RNA–Protein interactions for RNA: ENST00000608254.1

PTCHD1-AS-202, Transcript of PTCHD1 antisense RNA (head to head), humanhuman

TSL 4 BASIC

Gene PTCHD1-AS, Length 557 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-AS-202ENST00000608254 PPP1R11O60927 126 aaPredicted RBP13.87□□□□□ -0.19
PTCHD1-AS-202ENST00000608254 LARGE1O95461 756 aa13.87□□□□□ -0.19
PTCHD1-AS-202ENST00000608254 AKAP17AQ02040 695 aaKnown RBP13.87□□□□□ -0.19
PTCHD1-AS-202ENST00000608254 GRB14Q14449 540 aa13.87□□□□□ -0.19
PTCHD1-AS-202ENST00000608254 KCTD2Q14681 263 aa13.87□□□□□ -0.19
PTCHD1-AS-202ENST00000608254 USH1GQ495M9 461 aa13.87□□□□□ -0.19
PTCHD1-AS-202ENST00000608254 MORN1Q5T089 497 aa13.87□□□□□ -0.19
PTCHD1-AS-202ENST00000608254 OTOP1Q7RTM1 612 aa13.87□□□□□ -0.19
PTCHD1-AS-202ENST00000608254 CTU1Q7Z7A3 348 aaKnown RBP13.87□□□□□ -0.19
PTCHD1-AS-202ENST00000608254 TRIM22Q8IYM9 498 aa13.87□□□□□ -0.19
PTCHD1-AS-202ENST00000608254 NECAB1Q8N987 351 aa13.87□□□□□ -0.19
PTCHD1-AS-202ENST00000608254 RGS22Q8NE09 1264 aa13.87□□□□□ -0.19
PTCHD1-AS-202ENST00000608254 SOCS4Q8WXH5 440 aa13.87□□□□□ -0.19
PTCHD1-AS-202ENST00000608254 MMP19Q99542 508 aa13.87□□□□□ -0.19
PTCHD1-AS-202ENST00000608254 NUDT12Q9BQG2 462 aa13.87□□□□□ -0.19
PTCHD1-AS-202ENST00000608254 RNF26Q9BY78 433 aaPredicted RBP13.87□□□□□ -0.19
PTCHD1-AS-202ENST00000608254 HOMER2Q9NSB8 354 aa13.87□□□□□ -0.19
PTCHD1-AS-202ENST00000608254 GJD2Q9UKL4 321 aa13.87□□□□□ -0.19
PTCHD1-AS-202ENST00000608254 TRIM17Q9Y577 477 aa13.87□□□□□ -0.19
PTCHD1-AS-202ENST00000608254 hCG_1642624A0A1W2PR95 340 aa13.86□□□□□ -0.19
PTCHD1-AS-202ENST00000608254 hCG_1984214I3L0E3 225 aa13.86□□□□□ -0.19
PTCHD1-AS-202ENST00000608254 SSRP1Q08945 709 aaKnown RBP13.86□□□□□ -0.19
PTCHD1-AS-202ENST00000608254 MUM1L1Q5H9M0 696 aa13.86□□□□□ -0.19
PTCHD1-AS-202ENST00000608254 ANKRD35Q8N283 1001 aa13.86□□□□□ -0.19
PTCHD1-AS-202ENST00000608254 ZNF713Q8N859 430 aaPredicted RBP13.86□□□□□ -0.19
PTCHD1-AS-202ENST00000608254 CLEC4DQ8WXI8 215 aa13.86□□□□□ -0.19
PTCHD1-AS-202ENST00000608254 USP6NLQ92738 828 aa13.86□□□□□ -0.19
PTCHD1-AS-202ENST00000608254 PHKBQ93100 1093 aa13.86□□□□□ -0.19
PTCHD1-AS-202ENST00000608254 SLC26A6Q9BXS9 759 aa13.86□□□□□ -0.19
PTCHD1-AS-202ENST00000608254 CD2BP2O95400 341 aaKnown RBP13.85□□□□□ -0.19
PTCHD1-AS-202ENST00000608254 TAL1P17542 331 aaPredicted RBP13.85□□□□□ -0.19
PTCHD1-AS-202ENST00000608254 ADORA2AP29274 412 aa13.85□□□□□ -0.19
PTCHD1-AS-202ENST00000608254 RGS2P41220 211 aa13.85□□□□□ -0.19
PTCHD1-AS-202ENST00000608254 FLT3LGP49771 235 aa13.85□□□□□ -0.19
PTCHD1-AS-202ENST00000608254 PRKCZQ05513 592 aa13.85□□□□□ -0.19
PTCHD1-AS-202ENST00000608254 MAP2K5Q13163 448 aa13.85□□□□□ -0.19
PTCHD1-AS-202ENST00000608254 IRF5Q13568 498 aa13.85□□□□□ -0.19
PTCHD1-AS-202ENST00000608254 PKN2Q16513 984 aaKnown RBP13.85□□□□□ -0.19
PTCHD1-AS-202ENST00000608254 PFKFB3Q16875 520 aaPredicted RBP13.85□□□□□ -0.19
PTCHD1-AS-202ENST00000608254 MCF2L2Q86YR7 1114 aa13.85□□□□□ -0.19
PTCHD1-AS-202ENST00000608254 DDX11Q96FC9 970 aa13.85□□□□□ -0.19
PTCHD1-AS-202ENST00000608254 LLPHQ9BRT6 129 aaKnown RBP13.85□□□□□ -0.19
PTCHD1-AS-202ENST00000608254 SLC5A4Q9NY91 659 aa13.85□□□□□ -0.19
PTCHD1-AS-202ENST00000608254 PFASO15067 1338 aa13.85□□□□□ -0.19
PTCHD1-AS-202ENST00000608254 PARP14Q460N5 1801 aa13.85□□□□□ -0.19
PTCHD1-AS-202ENST00000608254 NFIBO00712 420 aa13.84□□□□□ -0.19
PTCHD1-AS-202ENST00000608254 DEXIO95424 95 aa13.84□□□□□ -0.19
PTCHD1-AS-202ENST00000608254 CTDNEP1O95476 244 aa13.84□□□□□ -0.19
PTCHD1-AS-202ENST00000608254 HOXC6P09630 235 aa13.84□□□□□ -0.19
PTCHD1-AS-202ENST00000608254 XRCC5P13010 732 aaKnown RBP13.84□□□□□ -0.19
PTCHD1-AS-202ENST00000608254 SCG2P13521 617 aa13.84□□□□□ -0.19
PTCHD1-AS-202ENST00000608254 PKN1Q16512 942 aa13.84□□□□□ -0.19
PTCHD1-AS-202ENST00000608254 PPP1R18Q6NYC8 613 aa13.84□□□□□ -0.19
PTCHD1-AS-202ENST00000608254 NSMFQ6X4W1 530 aa13.84□□□□□ -0.19
PTCHD1-AS-202ENST00000608254 HEATR3Q7Z4Q2 680 aa13.84□□□□□ -0.19
PTCHD1-AS-202ENST00000608254 DPP9Q86TI2 863 aa13.84□□□□□ -0.19
PTCHD1-AS-202ENST00000608254 CCDC83Q8IWF9 413 aa13.84□□□□□ -0.19
PTCHD1-AS-202ENST00000608254 SAMD3Q8N6K7 520 aa13.84□□□□□ -0.19
PTCHD1-AS-202ENST00000608254 SNX21Q969T3 373 aa13.84□□□□□ -0.19
PTCHD1-AS-202ENST00000608254 TMX3Q96JJ7 454 aa13.84□□□□□ -0.19
PTCHD1-AS-202ENST00000608254 A1CFQ9NQ94 594 aaKnown RBP13.84□□□□□ -0.19
PTCHD1-AS-202ENST00000608254 BARHL2Q9NY43 387 aa13.84□□□□□ -0.19
PTCHD1-AS-202ENST00000608254 MAP3K20Q9NYL2 800 aaKnown RBP13.84□□□□□ -0.19
PTCHD1-AS-202ENST00000608254 CYP39A1Q9NYL5 469 aa13.84□□□□□ -0.19
PTCHD1-AS-202ENST00000608254 GABRQQ9UN88 632 aa13.84□□□□□ -0.19
PTCHD1-AS-202ENST00000608254 PTPN22Q9Y2R2 807 aa13.84□□□□□ -0.19
PTCHD1-AS-202ENST00000608254 STK36Q9NRP7 1315 aa13.84□□□□□ -0.19
PTCHD1-AS-202ENST00000608254 DNAJC25-GNG10A0A024R161 153 aa13.83□□□□□ -0.2
PTCHD1-AS-202ENST00000608254 COBLO75128 1261 aa13.83□□□□□ -0.2
PTCHD1-AS-202ENST00000608254 GHRHRQ02643 423 aa13.83□□□□□ -0.2
PTCHD1-AS-202ENST00000608254 ST3GAL1Q11201 340 aa13.83□□□□□ -0.2
PTCHD1-AS-202ENST00000608254 WWC2Q6AWC2 1192 aa13.83□□□□□ -0.2
PTCHD1-AS-202ENST00000608254 RNF207Q6ZRF8 634 aa13.83□□□□□ -0.2
PTCHD1-AS-202ENST00000608254 TEX2Q8IWB9 1127 aa13.83□□□□□ -0.2
PTCHD1-AS-202ENST00000608254 TRMT44Q8IYL2 757 aaKnown RBP13.83□□□□□ -0.2
PTCHD1-AS-202ENST00000608254 NSUN7Q8NE18 718 aaKnown RBP13.83□□□□□ -0.2
PTCHD1-AS-202ENST00000608254 RAET1EQ8TD07 263 aa13.83□□□□□ -0.2
PTCHD1-AS-202ENST00000608254 DIS3Q9Y2L1 958 aaKnown RBP13.83□□□□□ -0.2
PTCHD1-AS-202ENST00000608254 PTPDC1A2A3K4 754 aa13.82□□□□□ -0.2
PTCHD1-AS-202ENST00000608254 POTEB2H3BUK9 544 aa13.82□□□□□ -0.2
PTCHD1-AS-202ENST00000608254 STXBP3O00186 592 aa13.82□□□□□ -0.2
PTCHD1-AS-202ENST00000608254 OPLAHO14841 1288 aa13.82□□□□□ -0.2
PTCHD1-AS-202ENST00000608254 PPFIA3O75145 1194 aa13.82□□□□□ -0.2
PTCHD1-AS-202ENST00000608254 PGK2P07205 417 aa13.82□□□□□ -0.2
PTCHD1-AS-202ENST00000608254 CYP2B6P20813 491 aa13.82□□□□□ -0.2
PTCHD1-AS-202ENST00000608254 NAPAP54920 295 aa13.82□□□□□ -0.2
PTCHD1-AS-202ENST00000608254 BAATQ14032 418 aaPredicted RBP13.82□□□□□ -0.2
PTCHD1-AS-202ENST00000608254 ZNF792Q3KQV3 632 aa13.82□□□□□ -0.2
PTCHD1-AS-202ENST00000608254 FAM177A1Q8N128 213 aaPredicted RBP13.82□□□□□ -0.2
PTCHD1-AS-202ENST00000608254 CCDC12Q8WUD4 166 aaPredicted RBP13.82□□□□□ -0.2
PTCHD1-AS-202ENST00000608254 WASF1Q92558 559 aa13.82□□□□□ -0.2
PTCHD1-AS-202ENST00000608254 GPKOWQ92917 476 aaPredicted RBP eCLIP13.82□□□□□ -0.2
PTCHD1-AS-202ENST00000608254 APBA2Q99767 749 aa13.82□□□□□ -0.2
PTCHD1-AS-202ENST00000608254 GLT8D2Q9H1C3 349 aa13.82□□□□□ -0.2
PTCHD1-AS-202ENST00000608254 SH3GLB2Q9NR46 395 aa13.82□□□□□ -0.2
PTCHD1-AS-202ENST00000608254 GCOM1H8Y6P7 765 aaPredicted RBP13.81□□□□□ -0.2
PTCHD1-AS-202ENST00000608254 CFBP00751 764 aa13.81□□□□□ -0.2
PTCHD1-AS-202ENST00000608254 POLR2MP0CAP2 368 aa13.81□□□□□ -0.2
PTCHD1-AS-202ENST00000608254 HSD17B4P51659 736 aa13.81□□□□□ -0.2
PTCHD1-AS-202ENST00000608254 RPS6P62753 249 aaKnown RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms