RNA–Protein interactions for RNA: ENST00000610907.1

PABPC1-224, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 1 (best) BASIC

Gene PABPC1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-224ENST00000610907 MAP3K9P80192 1104 aa11.73□□□□□ -0.53
PABPC1-224ENST00000610907 PTPN21Q16825 1174 aa11.73□□□□□ -0.53
PABPC1-224ENST00000610907 SMAP1Q8IYB5 467 aaPredicted RBP11.73□□□□□ -0.53
PABPC1-224ENST00000610907 TBCKQ8TEA7 893 aa11.73□□□□□ -0.53
PABPC1-224ENST00000610907 NAP1L4Q99733 375 aaKnown RBP11.73□□□□□ -0.53
PABPC1-224ENST00000610907 LRRC27Q9C0I9 530 aa11.73□□□□□ -0.53
PABPC1-224ENST00000610907 USP40Q9NVE5 1235 aa11.73□□□□□ -0.53
PABPC1-224ENST00000610907 STK17AQ9UEE5 414 aa11.73□□□□□ -0.53
PABPC1-224ENST00000610907 TTF2Q9UNY4 1162 aaKnown RBP11.73□□□□□ -0.53
PABPC1-224ENST00000610907 MTMR7Q9Y216 660 aa11.73□□□□□ -0.53
PABPC1-224ENST00000610907 GDAQ9Y2T3 454 aa11.73□□□□□ -0.53
PABPC1-224ENST00000610907 PARP3Q9Y6F1 533 aa11.73□□□□□ -0.53
PABPC1-224ENST00000610907 NRXN2Q9P2S2 1712 aa11.73□□□□□ -0.53
PABPC1-224ENST00000610907 URI1O94763 535 aaPredicted RBP11.72□□□□□ -0.53
PABPC1-224ENST00000610907 GYPCP04921 128 aa11.72□□□□□ -0.53
PABPC1-224ENST00000610907 PLCG1P19174 1290 aa11.72□□□□□ -0.53
PABPC1-224ENST00000610907 TUBB4BP68371 445 aa11.72□□□□□ -0.53
PABPC1-224ENST00000610907 ZNF543Q08ER8 600 aa11.72□□□□□ -0.53
PABPC1-224ENST00000610907 NAA30Q147X3 362 aaPredicted RBP11.72□□□□□ -0.53
PABPC1-224ENST00000610907 TMEM266Q2M3C6 531 aa11.72□□□□□ -0.53
PABPC1-224ENST00000610907 PPP4R3AQ6IN85 833 aa11.72□□□□□ -0.53
PABPC1-224ENST00000610907 CYP26C1Q6V0L0 522 aa11.72□□□□□ -0.53
PABPC1-224ENST00000610907 DPP8Q6V1X1 898 aaPredicted RBP11.72□□□□□ -0.53
PABPC1-224ENST00000610907 PODNQ7Z5L7 613 aa11.72□□□□□ -0.53
PABPC1-224ENST00000610907 FAM114A1Q8IWE2 563 aa11.72□□□□□ -0.53
PABPC1-224ENST00000610907 MNS1Q8NEH6 495 aa11.72□□□□□ -0.53
PABPC1-224ENST00000610907 UBXN4Q92575 508 aa11.72□□□□□ -0.53
PABPC1-224ENST00000610907 TEKT1Q969V4 418 aa11.72□□□□□ -0.53
PABPC1-224ENST00000610907 MTMR9Q96QG7 549 aa11.72□□□□□ -0.53
PABPC1-224ENST00000610907 TRIM9Q9C026 710 aa11.72□□□□□ -0.53
PABPC1-224ENST00000610907 VAT1LQ9HCJ6 419 aa11.72□□□□□ -0.53
PABPC1-224ENST00000610907 RIC8AQ9NPQ8 531 aa11.72□□□□□ -0.53
PABPC1-224ENST00000610907 MAGEC2Q9UBF1 373 aaPredicted RBP11.72□□□□□ -0.53
PABPC1-224ENST00000610907 DDX41Q9UJV9 622 aaKnown RBP11.72□□□□□ -0.53
PABPC1-224ENST00000610907 PVALEFA0A1B0GWK0 134 aa11.71□□□□□ -0.53
PABPC1-224ENST00000610907 PP2D1A8MPX8 630 aa11.71□□□□□ -0.53
PABPC1-224ENST00000610907 LGALS16A8MUM7 142 aa11.71□□□□□ -0.53
PABPC1-224ENST00000610907 RIMBP2O15034 1052 aa11.71□□□□□ -0.53
PABPC1-224ENST00000610907 PLSCR1O15162 318 aa11.71□□□□□ -0.53
PABPC1-224ENST00000610907 SLC26A4O43511 780 aa11.71□□□□□ -0.53
PABPC1-224ENST00000610907 NPM3O75607 178 aaKnown RBP11.71□□□□□ -0.53
PABPC1-224ENST00000610907 TRIM37O94972 964 aa11.71□□□□□ -0.53
PABPC1-224ENST00000610907 AKR1B1P15121 316 aa11.71□□□□□ -0.53
PABPC1-224ENST00000610907 CCNE1P24864 410 aa11.71□□□□□ -0.53
PABPC1-224ENST00000610907 CCT6AP40227 531 aaKnown RBP11.71□□□□□ -0.53
PABPC1-224ENST00000610907 DNM2P50570 870 aa11.71□□□□□ -0.53
PABPC1-224ENST00000610907 MRPL12P52815 198 aaKnown RBP11.71□□□□□ -0.53
PABPC1-224ENST00000610907 HDLBPQ00341 1268 aaKnown RBP11.71□□□□□ -0.53
PABPC1-224ENST00000610907 PICALMQ13492 652 aa11.71□□□□□ -0.53
PABPC1-224ENST00000610907 ELF2Q15723 593 aa11.71□□□□□ -0.53
PABPC1-224ENST00000610907 TTI2Q6NXR4 508 aa11.71□□□□□ -0.53
PABPC1-224ENST00000610907 CNNM4Q6P4Q7 775 aa11.71□□□□□ -0.53
PABPC1-224ENST00000610907 IRF2BP1Q8IU81 584 aa11.71□□□□□ -0.53
PABPC1-224ENST00000610907 PROM2Q8N271 834 aa11.71□□□□□ -0.53
PABPC1-224ENST00000610907 CERS5Q8N5B7 392 aa11.71□□□□□ -0.53
PABPC1-224ENST00000610907 RETREG2Q8NC44 543 aa11.71□□□□□ -0.53
PABPC1-224ENST00000610907 CPLX3Q8WVH0 158 aa11.71□□□□□ -0.53
PABPC1-224ENST00000610907 IQCDQ96DY2 449 aa11.71□□□□□ -0.53
PABPC1-224ENST00000610907 MASTLQ96GX5 879 aa11.71□□□□□ -0.53
PABPC1-224ENST00000610907 NUP58Q9BVL2 599 aa11.71□□□□□ -0.53
PABPC1-224ENST00000610907 UBA5Q9GZZ9 404 aa11.71□□□□□ -0.53
PABPC1-224ENST00000610907 VPS16Q9H269 839 aa11.71□□□□□ -0.53
PABPC1-224ENST00000610907 DHX36Q9H2U1 1008 aaKnown RBP11.71□□□□□ -0.53
PABPC1-224ENST00000610907 CPVLQ9H3G5 476 aa11.71□□□□□ -0.53
PABPC1-224ENST00000610907 ABHD10Q9NUJ1 306 aa11.71□□□□□ -0.53
PABPC1-224ENST00000610907 EXOC1Q9NV70 894 aa11.71□□□□□ -0.53
PABPC1-224ENST00000610907 MYO1AQ9UBC5 1043 aa11.71□□□□□ -0.53
PABPC1-224ENST00000610907 BIN2Q9UBW5 565 aaPredicted RBP11.71□□□□□ -0.53
PABPC1-224ENST00000610907 ANKRD31Q8N7Z5 1873 aa11.71□□□□□ -0.54
PABPC1-224ENST00000610907 SOWAHDA6NJG2 315 aa11.71□□□□□ -0.54
PABPC1-224ENST00000610907 G3V3G9 751 aa11.71□□□□□ -0.54
PABPC1-224ENST00000610907 KIF5CO60282 957 aa11.71□□□□□ -0.54
PABPC1-224ENST00000610907 H2AFXP16104 143 aaPredicted RBP11.71□□□□□ -0.54
PABPC1-224ENST00000610907 GCFC2P16383 781 aaKnown RBP11.71□□□□□ -0.54
PABPC1-224ENST00000610907 TECP42680 631 aa11.71□□□□□ -0.54
PABPC1-224ENST00000610907 FXR1P51114 621 aaKnown RBP eCLIP11.71□□□□□ -0.54
PABPC1-224ENST00000610907 UBXN1Q04323 297 aa11.71□□□□□ -0.54
PABPC1-224ENST00000610907 CALCRLQ16602 461 aa11.71□□□□□ -0.54
PABPC1-224ENST00000610907 DCAF8Q5TAQ9 597 aa11.71□□□□□ -0.54
PABPC1-224ENST00000610907 JAKMIP3Q5VZ66 844 aa11.71□□□□□ -0.54
PABPC1-224ENST00000610907 MCTP2Q6DN12 878 aa11.71□□□□□ -0.54
PABPC1-224ENST00000610907 CDC42EP5Q6NZY7 148 aa11.71□□□□□ -0.54
PABPC1-224ENST00000610907 FOXR2Q6PJQ5 311 aa11.71□□□□□ -0.54
PABPC1-224ENST00000610907 RAD9BQ6WBX8 426 aa11.71□□□□□ -0.54
PABPC1-224ENST00000610907 SV2BQ7L1I2 683 aa11.71□□□□□ -0.54
PABPC1-224ENST00000610907 MB21D1Q8N884 522 aa11.71□□□□□ -0.54
PABPC1-224ENST00000610907 ZNF507Q8TCN5 953 aa11.71□□□□□ -0.54
PABPC1-224ENST00000610907 P2RX5Q93086 422 aa11.71□□□□□ -0.54
PABPC1-224ENST00000610907 MTMR8Q96EF0 704 aa11.71□□□□□ -0.54
PABPC1-224ENST00000610907 TRIM47Q96LD4 638 aa11.71□□□□□ -0.54
PABPC1-224ENST00000610907 NUP88Q99567 741 aaPredicted RBP11.71□□□□□ -0.54
PABPC1-224ENST00000610907 JMJD4Q9H9V9 463 aa11.71□□□□□ -0.54
PABPC1-224ENST00000610907 DDX4Q9NQI0 724 aaKnown RBP11.71□□□□□ -0.54
PABPC1-224ENST00000610907 ARGLU1Q9NWB6 273 aaPredicted RBP11.71□□□□□ -0.54
PABPC1-224ENST00000610907 TAB2Q9NYJ8 693 aa11.71□□□□□ -0.54
PABPC1-224ENST00000610907 LRWD1Q9UFC0 647 aa11.71□□□□□ -0.54
PABPC1-224ENST00000610907 SOCS7O14512 581 aa11.7□□□□□ -0.54
PABPC1-224ENST00000610907 TADA3O75528 432 aa11.7□□□□□ -0.54
PABPC1-224ENST00000610907 SHMT1P34896 483 aa11.7□□□□□ -0.54
PABPC1-224ENST00000610907 CLK2P49760 499 aaKnown RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms