RNA–Protein interactions for RNA: ENST00000611152.1

TUBGCP3-207, Transcript of tubulin gamma complex associated protein 3, humanhuman

TSL 3

Gene TUBGCP3, Length 1,508 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3-207ENST00000611152 FILIP1Q7Z7B0 1213 aa18.21■□□□□ 0.51
TUBGCP3-207ENST00000611152 IGSF22Q8N9C0 903 aa18.21■□□□□ 0.51
TUBGCP3-207ENST00000611152 TBCKQ8TEA7 893 aa18.21■□□□□ 0.51
TUBGCP3-207ENST00000611152 GLT8D2Q9H1C3 349 aa18.21■□□□□ 0.51
TUBGCP3-207ENST00000611152 VAT1LQ9HCJ6 419 aa18.21■□□□□ 0.51
TUBGCP3-207ENST00000611152 GPCPD1Q9NPB8 672 aa18.21■□□□□ 0.51
TUBGCP3-207ENST00000611152 RMND1Q9NWS8 449 aa18.21■□□□□ 0.51
TUBGCP3-207ENST00000611152 EEF2P13639 858 aaKnown RBP18.2■□□□□ 0.5
TUBGCP3-207ENST00000611152 CACNB3P54284 484 aa18.2■□□□□ 0.5
TUBGCP3-207ENST00000611152 EIF6P56537 245 aaKnown RBP18.2■□□□□ 0.5
TUBGCP3-207ENST00000611152 FKBP1CQ5VVH2 108 aa18.2■□□□□ 0.5
TUBGCP3-207ENST00000611152 TMC6Q7Z403 805 aa18.2■□□□□ 0.5
TUBGCP3-207ENST00000611152 MTMR14Q8NCE2 650 aa18.2■□□□□ 0.5
TUBGCP3-207ENST00000611152 GMCL1Q96IK5 515 aa18.2■□□□□ 0.5
TUBGCP3-207ENST00000611152 PRMT6Q96LA8 375 aaPredicted RBP18.2■□□□□ 0.5
TUBGCP3-207ENST00000611152 R3HCC1Q9Y3T6 440 aaKnown RBP18.2■□□□□ 0.5
TUBGCP3-207ENST00000611152 SPDYE2BA6NHP3 402 aa18.19■□□□□ 0.5
TUBGCP3-207ENST00000611152 SPDYE6P0CI01 402 aa18.19■□□□□ 0.5
TUBGCP3-207ENST00000611152 SKILP12757 684 aa18.19■□□□□ 0.5
TUBGCP3-207ENST00000611152 FXR2P51116 673 aaKnown RBP eCLIP18.19■□□□□ 0.58e-7■■■■□ 25.7
TUBGCP3-207ENST00000611152 ZNF658Q5TYW1 1059 aaPredicted RBP18.19■□□□□ 0.5
TUBGCP3-207ENST00000611152 PPP4R3AQ6IN85 833 aa18.19■□□□□ 0.5
TUBGCP3-207ENST00000611152 TTBK2Q6IQ55 1244 aa18.19■□□□□ 0.5
TUBGCP3-207ENST00000611152 TEX2Q8IWB9 1127 aa18.19■□□□□ 0.5
TUBGCP3-207ENST00000611152 TMX1Q9H3N1 280 aa18.19■□□□□ 0.5
TUBGCP3-207ENST00000611152 A0A1B0GTH6 734 aa18.18■□□□□ 0.5
TUBGCP3-207ENST00000611152 SLURP2P0DP57 97 aa18.18■□□□□ 0.5
TUBGCP3-207ENST00000611152 CASP1P29466 404 aa18.18■□□□□ 0.5
TUBGCP3-207ENST00000611152 UBA7P41226 1012 aa18.18■□□□□ 0.5
TUBGCP3-207ENST00000611152 STAT6P42226 847 aa18.18■□□□□ 0.5
TUBGCP3-207ENST00000611152 PRELPP51888 382 aa18.18■□□□□ 0.5
TUBGCP3-207ENST00000611152 TCP10Q12799 353 aa18.18■□□□□ 0.5
TUBGCP3-207ENST00000611152 KARSQ15046 597 aaKnown RBP18.18■□□□□ 0.5
TUBGCP3-207ENST00000611152 BTNL9Q6UXG8 535 aa18.18■□□□□ 0.5
TUBGCP3-207ENST00000611152 COA7Q96BR5 231 aa18.18■□□□□ 0.5
TUBGCP3-207ENST00000611152 TDRD3Q9H7E2 651 aaKnown RBP18.18■□□□□ 0.5
TUBGCP3-207ENST00000611152 RNF181Q9P0P0 153 aa18.18■□□□□ 0.5
TUBGCP3-207ENST00000611152 BIN2Q9UBW5 565 aaPredicted RBP18.18■□□□□ 0.5
TUBGCP3-207ENST00000611152 HERC5Q9UII4 1024 aaKnown RBP18.18■□□□□ 0.5
TUBGCP3-207ENST00000611152 ZNRF3Q9ULT6 936 aa18.18■□□□□ 0.5
TUBGCP3-207ENST00000611152 MYH7BA7E2Y1 1941 aa18.18■□□□□ 0.5
TUBGCP3-207ENST00000611152 USP17L10C9JJH3 530 aa18.18■□□□□ 0.5
TUBGCP3-207ENST00000611152 MPHOSPH10O00566 681 aaKnown RBP18.18■□□□□ 0.5
TUBGCP3-207ENST00000611152 KLRC4O43908 158 aa18.18■□□□□ 0.5
TUBGCP3-207ENST00000611152 CCNT1O60563 726 aaKnown RBP18.18■□□□□ 0.5
TUBGCP3-207ENST00000611152 SERPINC1P01008 464 aa18.18■□□□□ 0.5
TUBGCP3-207ENST00000611152 RPN1P04843 607 aaKnown RBP18.18■□□□□ 0.5
TUBGCP3-207ENST00000611152 RBM5P52756 815 aaKnown RBP eCLIP18.18■□□□□ 0.5
TUBGCP3-207ENST00000611152 NR1I3Q14994 352 aa18.18■□□□□ 0.5
TUBGCP3-207ENST00000611152 LETM2Q2VYF4 491 aa18.18■□□□□ 0.5
TUBGCP3-207ENST00000611152 JAKMIP3Q5VZ66 844 aa18.18■□□□□ 0.5
TUBGCP3-207ENST00000611152 RRAGBQ5VZM2 374 aa18.18■□□□□ 0.5
TUBGCP3-207ENST00000611152 LRRC15Q8TF66 581 aa18.18■□□□□ 0.5
TUBGCP3-207ENST00000611152 TMEM260Q9NX78 707 aa18.18■□□□□ 0.5
TUBGCP3-207ENST00000611152 RWDD2AQ9UIY3 292 aa18.18■□□□□ 0.5
TUBGCP3-207ENST00000611152 SYNRGQ9UMZ2 1314 aa18.17■□□□□ 0.5
TUBGCP3-207ENST00000611152 LRRC10BA6NIK2 292 aa18.17■□□□□ 0.5
TUBGCP3-207ENST00000611152 GTF2F1P35269 517 aaKnown RBP eCLIP18.17■□□□□ 0.5
TUBGCP3-207ENST00000611152 MMP14P50281 582 aa18.17■□□□□ 0.5
TUBGCP3-207ENST00000611152 MRPL12P52815 198 aaKnown RBP18.17■□□□□ 0.5
TUBGCP3-207ENST00000611152 PDIA5Q14554 519 aa18.17■□□□□ 0.5
TUBGCP3-207ENST00000611152 SEPT2Q15019 361 aa18.17■□□□□ 0.5
TUBGCP3-207ENST00000611152 ABCB5Q2M3G0 1257 aa18.17■□□□□ 0.5
TUBGCP3-207ENST00000611152 SLFN13Q68D06 897 aa18.17■□□□□ 0.5
TUBGCP3-207ENST00000611152 NYAP1Q6ZVC0 841 aa18.17■□□□□ 0.5
TUBGCP3-207ENST00000611152 TRMT44Q8IYL2 757 aaKnown RBP18.17■□□□□ 0.5
TUBGCP3-207ENST00000611152 CUL5Q93034 780 aa18.17■□□□□ 0.5
TUBGCP3-207ENST00000611152 ZBED3Q96IU2 234 aaPredicted RBP18.17■□□□□ 0.5
TUBGCP3-207ENST00000611152 MBOAT7Q96N66 472 aa18.17■□□□□ 0.5
TUBGCP3-207ENST00000611152 MMTAG2Q9BU76 263 aaKnown RBP18.17■□□□□ 0.5
TUBGCP3-207ENST00000611152 GTPBP4Q9BZE4 634 aaKnown RBP18.17■□□□□ 0.5
TUBGCP3-207ENST00000611152 PP2D1A8MPX8 630 aa18.16■□□□□ 0.5
TUBGCP3-207ENST00000611152 RHOBTB3O94955 611 aa18.16■□□□□ 0.5
TUBGCP3-207ENST00000611152 GCFC2P16383 781 aaKnown RBP18.16■□□□□ 0.5
TUBGCP3-207ENST00000611152 SFPQP23246 707 aaKnown RBP eCLIP18.16■□□□□ 0.5
TUBGCP3-207ENST00000611152 PBX1P40424 430 aa18.16■□□□□ 0.5
TUBGCP3-207ENST00000611152 ICA1Q05084 483 aa18.16■□□□□ 0.5
TUBGCP3-207ENST00000611152 CCDC96Q2M329 555 aa18.16■□□□□ 0.5
TUBGCP3-207ENST00000611152 SPDYE2Q495Y8 402 aa18.16■□□□□ 0.5
TUBGCP3-207ENST00000611152 C9orf131Q5VYM1 1079 aa18.16■□□□□ 0.5
TUBGCP3-207ENST00000611152 CABP7Q86V35 215 aa18.16■□□□□ 0.5
TUBGCP3-207ENST00000611152 CCDC112Q8NEF3 446 aa18.16■□□□□ 0.5
TUBGCP3-207ENST00000611152 MYRIPQ8NFW9 859 aa18.16■□□□□ 0.5
TUBGCP3-207ENST00000611152 FAM151AQ8WW52 585 aa18.16■□□□□ 0.5
TUBGCP3-207ENST00000611152 NAP1L4Q99733 375 aaKnown RBP18.16■□□□□ 0.5
TUBGCP3-207ENST00000611152 C7orf25Q9BPX7 421 aa18.16■□□□□ 0.5
TUBGCP3-207ENST00000611152 SAMSN1Q9NSI8 373 aaKnown RBP18.16■□□□□ 0.5
TUBGCP3-207ENST00000611152 CNTNAP1P78357 1384 aa18.16■□□□□ 0.5
TUBGCP3-207ENST00000611152 FAM196BA6NMK8 535 aa18.15■□□□□ 0.5
TUBGCP3-207ENST00000611152 TMEM232C9JQI7 657 aa18.15■□□□□ 0.5
TUBGCP3-207ENST00000611152 SLC26A4O43511 780 aa18.15■□□□□ 0.5
TUBGCP3-207ENST00000611152 CDC25AP30304 524 aa18.15■□□□□ 0.5
TUBGCP3-207ENST00000611152 JAG1P78504 1218 aa18.15■□□□□ 0.5
TUBGCP3-207ENST00000611152 SHROOM1Q2M3G4 852 aaPredicted RBP18.15■□□□□ 0.5
TUBGCP3-207ENST00000611152 QRICH1Q2TAL8 776 aa18.15■□□□□ 0.5
TUBGCP3-207ENST00000611152 COBLL1Q53SF7 1204 aa18.15■□□□□ 0.5
TUBGCP3-207ENST00000611152 MCTP2Q6DN12 878 aa18.15■□□□□ 0.5
TUBGCP3-207ENST00000611152 CNNM4Q6P4Q7 775 aa18.15■□□□□ 0.5
TUBGCP3-207ENST00000611152 KCTD1Q719H9 257 aa18.15■□□□□ 0.5
TUBGCP3-207ENST00000611152 POTEDQ86YR6 584 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms