RNA–Protein interactions for RNA: ENST00000607836.1

AC009961.1-203, humanhuman

TSL 1 (best) BASIC

Gene AC009961.1, Length 2,520 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009961.1-203ENST00000607836 HPS3Q969F9 1004 aa17.27■□□□□ 0.36
AC009961.1-203ENST00000607836 PI4KBQ9UBF8 816 aa17.27■□□□□ 0.36
AC009961.1-203ENST00000607836 POTEMA6NI47 508 aa17.26■□□□□ 0.35
AC009961.1-203ENST00000607836 CEP135Q66GS9 1140 aa17.26■□□□□ 0.35
AC009961.1-203ENST00000607836 SIAH1Q8IUQ4 282 aa17.26■□□□□ 0.35
AC009961.1-203ENST00000607836 SLC1A4P43007 532 aa17.26■□□□□ 0.35
AC009961.1-203ENST00000607836 PMS1P54277 932 aaKnown RBP17.26■□□□□ 0.35
AC009961.1-203ENST00000607836 NAA30Q147X3 362 aaPredicted RBP17.26■□□□□ 0.35
AC009961.1-203ENST00000607836 SAMD1Q6SPF0 538 aaPredicted RBP17.26■□□□□ 0.35
AC009961.1-203ENST00000607836 NELFBQ8WX92 580 aa17.26■□□□□ 0.35
AC009961.1-203ENST00000607836 APTXQ7Z2E3 356 aaKnown RBP17.25■□□□□ 0.35
AC009961.1-203ENST00000607836 CDAN1Q8IWY9 1227 aa17.25■□□□□ 0.35
AC009961.1-203ENST00000607836 PNMA6FA0A0J9YX94 578 aa17.25■□□□□ 0.35
AC009961.1-203ENST00000607836 HMGB2P26583 209 aaKnown RBP17.25■□□□□ 0.35
AC009961.1-203ENST00000607836 IKQ13123 557 aaPredicted RBP17.25■□□□□ 0.35
AC009961.1-203ENST00000607836 KMT5BQ4FZB7 885 aa17.25■□□□□ 0.35
AC009961.1-203ENST00000607836 NUDT12Q9BQG2 462 aa17.25■□□□□ 0.35
AC009961.1-203ENST00000607836 VPS16Q9H269 839 aa17.25■□□□□ 0.35
AC009961.1-203ENST00000607836 QSER1Q2KHR3 1735 aa17.25■□□□□ 0.35
AC009961.1-203ENST00000607836 GH2P01242 217 aa17.24■□□□□ 0.35
AC009961.1-203ENST00000607836 ICA1Q05084 483 aa17.24■□□□□ 0.35
AC009961.1-203ENST00000607836 USH1GQ495M9 461 aa17.24■□□□□ 0.35
AC009961.1-203ENST00000607836 SLFN13Q68D06 897 aa17.24■□□□□ 0.35
AC009961.1-203ENST00000607836 SPECC1LQ69YQ0 1117 aa17.24■□□□□ 0.35
AC009961.1-203ENST00000607836 FAM177A1Q8N128 213 aaPredicted RBP17.24■□□□□ 0.35
AC009961.1-203ENST00000607836 PPP1R13BQ96KQ4 1090 aa17.24■□□□□ 0.35
AC009961.1-203ENST00000607836 CSRNP1Q96S65 589 aa17.24■□□□□ 0.35
AC009961.1-203ENST00000607836 MMTAG2Q9BU76 263 aaKnown RBP17.24■□□□□ 0.35
AC009961.1-203ENST00000607836 TMX1Q9H3N1 280 aa17.24■□□□□ 0.35
AC009961.1-203ENST00000607836 TNS1Q9HBL0 1735 aaKnown RBP17.24■□□□□ 0.35
AC009961.1-203ENST00000607836 NR1I3Q14994 352 aa17.24■□□□□ 0.35
AC009961.1-203ENST00000607836 CALCRLQ16602 461 aa17.24■□□□□ 0.35
AC009961.1-203ENST00000607836 ZBTB5O15062 677 aa17.23■□□□□ 0.35
AC009961.1-203ENST00000607836 SMARCA1P28370 1054 aa17.23■□□□□ 0.35
AC009961.1-203ENST00000607836 PAK1Q13153 545 aa17.23■□□□□ 0.35
AC009961.1-203ENST00000607836 QRICH1Q2TAL8 776 aa17.23■□□□□ 0.35
AC009961.1-203ENST00000607836 ZNF658Q5TYW1 1059 aaPredicted RBP17.23■□□□□ 0.35
AC009961.1-203ENST00000607836 NYAP1Q6ZVC0 841 aa17.23■□□□□ 0.35
AC009961.1-203ENST00000607836 IDI2Q9BXS1 227 aa17.23■□□□□ 0.35
AC009961.1-203ENST00000607836 TAB2Q9NYJ8 693 aa17.23■□□□□ 0.35
AC009961.1-203ENST00000607836 SIPA1L1O43166 1804 aa17.23■□□□□ 0.35
AC009961.1-203ENST00000607836 TC2NQ8N9U0 490 aa17.23■□□□□ 0.35
AC009961.1-203ENST00000607836 DHX36Q9H2U1 1008 aaKnown RBP17.23■□□□□ 0.35
AC009961.1-203ENST00000607836 PSTPIP2Q9H939 334 aa17.23■□□□□ 0.35
AC009961.1-203ENST00000607836 SERPINA10Q9UK55 444 aa17.23■□□□□ 0.35
AC009961.1-203ENST00000607836 SMCHD1A6NHR9 2005 aa17.23■□□□□ 0.35
AC009961.1-203ENST00000607836 DYNC1I1O14576 645 aa17.22■□□□□ 0.35
AC009961.1-203ENST00000607836 KLRC4O43908 158 aa17.22■□□□□ 0.35
AC009961.1-203ENST00000607836 FCER1AP12319 257 aa17.22■□□□□ 0.35
AC009961.1-203ENST00000607836 ABCB5Q2M3G0 1257 aa17.22■□□□□ 0.35
AC009961.1-203ENST00000607836 CCSER1Q9C0I3 900 aa17.22■□□□□ 0.35
AC009961.1-203ENST00000607836 EHD4Q9H223 541 aa17.22■□□□□ 0.35
AC009961.1-203ENST00000607836 PCDHA1Q9Y5I3 950 aa17.22■□□□□ 0.35
AC009961.1-203ENST00000607836 A0A1B0GTH6 734 aa17.22■□□□□ 0.35
AC009961.1-203ENST00000607836 F5H6K3 240 aa17.22■□□□□ 0.35
AC009961.1-203ENST00000607836 PSMD14O00487 310 aa17.22■□□□□ 0.35
AC009961.1-203ENST00000607836 PES1O00541 588 aaKnown RBP17.22■□□□□ 0.35
AC009961.1-203ENST00000607836 DPEP1P16444 411 aa17.22■□□□□ 0.35
AC009961.1-203ENST00000607836 KLRC3Q07444 240 aa17.22■□□□□ 0.35
AC009961.1-203ENST00000607836 MTF1Q14872 753 aa17.22■□□□□ 0.35
AC009961.1-203ENST00000607836 KRT31Q15323 416 aa17.22■□□□□ 0.35
AC009961.1-203ENST00000607836 CDKAL1Q5VV42 579 aa17.22■□□□□ 0.35
AC009961.1-203ENST00000607836 DYMQ7RTS9 669 aa17.22■□□□□ 0.35
AC009961.1-203ENST00000607836 LARGE2Q8N3Y3 721 aa17.22■□□□□ 0.35
AC009961.1-203ENST00000607836 CCDC17Q96LX7 622 aa17.22■□□□□ 0.35
AC009961.1-203ENST00000607836 DESI2Q9BSY9 194 aa17.22■□□□□ 0.35
AC009961.1-203ENST00000607836 KBTBD4Q9NVX7 518 aa17.22■□□□□ 0.35
AC009961.1-203ENST00000607836 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.22■□□□□ 0.35
AC009961.1-203ENST00000607836 V9GYY5 206 aaPredicted RBP17.22■□□□□ 0.35
AC009961.1-203ENST00000607836 A0A1W2PRG0 241 aa17.21■□□□□ 0.35
AC009961.1-203ENST00000607836 PRPHP41219 470 aa17.21■□□□□ 0.35
AC009961.1-203ENST00000607836 ECE1P42892 770 aa17.21■□□□□ 0.35
AC009961.1-203ENST00000607836 ASIC1P78348 528 aa17.21■□□□□ 0.35
AC009961.1-203ENST00000607836 TBX2Q13207 712 aaPredicted RBP17.21■□□□□ 0.35
AC009961.1-203ENST00000607836 CDC37Q16543 378 aaPredicted RBP17.21■□□□□ 0.35
AC009961.1-203ENST00000607836 GPATCH4Q5T3I0 446 aaKnown RBP17.21■□□□□ 0.35
AC009961.1-203ENST00000607836 SYT10Q6XYQ8 523 aa17.21■□□□□ 0.35
AC009961.1-203ENST00000607836 MIGA2Q7L4E1 593 aa17.21■□□□□ 0.35
AC009961.1-203ENST00000607836 TMEM139Q8IV31 216 aa17.21■□□□□ 0.35
AC009961.1-203ENST00000607836 KANSL2Q9H9L4 492 aa17.21■□□□□ 0.35
AC009961.1-203ENST00000607836 VEZTQ9HBM0 779 aa17.21■□□□□ 0.35
AC009961.1-203ENST00000607836 ADD3Q9UEY8 706 aaKnown RBP17.21■□□□□ 0.35
AC009961.1-203ENST00000607836 LRWD1Q9UFC0 647 aa17.21■□□□□ 0.35
AC009961.1-203ENST00000607836 ESYT2A0FGR8 921 aa17.21■□□□□ 0.35
AC009961.1-203ENST00000607836 LAD1O00515 517 aa17.21■□□□□ 0.35
AC009961.1-203ENST00000607836 RBL2Q08999 1139 aa17.21■□□□□ 0.35
AC009961.1-203ENST00000607836 MCM6Q14566 821 aa17.21■□□□□ 0.35
AC009961.1-203ENST00000607836 ZYXQ15942 572 aaKnown RBP17.21■□□□□ 0.35
AC009961.1-203ENST00000607836 CCDC84Q86UT8 332 aaPredicted RBP17.21■□□□□ 0.35
AC009961.1-203ENST00000607836 ZNF710Q8N1W2 664 aa17.21■□□□□ 0.35
AC009961.1-203ENST00000607836 CUL5Q93034 780 aa17.21■□□□□ 0.35
AC009961.1-203ENST00000607836 RIC8AQ9NPQ8 531 aa17.21■□□□□ 0.35
AC009961.1-203ENST00000607836 ERCC3P19447 782 aa17.2■□□□□ 0.34
AC009961.1-203ENST00000607836 STK4Q13043 487 aa17.2■□□□□ 0.34
AC009961.1-203ENST00000607836 TTLL6Q8N841 843 aa17.2■□□□□ 0.34
AC009961.1-203ENST00000607836 IGSF22Q8N9C0 903 aa17.2■□□□□ 0.34
AC009961.1-203ENST00000607836 MTMR9Q96QG7 549 aa17.2■□□□□ 0.34
AC009961.1-203ENST00000607836 BAG1Q99933 345 aaPredicted RBP17.2■□□□□ 0.34
AC009961.1-203ENST00000607836 PYM1Q9BRP8 204 aaKnown RBP17.2■□□□□ 0.34
AC009961.1-203ENST00000607836 PPP1R1BQ9UD71 204 aaPredicted RBP17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms