RNA–Protein interactions for RNA: ENST00000611577.4

MUC1-224, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-224ENST00000611577 REC8O95072 547 aa20.73■□□□□ 0.91
MUC1-224ENST00000611577 TIMP1P01033 207 aa20.73■□□□□ 0.91
MUC1-224ENST00000611577 CCSAPQ6IQ19 270 aaPredicted RBP20.73■□□□□ 0.91
MUC1-224ENST00000611577 RALYLQ86SE5 291 aaKnown RBP20.73■□□□□ 0.91
MUC1-224ENST00000611577 PRPF38AQ8NAV1 312 aaKnown RBP20.73■□□□□ 0.91
MUC1-224ENST00000611577 MTMR4Q9NYA4 1195 aa20.73■□□□□ 0.91
MUC1-224ENST00000611577 TBX21Q9UL17 535 aa20.73■□□□□ 0.91
MUC1-224ENST00000611577 B4E1Z4 1266 aa20.72■□□□□ 0.91
MUC1-224ENST00000611577 CYP21A2P08686 494 aa20.72■□□□□ 0.91
MUC1-224ENST00000611577 C6orf222P0C671 652 aaPredicted RBP20.72■□□□□ 0.91
MUC1-224ENST00000611577 CST5P28325 142 aaPredicted RBP20.72■□□□□ 0.91
MUC1-224ENST00000611577 NT5C2P49902 561 aa20.72■□□□□ 0.91
MUC1-224ENST00000611577 ACVR2BQ13705 512 aa20.72■□□□□ 0.91
MUC1-224ENST00000611577 RNF20Q5VTR2 975 aa20.72■□□□□ 0.91
MUC1-224ENST00000611577 ZNF467Q7Z7K2 595 aaPredicted RBP20.72■□□□□ 0.91
MUC1-224ENST00000611577 IQCA1Q86XH1 822 aa20.72■□□□□ 0.91
MUC1-224ENST00000611577 KIFC2Q96AC6 838 aa20.72■□□□□ 0.91
MUC1-224ENST00000611577 TIFAQ96CG3 184 aa20.72■□□□□ 0.91
MUC1-224ENST00000611577 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.72■□□□□ 0.91
MUC1-224ENST00000611577 RAVER2Q9HCJ3 691 aaKnown RBP20.72■□□□□ 0.91
MUC1-224ENST00000611577 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.72■□□□□ 0.91
MUC1-224ENST00000611577 MROH7Q68CQ1 1323 aa20.72■□□□□ 0.91
MUC1-224ENST00000611577 IGKV6D-41A0A0C4DH26 115 aa20.71■□□□□ 0.91
MUC1-224ENST00000611577 ATP2A1O14983 1001 aa20.71■□□□□ 0.91
MUC1-224ENST00000611577 KDM4AO75164 1064 aa20.71■□□□□ 0.91
MUC1-224ENST00000611577 IRX5P78411 483 aaPredicted RBP20.71■□□□□ 0.91
MUC1-224ENST00000611577 ANKRD35Q8N283 1001 aa20.71■□□□□ 0.91
MUC1-224ENST00000611577 USP38Q8NB14 1042 aa20.71■□□□□ 0.91
MUC1-224ENST00000611577 PCSK9Q8NBP7 692 aaKnown RBP20.71■□□□□ 0.91
MUC1-224ENST00000611577 SYMPKQ92797 1274 aaKnown RBP20.71■□□□□ 0.91
MUC1-224ENST00000611577 VTI1AQ96AJ9 217 aa20.71■□□□□ 0.91
MUC1-224ENST00000611577 ZNF576Q9H609 170 aa20.71■□□□□ 0.91
MUC1-224ENST00000611577 SPC25Q9HBM1 224 aa20.71■□□□□ 0.91
MUC1-224ENST00000611577 ISY1Q9ULR0 285 aaKnown RBP20.71■□□□□ 0.91
MUC1-224ENST00000611577 ELP1O95163 1332 aa20.71■□□□□ 0.91
MUC1-224ENST00000611577 ADCY6O43306 1168 aa20.7■□□□□ 0.9
MUC1-224ENST00000611577 NMT2O60551 498 aa20.7■□□□□ 0.9
MUC1-224ENST00000611577 ASGR1P07306 291 aa20.7■□□□□ 0.9
MUC1-224ENST00000611577 PPIGQ13427 754 aaKnown RBP eCLIP20.7■□□□□ 0.9
MUC1-224ENST00000611577 CCDC144BQ3MJ40 725 aa20.7■□□□□ 0.9
MUC1-224ENST00000611577 MFSD5Q6N075 450 aa20.7■□□□□ 0.9
MUC1-224ENST00000611577 CCDC174Q6PII3 467 aa20.7■□□□□ 0.9
MUC1-224ENST00000611577 LRRC47Q8N1G4 583 aaKnown RBP20.7■□□□□ 0.9
MUC1-224ENST00000611577 SLC38A10Q9HBR0 1119 aa20.7■□□□□ 0.9
MUC1-224ENST00000611577 A0A0U1RQG5 324 aaPredicted RBP20.69■□□□□ 0.9
MUC1-224ENST00000611577 CCDC178Q5BJE1 867 aa20.69■□□□□ 0.9
MUC1-224ENST00000611577 CREB3L3Q68CJ9 461 aa20.69■□□□□ 0.9
MUC1-224ENST00000611577 ARMCX2Q7L311 632 aa20.69■□□□□ 0.9
MUC1-224ENST00000611577 NCOA7Q8NI08 942 aa20.69■□□□□ 0.9
MUC1-224ENST00000611577 FGD4Q96M96 766 aa20.69■□□□□ 0.9
MUC1-224ENST00000611577 ZKSCAN3Q9BRR0 538 aa20.69■□□□□ 0.9
MUC1-224ENST00000611577 UBAC1Q9BSL1 405 aa20.69■□□□□ 0.9
MUC1-224ENST00000611577 UPF3AQ9H1J1 476 aaKnown RBP20.69■□□□□ 0.9
MUC1-224ENST00000611577 ABHD16BQ9H3Z7 469 aa20.69■□□□□ 0.9
MUC1-224ENST00000611577 PRDM6Q9NQX0 595 aa20.69■□□□□ 0.9
MUC1-224ENST00000611577 FBXO40Q9UH90 709 aa20.69■□□□□ 0.9
MUC1-224ENST00000611577 E7EWF7 191 aa20.68■□□□□ 0.9
MUC1-224ENST00000611577 SLC27A2O14975 620 aa20.68■□□□□ 0.9
MUC1-224ENST00000611577 CDK7P50613 346 aa20.68■□□□□ 0.9
MUC1-224ENST00000611577 GJA9P57773 515 aa20.68■□□□□ 0.9
MUC1-224ENST00000611577 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.68■□□□□ 0.9
MUC1-224ENST00000611577 CHST13Q8NET6 341 aa20.68■□□□□ 0.9
MUC1-224ENST00000611577 PPP1R12CQ9BZL4 782 aa20.68■□□□□ 0.9
MUC1-224ENST00000611577 IL17RBQ9NRM6 502 aa20.68■□□□□ 0.9
MUC1-224ENST00000611577 TCP11L1Q9NUJ3 509 aa20.68■□□□□ 0.9
MUC1-224ENST00000611577 FEM1BQ9UK73 627 aa20.68■□□□□ 0.9
MUC1-224ENST00000611577 SYNPO2Q9UMS6 1093 aa20.68■□□□□ 0.9
MUC1-224ENST00000611577 MTMR7Q9Y216 660 aa20.68■□□□□ 0.9
MUC1-224ENST00000611577 ARVCFO00192 962 aa20.67■□□□□ 0.9
MUC1-224ENST00000611577 CSF2RAP15509 400 aa20.67■□□□□ 0.9
MUC1-224ENST00000611577 TJAP1Q5JTD0 557 aa20.67■□□□□ 0.9
MUC1-224ENST00000611577 GNASQ5JWF2 1037 aa20.67■□□□□ 0.9
MUC1-224ENST00000611577 TMEM240Q5SV17 173 aa20.67■□□□□ 0.9
MUC1-224ENST00000611577 C16orf59Q7L2K0 433 aa20.67■□□□□ 0.9
MUC1-224ENST00000611577 TMEM199Q8N511 208 aa20.67■□□□□ 0.9
MUC1-224ENST00000611577 MKL1Q969V6 931 aa20.67■□□□□ 0.9
MUC1-224ENST00000611577 PBX4Q9BYU1 374 aa20.67■□□□□ 0.9
MUC1-224ENST00000611577 HOMER2Q9NSB8 354 aa20.67■□□□□ 0.9
MUC1-224ENST00000611577 ZSWIM5Q9P217 1185 aa20.67■□□□□ 0.9
MUC1-224ENST00000611577 ERICH2A1L162 156 aa20.66■□□□□ 0.9
MUC1-224ENST00000611577 GRXCR1A8MXD5 290 aa20.66■□□□□ 0.9
MUC1-224ENST00000611577 TLR3O15455 904 aaKnown RBP20.66■□□□□ 0.9
MUC1-224ENST00000611577 EIF5BO60841 1220 aaKnown RBP20.66■□□□□ 0.9
MUC1-224ENST00000611577 ACRP10323 421 aa20.66■□□□□ 0.9
MUC1-224ENST00000611577 PBX2P40425 430 aa20.66■□□□□ 0.9
MUC1-224ENST00000611577 OAZ1P54368 228 aa20.66■□□□□ 0.9
MUC1-224ENST00000611577 NECTIN1Q15223 517 aa20.66■□□□□ 0.9
MUC1-224ENST00000611577 PSRC1Q6PGN9 363 aaPredicted RBP20.66■□□□□ 0.9
MUC1-224ENST00000611577 FAM126BQ8IXS8 530 aa20.66■□□□□ 0.9
MUC1-224ENST00000611577 CCDC144CPQ8IYA2 1237 aa20.66■□□□□ 0.9
MUC1-224ENST00000611577 GAS2L1Q99501 681 aaPredicted RBP20.66■□□□□ 0.9
MUC1-224ENST00000611577 MCM3APO60318 1980 aa20.66■□□□□ 0.9
MUC1-224ENST00000611577 MUC3AQ02505 3323 aa20.65■□□□□ 0.9
MUC1-224ENST00000611577 TOP1P11387 765 aaKnown RBP20.65■□□□□ 0.9
MUC1-224ENST00000611577 SART3Q15020 963 aaKnown RBP20.65■□□□□ 0.9
MUC1-224ENST00000611577 RASIP1Q5U651 963 aa20.65■□□□□ 0.9
MUC1-224ENST00000611577 SLFN13Q68D06 897 aa20.65■□□□□ 0.9
MUC1-224ENST00000611577 GMCL1P1Q8NEA9 526 aa20.65■□□□□ 0.9
MUC1-224ENST00000611577 TTC14Q96N46 770 aa20.65■□□□□ 0.9
MUC1-224ENST00000611577 ZSCAN10Q96SZ4 725 aaPredicted RBP20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms