RNA–Protein interactions for RNA: ENST00000611269.4

UBE3C-209, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 2 BASIC

Gene UBE3C, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-209ENST00000611269 USP17L20D6RJB6 530 aa25.45■■□□□ 1.66
UBE3C-209ENST00000611269 GTF2A2P52657 109 aa25.45■■□□□ 1.66
UBE3C-209ENST00000611269 USP17L24Q0WX57 530 aa25.45■■□□□ 1.66
UBE3C-209ENST00000611269 SNW1Q13573 536 aaKnown RBP25.45■■□□□ 1.66
UBE3C-209ENST00000611269 GNL2Q13823 731 aaKnown RBP25.45■■□□□ 1.66
UBE3C-209ENST00000611269 CCDC73Q6ZRK6 1079 aa25.45■■□□□ 1.66
UBE3C-209ENST00000611269 FASTKD5Q7L8L6 764 aaKnown RBP25.45■■□□□ 1.66
UBE3C-209ENST00000611269 TRIM44Q96DX7 344 aaPredicted RBP25.45■■□□□ 1.66
UBE3C-209ENST00000611269 PNMA6FA0A0J9YX94 578 aa25.44■■□□□ 1.66
UBE3C-209ENST00000611269 CTAGE5O15320 804 aa25.44■■□□□ 1.66
UBE3C-209ENST00000611269 FAM160A1Q05DH4 1040 aa25.44■■□□□ 1.66
UBE3C-209ENST00000611269 SLC39A14Q15043 492 aa25.44■■□□□ 1.66
UBE3C-209ENST00000611269 SAFBQ15424 915 aaKnown RBP eCLIP25.44■■□□□ 1.66
UBE3C-209ENST00000611269 SF3A1Q15459 793 aaKnown RBP25.44■■□□□ 1.66
UBE3C-209ENST00000611269 QRICH1Q2TAL8 776 aa25.44■■□□□ 1.66
UBE3C-209ENST00000611269 HEATR3Q7Z4Q2 680 aa25.44■■□□□ 1.66
UBE3C-209ENST00000611269 GOLPH3LQ9H4A5 285 aa25.44■■□□□ 1.66
UBE3C-209ENST00000611269 VPS54Q9P1Q0 977 aa25.44■■□□□ 1.66
UBE3C-209ENST00000611269 PPP1R9AQ9ULJ8 1098 aa25.44■■□□□ 1.66
UBE3C-209ENST00000611269 PPP1R11O60927 126 aaPredicted RBP25.43■■□□□ 1.66
UBE3C-209ENST00000611269 WWC2Q6AWC2 1192 aa25.43■■□□□ 1.66
UBE3C-209ENST00000611269 SHISA4Q96DD7 197 aa25.43■■□□□ 1.66
UBE3C-209ENST00000611269 AGTPBP1Q9UPW5 1226 aa25.43■■□□□ 1.66
UBE3C-209ENST00000611269 CETPP11597 493 aa25.43■■□□□ 1.66
UBE3C-209ENST00000611269 MRPS27Q92552 414 aaKnown RBP25.43■■□□□ 1.66
UBE3C-209ENST00000611269 FOXP1Q9H334 677 aaPredicted RBP25.43■■□□□ 1.66
UBE3C-209ENST00000611269 HOXA7P31268 230 aaPredicted RBP25.42■■□□□ 1.66
UBE3C-209ENST00000611269 NOSTRINQ8IVI9 506 aa25.42■■□□□ 1.66
UBE3C-209ENST00000611269 FSIP1Q8NA03 581 aa25.42■■□□□ 1.66
UBE3C-209ENST00000611269 RANBP17Q9H2T7 1088 aaKnown RBP25.42■■□□□ 1.66
UBE3C-209ENST00000611269 CCL15-CCL14A0A0B4J2E2 113 aa25.41■■□□□ 1.66
UBE3C-209ENST00000611269 TYRO3Q06418 890 aa25.41■■□□□ 1.66
UBE3C-209ENST00000611269 COG2Q14746 738 aa25.41■■□□□ 1.66
UBE3C-209ENST00000611269 CCL15Q16663 113 aa25.41■■□□□ 1.66
UBE3C-209ENST00000611269 GPAT2Q6NUI2 795 aa25.41■■□□□ 1.66
UBE3C-209ENST00000611269 BARHL2Q9NY43 387 aa25.41■■□□□ 1.66
UBE3C-209ENST00000611269 STXBP3O00186 592 aa25.4■■□□□ 1.66
UBE3C-209ENST00000611269 PPP6R2O75170 966 aa25.4■■□□□ 1.66
UBE3C-209ENST00000611269 SLC10A3P09131 477 aa25.4■■□□□ 1.66
UBE3C-209ENST00000611269 TYW1BQ6NUM6 668 aa25.4■■□□□ 1.66
UBE3C-209ENST00000611269 CCDC174Q6PII3 467 aa25.4■■□□□ 1.66
UBE3C-209ENST00000611269 BRI3BPQ8WY22 251 aa25.4■■□□□ 1.66
UBE3C-209ENST00000611269 ATG4CQ96DT6 458 aa25.4■■□□□ 1.66
UBE3C-209ENST00000611269 KCNJ14Q9UNX9 436 aa25.4■■□□□ 1.66
UBE3C-209ENST00000611269 XBP1P17861 261 aa25.4■■□□□ 1.66
UBE3C-209ENST00000611269 DSG3P32926 999 aa25.4■■□□□ 1.66
UBE3C-209ENST00000611269 CKAP2LQ8IYA6 745 aa25.4■■□□□ 1.66
UBE3C-209ENST00000611269 DIS3L2Q8IYB7 885 aaKnown RBP25.4■■□□□ 1.66
UBE3C-209ENST00000611269 FMR1NBQ8N0W7 255 aaPredicted RBP25.4■■□□□ 1.66
UBE3C-209ENST00000611269 COA7Q96BR5 231 aa25.4■■□□□ 1.66
UBE3C-209ENST00000611269 HHIPL1Q96JK4 782 aa25.4■■□□□ 1.66
UBE3C-209ENST00000611269 COL11A1P12107 1806 aaPredicted RBP25.39■■□□□ 1.66
UBE3C-209ENST00000611269 BTBD18B2RXH4 712 aa25.39■■□□□ 1.66
UBE3C-209ENST00000611269 APLP1P51693 650 aa25.39■■□□□ 1.66
UBE3C-209ENST00000611269 PTPAQ15257 358 aa25.39■■□□□ 1.66
UBE3C-209ENST00000611269 HS1BP3Q53T59 392 aa25.39■■□□□ 1.66
UBE3C-209ENST00000611269 AXDND1Q5T1B0 1012 aaPredicted RBP25.39■■□□□ 1.66
UBE3C-209ENST00000611269 EIF4ENIF1Q9NRA8 985 aaKnown RBP25.39■■□□□ 1.66
UBE3C-209ENST00000611269 MRVI1Q9Y6F6 885 aa25.39■■□□□ 1.66
UBE3C-209ENST00000611269 SMCHD1A6NHR9 2005 aa25.38■■□□□ 1.65
UBE3C-209ENST00000611269 SPDYE16A6NNV3 312 aaPredicted RBP25.38■■□□□ 1.65
UBE3C-209ENST00000611269 FAM155AB1AL88 458 aaPredicted RBP25.38■■□□□ 1.65
UBE3C-209ENST00000611269 VWA5AO00534 786 aa25.38■■□□□ 1.65
UBE3C-209ENST00000611269 KINO60870 393 aaKnown RBP25.38■■□□□ 1.65
UBE3C-209ENST00000611269 CMA1P23946 247 aa25.38■■□□□ 1.65
UBE3C-209ENST00000611269 JMYQ8N9B5 988 aa25.38■■□□□ 1.65
UBE3C-209ENST00000611269 SLC38A10Q9HBR0 1119 aa25.38■■□□□ 1.65
UBE3C-209ENST00000611269 SH3GLB2Q9NR46 395 aa25.38■■□□□ 1.65
UBE3C-209ENST00000611269 HOXC10Q9NYD6 342 aa25.38■■□□□ 1.65
UBE3C-209ENST00000611269 NAPAP54920 295 aa25.38■■□□□ 1.65
UBE3C-209ENST00000611269 IRX3P78415 501 aaPredicted RBP25.38■■□□□ 1.65
UBE3C-209ENST00000611269 SASS6Q6UVJ0 657 aa25.38■■□□□ 1.65
UBE3C-209ENST00000611269 FBXO11Q86XK2 927 aa25.38■■□□□ 1.65
UBE3C-209ENST00000611269 CCDC102AQ96A19 550 aa25.38■■□□□ 1.65
UBE3C-209ENST00000611269 AMNQ9BXJ7 453 aa25.38■■□□□ 1.65
UBE3C-209ENST00000611269 ASCC2Q9H1I8 757 aaPredicted RBP25.38■■□□□ 1.65
UBE3C-209ENST00000611269 CREBZFQ9NS37 354 aa25.38■■□□□ 1.65
UBE3C-209ENST00000611269 ADAMTS5Q9UNA0 930 aa25.38■■□□□ 1.65
UBE3C-209ENST00000611269 PCDHA1Q9Y5I3 950 aa25.38■■□□□ 1.65
UBE3C-209ENST00000611269 MYPNQ86TC9 1320 aa25.38■■□□□ 1.65
UBE3C-209ENST00000611269 hCG_1984214I3L0E3 225 aa25.37■■□□□ 1.65
UBE3C-209ENST00000611269 TAL1P17542 331 aaPredicted RBP25.37■■□□□ 1.65
UBE3C-209ENST00000611269 PABPC4Q13310 644 aaKnown RBP eCLIP25.37■■□□□ 1.65
UBE3C-209ENST00000611269 USH1GQ495M9 461 aa25.37■■□□□ 1.65
UBE3C-209ENST00000611269 ZNF713Q8N859 430 aaPredicted RBP25.37■■□□□ 1.65
UBE3C-209ENST00000611269 PHF20Q9BVI0 1012 aa25.37■■□□□ 1.65
UBE3C-209ENST00000611269 BTBD19C9JJ37 291 aa25.36■■□□□ 1.65
UBE3C-209ENST00000611269 PAXIP1Q6ZW49 1069 aaPredicted RBP25.36■■□□□ 1.65
UBE3C-209ENST00000611269 P2RX7Q99572 595 aaKnown RBP25.36■■□□□ 1.65
UBE3C-209ENST00000611269 ZNF536O15090 1300 aa25.36■■□□□ 1.65
UBE3C-209ENST00000611269 ZBED4O75132 1171 aa25.36■■□□□ 1.65
UBE3C-209ENST00000611269 CAVIN2O95810 425 aa25.36■■□□□ 1.65
UBE3C-209ENST00000611269 FDX1P10109 184 aa25.36■■□□□ 1.65
UBE3C-209ENST00000611269 RILPL1Q5EBL4 403 aa25.36■■□□□ 1.65
UBE3C-209ENST00000611269 CCDC148Q8NFR7 591 aa25.36■■□□□ 1.65
UBE3C-209ENST00000611269 FAM200AQ8TCP9 573 aa25.36■■□□□ 1.65
UBE3C-209ENST00000611269 PTPN18Q99952 460 aa25.36■■□□□ 1.65
UBE3C-209ENST00000611269 CTDP1Q9Y5B0 961 aaPredicted RBP25.36■■□□□ 1.65
UBE3C-209ENST00000611269 NLRP5P59047 1200 aa25.35■■□□□ 1.65
UBE3C-209ENST00000611269 GRM1Q13255 1194 aa25.35■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms