RNA–Protein interactions for RNA: ENST00000609104.5

USP6NL-205, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP6NL, Length 11,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-205ENST00000609104 NOP9Q86U38 636 aaKnown RBP14.28□□□□□ -0.12
USP6NL-205ENST00000609104 BRD1O95696 1058 aa14.27□□□□□ -0.12
USP6NL-205ENST00000609104 SH3BGRP55822 239 aaPredicted RBP14.27□□□□□ -0.12
USP6NL-205ENST00000609104 TCP11Q8WWU5 503 aa14.27□□□□□ -0.12
USP6NL-205ENST00000609104 MAPKBP1O60336 1514 aa14.27□□□□□ -0.12
USP6NL-205ENST00000609104 GNGT2O14610 69 aa14.27□□□□□ -0.12
USP6NL-205ENST00000609104 SEC31AO94979 1220 aaKnown RBP14.27□□□□□ -0.12
USP6NL-205ENST00000609104 SLC12A1Q13621 1099 aa14.27□□□□□ -0.12
USP6NL-205ENST00000609104 XKR9Q5GH70 373 aa14.27□□□□□ -0.12
USP6NL-205ENST00000609104 MLXIPQ9HAP2 919 aa14.27□□□□□ -0.12
USP6NL-205ENST00000609104 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.27□□□□□ -0.12
USP6NL-205ENST00000609104 TPCN1Q9ULQ1 816 aa14.27□□□□□ -0.12
USP6NL-205ENST00000609104 H0YIN7 160 aa14.27□□□□□ -0.12
USP6NL-205ENST00000609104 CXCR5P32302 372 aa14.27□□□□□ -0.12
USP6NL-205ENST00000609104 ADCY1Q08828 1119 aa14.27□□□□□ -0.12
USP6NL-205ENST00000609104 ADAM9Q13443 819 aa14.27□□□□□ -0.12
USP6NL-205ENST00000609104 TMTC3Q6ZXV5 915 aa14.27□□□□□ -0.12
USP6NL-205ENST00000609104 SESTD1Q86VW0 696 aa14.27□□□□□ -0.12
USP6NL-205ENST00000609104 NCKAP5LQ9HCH0 1330 aa14.27□□□□□ -0.12
USP6NL-205ENST00000609104 UBAP1LF5GYI3 381 aa14.27□□□□□ -0.13
USP6NL-205ENST00000609104 LMNB1P20700 586 aa14.27□□□□□ -0.13
USP6NL-205ENST00000609104 LRRC47Q8N1G4 583 aaKnown RBP14.27□□□□□ -0.13
USP6NL-205ENST00000609104 KCNG1Q9UIX4 513 aa14.27□□□□□ -0.13
USP6NL-205ENST00000609104 UHRF1BP1LA0JNW5 1464 aa14.27□□□□□ -0.13
USP6NL-205ENST00000609104 PTH1RQ03431 593 aa14.27□□□□□ -0.13
USP6NL-205ENST00000609104 C2orf54Q08AI8 447 aa14.27□□□□□ -0.13
USP6NL-205ENST00000609104 PTGDRQ13258 359 aa14.27□□□□□ -0.13
USP6NL-205ENST00000609104 CDKL2Q92772 493 aa14.27□□□□□ -0.13
USP6NL-205ENST00000609104 SYMPKQ92797 1274 aaKnown RBP14.27□□□□□ -0.13
USP6NL-205ENST00000609104 YWHAGP61981 247 aaKnown RBP eCLIP14.27□□□□□ -0.13
USP6NL-205ENST00000609104 GOLGA8FQ08AF8 430 aa14.27□□□□□ -0.13
USP6NL-205ENST00000609104 GOLGA8DPQ0D2H9 430 aa14.27□□□□□ -0.13
USP6NL-205ENST00000609104 SLC35F6Q8N357 371 aa14.27□□□□□ -0.13
USP6NL-205ENST00000609104 CHMP6Q96FZ7 201 aa14.27□□□□□ -0.13
USP6NL-205ENST00000609104 PCDHB4Q9Y5E5 795 aa14.27□□□□□ -0.13
USP6NL-205ENST00000609104 MAP3K19Q56UN5 1328 aa14.27□□□□□ -0.13
USP6NL-205ENST00000609104 ETF1P62495 437 aaKnown RBP14.26□□□□□ -0.13
USP6NL-205ENST00000609104 SPATA1Q5VX52 437 aa14.26□□□□□ -0.13
USP6NL-205ENST00000609104 ANKRD13CQ8N6S4 541 aa14.26□□□□□ -0.13
USP6NL-205ENST00000609104 CSRNP1Q96S65 589 aa14.26□□□□□ -0.13
USP6NL-205ENST00000609104 ATP8A2Q9NTI2 1148 aa14.26□□□□□ -0.13
USP6NL-205ENST00000609104 NRBP1Q9UHY1 535 aa14.26□□□□□ -0.13
USP6NL-205ENST00000609104 EIF4G3O43432 1585 aaKnown RBP14.26□□□□□ -0.13
USP6NL-205ENST00000609104 N4BP1O75113 896 aaKnown RBP14.26□□□□□ -0.13
USP6NL-205ENST00000609104 TMOD1P28289 359 aa14.26□□□□□ -0.13
USP6NL-205ENST00000609104 LCA5Q86VQ0 697 aa14.26□□□□□ -0.13
USP6NL-205ENST00000609104 EPB41L5Q9HCM4 733 aa14.26□□□□□ -0.13
USP6NL-205ENST00000609104 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.26□□□□□ -0.13
USP6NL-205ENST00000609104 ZNF500O60304 480 aaPredicted RBP14.26□□□□□ -0.13
USP6NL-205ENST00000609104 RNF8O76064 485 aa14.26□□□□□ -0.13
USP6NL-205ENST00000609104 USP40Q9NVE5 1235 aa14.26□□□□□ -0.13
USP6NL-205ENST00000609104 ADD1P35611 737 aaKnown RBP14.26□□□□□ -0.13
USP6NL-205ENST00000609104 GCKRQ14397 625 aa14.26□□□□□ -0.13
USP6NL-205ENST00000609104 CNOT6LQ96LI5 555 aaKnown RBP14.26□□□□□ -0.13
USP6NL-205ENST00000609104 ANLNQ9NQW6 1124 aa14.26□□□□□ -0.13
USP6NL-205ENST00000609104 SYCP2Q9BX26 1530 aa14.26□□□□□ -0.13
USP6NL-205ENST00000609104 A6NJR5 290 aa14.26□□□□□ -0.13
USP6NL-205ENST00000609104 OR52Z1P0C646 297 aa14.26□□□□□ -0.13
USP6NL-205ENST00000609104 RFX6Q8HWS3 928 aa14.26□□□□□ -0.13
USP6NL-205ENST00000609104 CCNL1Q9UK58 526 aaPredicted RBP14.26□□□□□ -0.13
USP6NL-205ENST00000609104 THRAP3Q9Y2W1 955 aaKnown RBP14.26□□□□□ -0.13
USP6NL-205ENST00000609104 USP17L12C9JPN9 530 aa14.26□□□□□ -0.13
USP6NL-205ENST00000609104 USP17L21D6R901 530 aa14.26□□□□□ -0.13
USP6NL-205ENST00000609104 PFDN6O15212 129 aa14.26□□□□□ -0.13
USP6NL-205ENST00000609104 FAM133BQ5BKY9 247 aaKnown RBP14.26□□□□□ -0.13
USP6NL-205ENST00000609104 GPKOWQ92917 476 aaPredicted RBP eCLIP14.26□□□□□ -0.131e-6■■■□□ 16.1
USP6NL-205ENST00000609104 THEGQ9P2T0 379 aa14.26□□□□□ -0.13
USP6NL-205ENST00000609104 RFX1P22670 979 aa14.26□□□□□ -0.13
USP6NL-205ENST00000609104 PDZD4Q76G19 769 aaPredicted RBP14.26□□□□□ -0.13
USP6NL-205ENST00000609104 LARGE2Q8N3Y3 721 aa14.26□□□□□ -0.13
USP6NL-205ENST00000609104 COPB1P53618 953 aaKnown RBP14.26□□□□□ -0.13
USP6NL-205ENST00000609104 ASPHQ12797 758 aa14.26□□□□□ -0.13
USP6NL-205ENST00000609104 EXOC3L4Q17RC7 722 aa14.26□□□□□ -0.13
USP6NL-205ENST00000609104 PDCD2Q16342 344 aaPredicted RBP14.26□□□□□ -0.13
USP6NL-205ENST00000609104 PSPC1Q8WXF1 523 aaKnown RBP14.26□□□□□ -0.13
USP6NL-205ENST00000609104 ORC6Q9Y5N6 252 aa14.26□□□□□ -0.13
USP6NL-205ENST00000609104 NUP160Q12769 1436 aa14.26□□□□□ -0.13
USP6NL-205ENST00000609104 TOM1O60784 492 aa14.25□□□□□ -0.13
USP6NL-205ENST00000609104 BANK1Q8NDB2 785 aa14.25□□□□□ -0.13
USP6NL-205ENST00000609104 ARPP21Q9UBL0 812 aaPredicted RBP14.25□□□□□ -0.13
USP6NL-205ENST00000609104 FIS1Q9Y3D6 152 aa14.25□□□□□ -0.13
USP6NL-205ENST00000609104 DNAJC8O75937 253 aaPredicted RBP14.25□□□□□ -0.13
USP6NL-205ENST00000609104 ANKRD20A4Q4UJ75 823 aa14.25□□□□□ -0.13
USP6NL-205ENST00000609104 ANKRD20A8PQ5CZ79 823 aa14.25□□□□□ -0.13
USP6NL-205ENST00000609104 ANKRD20A2Q5SQ80 823 aa14.25□□□□□ -0.13
USP6NL-205ENST00000609104 ANKRD20A1Q5TYW2 823 aa14.25□□□□□ -0.13
USP6NL-205ENST00000609104 SPZ1Q9BXG8 430 aa14.25□□□□□ -0.13
USP6NL-205ENST00000609104 MYL7Q01449 175 aa14.25□□□□□ -0.13
USP6NL-205ENST00000609104 ZKSCAN8Q15776 578 aaPredicted RBP14.25□□□□□ -0.13
USP6NL-205ENST00000609104 FAM47CQ5HY64 1035 aa14.25□□□□□ -0.13
USP6NL-205ENST00000609104 ZBTB8OSQ8IWT0 167 aa14.25□□□□□ -0.13
USP6NL-205ENST00000609104 IFNL3Q8IZI9 196 aa14.25□□□□□ -0.13
USP6NL-205ENST00000609104 KIF22Q14807 665 aa14.25□□□□□ -0.13
USP6NL-205ENST00000609104 BBOF1Q8ND07 529 aa14.25□□□□□ -0.13
USP6NL-205ENST00000609104 CCDC138Q96M89 665 aa14.25□□□□□ -0.13
USP6NL-205ENST00000609104 TRPA1O75762 1119 aa14.25□□□□□ -0.13
USP6NL-205ENST00000609104 PTPN21Q16825 1174 aa14.25□□□□□ -0.13
USP6NL-205ENST00000609104 TM6SF1Q9BZW5 370 aa14.25□□□□□ -0.13
USP6NL-205ENST00000609104 HAUS4Q9H6D7 363 aa14.25□□□□□ -0.13
USP6NL-205ENST00000609104 TBK1Q9UHD2 729 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms