1 554 aa7.09□□□□□ -1.27
SNX13-213ENST00000611725 USP17L5A8MUK1 530 aa7.09□□□□□ -1.27
SNX13-213ENST00000611725 PRCPP42785 496 aa7.09□□□□□ -1.27
SNX13-213ENST00000611725 FXR1P51114 621 aaKnown RBP eCLIP7.09□□□□□ -1.27
SNX13-213ENST00000611725 EARS2Q5JPH6 523 aaKnown RBP7.09□□□□□ -1.27
SNX13-213ENST00000611725 TYW1BQ6NUM6 668 aa7.09□□□□□ -1.27
SNX13-213ENST00000611725 EHMT1Q9H9B1 1298 aa7.09□□□□□ -1.27
SNX13-213ENST00000611725 DAGLAQ9Y4D2 1042 aa7.09□□□□□ -1.27
SNX13-213ENST00000611725 BMP6P22004 513 aa7.09□□□□□ -1.27
SNX13-213ENST00000611725 MRC1P22897 1456 aa7.09□□□□□ -1.28
SNX13-213ENST00000611725 HLTFQ14527 1009 aaKnown RBP eCLIP7.09□□□□□ -1.28
SNX13-213ENST00000611725 TMEM60Q9H2L4 133 aa7.09□□□□□ -1.28
SNX13-213ENST00000611725 VEZTQ9HBM0 779 aa7.09□□□□□ -1.28
SNX13-213ENST00000611725 TBC1D7Q9P0N9 293 aa7.09□□□□□ -1.28
SNX13-213ENST00000611725 LIMA1Q9UHB6 759 aaKnown RBP7.09□□□□□ -1.28
SNX13-213ENST00000611725 PVALEFA0A1B0GWK0 134 aa7.08□□□□□ -1.28
SNX13-213ENST00000611725 POTEMA6NI47 508 aa7.08□□□□□ -1.28
SNX13-213ENST00000611725 GOLGA6L10A6NI86 522 aa7.08□□□□□ -1.28
SNX13-213ENST00000611725 TADA3O75528 432 aa7.08□□□□□ -1.28
SNX13-213ENST00000611725 NR1I3Q14994 352 aa7.08□□□□□ -1.28
SNX13-213ENST00000611725 LONRF2Q1L5Z9 754 aa7.08□□□□□ -1.28
SNX13-213ENST00000611725 RAD9BQ6WBX8 426 aa7.08□□□□□ -1.28
SNX13-213ENST00000611725 ZBTB9Q96C00 473 aa7.08□□□□□ -1.28
SNX13-213ENST00000611725 HDAC9Q9UKV0 1011 aa7.08□□□□□ -1.28
SNX13-213ENST00000611725 DNM3Q9UQ16 869 aa7.08□□□□□ -1.28
SNX13-213ENST00000611725 PDS5AQ29RF7 1337 aaKnown RBP7.08□□□□□ -1.28
SNX13-213ENST00000611725 ATP8B1O43520 1251 aa7.08□□□□□ -1.28
SNX13-213ENST00000611725 FOSP01100 380 aaPredicted RBP7.08□□□□□ -1.28
SNX13-213ENST00000611725 VAV2P52735 878 aa7.08□□□□□ -1.28
SNX13-213ENST00000611725 LRRC41Q15345 812 aa7.08□□□□□ -1.28
SNX13-213ENST00000611725 PRR16Q569H4 304 aa7.08□□□□□ -1.28
SNX13-213ENST00000611725 RCSD1Q6JBY9 416 aa7.08□□□□□ -1.28
SNX13-213ENST00000611725 XRN1Q8IZH2 1706 aaKnown RBP7.08□□□□□ -1.28
SNX13-213ENST00000611725 PARD6BQ9BYG5 372 aa7.08□□□□□ -1.28
SNX13-213ENST00000611725 NDST4Q9H3R1 872 aa7.08□□□□□ -1.28
SNX13-213ENST00000611725 THAP9Q9H5L6 903 aa7.08□□□□□ -1.28
SNX13-213ENST00000611725 GPR75-ASB3A0A0A6YYF3 556 aa7.08□□□□□ -1.28
SNX13-213ENST00000611725 PNMA6AP0CW24 399 aaPredicted RBP7.08□□□□□ -1.28
SNX13-213ENST00000611725 AKR1B1P15121 316 aa7.08□□□□□ -1.28
SNX13-213ENST00000611725 STK4Q13043 487 aa7.08□□□□□ -1.28
SNX13-213ENST00000611725 CERKLQ49MI3 558 aaPredicted RBP7.08□□□□□ -1.28
SNX13-213ENST00000611725 GPBP1Q86WP2 473 aa7.08□□□□□ -1.28
SNX13-213ENST00000611725 TRIM58Q8NG06 486 aa7.08□□□□□ -1.28
SNX13-213ENST00000611725 PSMB7Q99436 277 aa7.08□□□□□ -1.28
SNX13-213ENST00000611725 NUCKS1Q9H1E3 243 aaKnown RBP7.08□□□□□ -1.28
SNX13-213ENST00000611725 CENPHQ9H3R5 247 aa7.08□□□□□ -1.28
SNX13-213ENST00000611725 RIC8AQ9NPQ8 531 aa7.08□□□□□ -1.28
SNX13-213ENST00000611725 ARMCX3Q9UH62 379 aaPredicted RBP7.08□□□□□ -1.28
SNX13-213ENST00000611725 KIAA1024Q9UPX6 916 aa7.08□□□□□ -1.28
SNX13-213ENST00000611725 SAMM50Q9Y512 469 aa7.08□□□□□ -1.28
SNX13-213ENST00000611725 ENC1O14682 589 aa7.08□□□□□ -1.28
SNX13-213ENST00000611725 CFBP00751 764 aa7.08□□□□□ -1.28
SNX13-213ENST00000611725 CAPN2P17655 700 aa7.08□□□□□ -1.28
SNX13-213ENST00000611725 KLHL30Q0D2K2 578 aa7.08□□□□□ -1.28
SNX13-213ENST00000611725 SMC1AQ14683 1233 aaKnown RBP7.08□□□□□ -1.28
SNX13-213ENST00000611725 KCNB1Q14721 858 aa7.08□□□□□ -1.28
SNX13-213ENST00000611725 NCAPH2Q6IBW4 605 aa7.08□□□□□ -1.28
SNX13-213ENST00000611725 TBC1D16Q8TBP0 767 aa7.08□□□□□ -1.28
SNX13-213ENST00000611725 PPP1R1BQ9UD71 204 aaPredicted RBP7.08□□□□□ -1.28
SNX13-213ENST00000611725 SWAP70Q9UH65 585 aa7.08□□□□□ -1.28
SNX13-213ENST00000611725 MED1Q15648 1581 aaPredicted RBP7.08□□□□□ -1.28
SNX13-213ENST00000611725 PDE6BP35913 854 aa7.08□□□□□ -1.28
SNX13-213ENST00000611725 SARSP49591 514 aaKnown RBP7.08□□□□□ -1.28
SNX13-213ENST00000611725 GPSM2P81274 684 aa7.08□□□□□ -1.28
SNX13-213ENST00000611725 SEMA3FQ13275 785 aa7.08□□□□□ -1.28
SNX13-213ENST00000611725 MAN2A1Q16706 1144 aa7.08□□□□□ -1.28
SNX13-213ENST00000611725 PODNQ7Z5L7 613 aa7.08□□□□□ -1.28
SNX13-213ENST00000611725 SYCP3Q8IZU3 236 aa7.08□□□□□ -1.28
SNX13-213ENST00000611725 DHX36Q9H2U1 1008 aaKnown RBP7.08□□□□□ -1.28
SNX13-213ENST00000611725 PPEF1O14829 653 aaPredicted RBP7.07□□□□□ -1.28
SNX13-213ENST00000611725 FAM13AO94988 1023 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms