RNA–Protein interactions for RNA: ENST00000608425.5

CTCFL-217, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,915 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-217ENST00000608425 STK11IPQ8N1F8 1099 aa13.19□□□□□ -0.3
CTCFL-217ENST00000608425 NBPF15Q8N660 670 aa13.19□□□□□ -0.3
CTCFL-217ENST00000608425 PSMB7Q99436 277 aa13.19□□□□□ -0.3
CTCFL-217ENST00000608425 SYT15Q9BQS2 421 aa13.19□□□□□ -0.3
CTCFL-217ENST00000608425 NDST4Q9H3R1 872 aa13.19□□□□□ -0.3
CTCFL-217ENST00000608425 AATFQ9NY61 560 aaKnown RBP eCLIP13.19□□□□□ -0.3
CTCFL-217ENST00000608425 ESYT3A0FGR9 886 aa13.19□□□□□ -0.3
CTCFL-217ENST00000608425 GMNCA6NCL1 334 aa13.19□□□□□ -0.3
CTCFL-217ENST00000608425 ZSCAN5CA6NGD5 496 aaPredicted RBP13.19□□□□□ -0.3
CTCFL-217ENST00000608425 DNAJC8O75937 253 aaPredicted RBP13.19□□□□□ -0.3
CTCFL-217ENST00000608425 ACBD5Q5T8D3 534 aaPredicted RBP13.19□□□□□ -0.3
CTCFL-217ENST00000608425 RNF220Q5VTB9 566 aa13.19□□□□□ -0.3
CTCFL-217ENST00000608425 GALNT17Q6IS24 598 aa13.19□□□□□ -0.3
CTCFL-217ENST00000608425 CHST3Q7LGC8 479 aa13.19□□□□□ -0.3
CTCFL-217ENST00000608425 GRAMD1CQ8IYS0 662 aa13.19□□□□□ -0.3
CTCFL-217ENST00000608425 CCDC63Q8NA47 563 aa13.19□□□□□ -0.3
CTCFL-217ENST00000608425 SNRKQ9NRH2 765 aa13.19□□□□□ -0.3
CTCFL-217ENST00000608425 GGA2Q9UJY4 613 aa13.19□□□□□ -0.3
CTCFL-217ENST00000608425 DISP2A7MBM2 1401 aa13.19□□□□□ -0.3
CTCFL-217ENST00000608425 KCNJ2P63252 427 aa13.19□□□□□ -0.3
CTCFL-217ENST00000608425 SHC4Q6S5L8 630 aa13.19□□□□□ -0.3
CTCFL-217ENST00000608425 ELOA2Q8IYF1 753 aaPredicted RBP13.19□□□□□ -0.3
CTCFL-217ENST00000608425 EDC3Q96F86 508 aaKnown RBP13.19□□□□□ -0.3
CTCFL-217ENST00000608425 NEK1Q96PY6 1258 aa13.19□□□□□ -0.3
CTCFL-217ENST00000608425 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.19□□□□□ -0.3
CTCFL-217ENST00000608425 MYH15Q9Y2K3 1946 aa13.19□□□□□ -0.3
CTCFL-217ENST00000608425 RFX7Q2KHR2 1363 aa13.18□□□□□ -0.3
CTCFL-217ENST00000608425 ROBO1Q9Y6N7 1651 aa13.18□□□□□ -0.3
CTCFL-217ENST00000608425 KIF28PB7ZC32 967 aa13.18□□□□□ -0.3
CTCFL-217ENST00000608425 FDPSP14324 419 aaKnown RBP13.18□□□□□ -0.3
CTCFL-217ENST00000608425 PIP4K2AP48426 406 aaPredicted RBP13.18□□□□□ -0.3
CTCFL-217ENST00000608425 GUCY2FP51841 1108 aa13.18□□□□□ -0.3
CTCFL-217ENST00000608425 EVA1CP58658 441 aa13.18□□□□□ -0.3
CTCFL-217ENST00000608425 PTPN12Q05209 780 aaKnown RBP13.18□□□□□ -0.3
CTCFL-217ENST00000608425 ITGB3BPQ13352 177 aaPredicted RBP13.18□□□□□ -0.3
CTCFL-217ENST00000608425 ADAM9Q13443 819 aa13.18□□□□□ -0.3
CTCFL-217ENST00000608425 LACTB2Q53H82 288 aaPredicted RBP13.18□□□□□ -0.3
CTCFL-217ENST00000608425 ANKRD20A2Q5SQ80 823 aa13.18□□□□□ -0.3
CTCFL-217ENST00000608425 ANKRD20A1Q5TYW2 823 aa13.18□□□□□ -0.3
CTCFL-217ENST00000608425 ANKRD20A3Q5VUR7 823 aa13.18□□□□□ -0.3
CTCFL-217ENST00000608425 UBE3BQ7Z3V4 1068 aa13.18□□□□□ -0.3
CTCFL-217ENST00000608425 CNBD1Q8NA66 436 aa13.18□□□□□ -0.3
CTCFL-217ENST00000608425 PREBQ9HCU5 417 aa13.18□□□□□ -0.3
CTCFL-217ENST00000608425 ANKIB1Q9P2G1 1089 aa13.18□□□□□ -0.3
CTCFL-217ENST00000608425 U3KPZ7 1027 aaPredicted RBP13.18□□□□□ -0.3
CTCFL-217ENST00000608425 COL16A1Q07092 1604 aaPredicted RBP13.18□□□□□ -0.3
CTCFL-217ENST00000608425 A0A087WZG4 1122 aa13.18□□□□□ -0.3
CTCFL-217ENST00000608425 A6NNZ2 444 aa13.18□□□□□ -0.3
CTCFL-217ENST00000608425 FUT4P22083 530 aa13.18□□□□□ -0.3
CTCFL-217ENST00000608425 CMA1P23946 247 aa13.18□□□□□ -0.3
CTCFL-217ENST00000608425 TUBB8Q3ZCM7 444 aa13.18□□□□□ -0.3
CTCFL-217ENST00000608425 FAM133BQ5BKY9 247 aaKnown RBP13.18□□□□□ -0.3
CTCFL-217ENST00000608425 APTXQ7Z2E3 356 aaKnown RBP13.18□□□□□ -0.3
CTCFL-217ENST00000608425 RAB11FIP4Q86YS3 637 aa13.18□□□□□ -0.3
CTCFL-217ENST00000608425 CACNA2D3Q8IZS8 1091 aa13.18□□□□□ -0.3
CTCFL-217ENST00000608425 PHC3Q8NDX5 983 aa13.18□□□□□ -0.3
CTCFL-217ENST00000608425 WDR35Q9P2L0 1181 aa13.18□□□□□ -0.3
CTCFL-217ENST00000608425 DUSP10Q9Y6W6 482 aa13.18□□□□□ -0.3
CTCFL-217ENST00000608425 A0A1B0GTH6 734 aa13.17□□□□□ -0.3
CTCFL-217ENST00000608425 CNGA1P29973 690 aa13.17□□□□□ -0.3
CTCFL-217ENST00000608425 MPP3Q13368 585 aa13.17□□□□□ -0.3
CTCFL-217ENST00000608425 ALS2CLQ60I27 953 aa13.17□□□□□ -0.3
CTCFL-217ENST00000608425 ANO7Q6IWH7 933 aa13.17□□□□□ -0.3
CTCFL-217ENST00000608425 CRELD2Q6UXH1 353 aaPredicted RBP13.17□□□□□ -0.3
CTCFL-217ENST00000608425 CCDC129Q6ZRS4 1044 aa13.17□□□□□ -0.3
CTCFL-217ENST00000608425 KCNG4Q8TDN1 519 aa13.17□□□□□ -0.3
CTCFL-217ENST00000608425 CNKSR1Q969H4 720 aa13.17□□□□□ -0.3
CTCFL-217ENST00000608425 STRN4Q9NRL3 753 aa13.17□□□□□ -0.3
CTCFL-217ENST00000608425 GGT7Q9UJ14 662 aa13.17□□□□□ -0.3
CTCFL-217ENST00000608425 CD151P48509 253 aa13.17□□□□□ -0.3
CTCFL-217ENST00000608425 GNAQP50148 359 aa13.17□□□□□ -0.3
CTCFL-217ENST00000608425 TAF11Q15544 211 aa13.17□□□□□ -0.3
CTCFL-217ENST00000608425 ZMYM1Q5SVZ6 1142 aa13.17□□□□□ -0.3
CTCFL-217ENST00000608425 CFAP58Q5T655 872 aa13.17□□□□□ -0.3
CTCFL-217ENST00000608425 KLHL10Q6JEL2 608 aa13.17□□□□□ -0.3
CTCFL-217ENST00000608425 ARMC9Q7Z3E5 817 aa13.17□□□□□ -0.3
CTCFL-217ENST00000608425 IQCKQ8N0W5 287 aa13.17□□□□□ -0.3
CTCFL-217ENST00000608425 PROCA1Q8NCQ7 364 aaPredicted RBP13.17□□□□□ -0.3
CTCFL-217ENST00000608425 ARHGEF1Q92888 912 aaKnown RBP13.17□□□□□ -0.3
CTCFL-217ENST00000608425 ALDH8A1Q9H2A2 487 aaPredicted RBP13.17□□□□□ -0.3
CTCFL-217ENST00000608425 SENP2Q9HC62 589 aa13.17□□□□□ -0.3
CTCFL-217ENST00000608425 JADE2Q9NQC1 790 aa13.17□□□□□ -0.3
CTCFL-217ENST00000608425 SEC31BQ9NQW1 1179 aa13.17□□□□□ -0.3
CTCFL-217ENST00000608425 AGAP1Q9UPQ3 857 aa13.17□□□□□ -0.3
CTCFL-217ENST00000608425 OR2W6PQ8NHA6 318 aa13.16□□□□□ -0.3
CTCFL-217ENST00000608425 CWC25Q9NXE8 425 aaPredicted RBP13.16□□□□□ -0.3
CTCFL-217ENST00000608425 MAN1B1Q9UKM7 699 aa13.16□□□□□ -0.3
CTCFL-217ENST00000608425 RASSF10A6NK89 507 aa13.16□□□□□ -0.3
CTCFL-217ENST00000608425 SMAPO00193 183 aa13.16□□□□□ -0.3
CTCFL-217ENST00000608425 INHBCP55103 352 aa13.16□□□□□ -0.3
CTCFL-217ENST00000608425 TRADDQ15628 312 aa13.16□□□□□ -0.3
CTCFL-217ENST00000608425 NAA15Q9BXJ9 866 aaKnown RBP13.16□□□□□ -0.3
CTCFL-217ENST00000608425 ZMYM6O95789 1325 aa13.16□□□□□ -0.3
CTCFL-217ENST00000608425 JCADQ9P266 1359 aa13.16□□□□□ -0.3
CTCFL-217ENST00000608425 RCCD1A6NED2 376 aa13.16□□□□□ -0.3
CTCFL-217ENST00000608425 ATP5J2-PTCD1G3V325 749 aa13.16□□□□□ -0.3
CTCFL-217ENST00000608425 PSMD14O00487 310 aa13.16□□□□□ -0.3
CTCFL-217ENST00000608425 PTCD1O75127 700 aaKnown RBP13.16□□□□□ -0.3
CTCFL-217ENST00000608425 ZNF189O75820 626 aaPredicted RBP13.16□□□□□ -0.3
CTCFL-217ENST00000608425 CXCR5P32302 372 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms