RNA–Protein interactions for RNA: ENST00000606066.1

CTSA-211, Transcript of cathepsin A, humanhuman

TSL 5

Gene CTSA, Length 603 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-211ENST00000606066 ACAD9Q9H845 621 aa16.56■□□□□ 0.24
CTSA-211ENST00000606066 TRIOBPQ9H2D6 2365 aa16.56■□□□□ 0.24
CTSA-211ENST00000606066 ZBTB5O15062 677 aa16.55■□□□□ 0.24
CTSA-211ENST00000606066 XRCC5P13010 732 aaKnown RBP16.55■□□□□ 0.24
CTSA-211ENST00000606066 TOB2Q14106 344 aaPredicted RBP16.55■□□□□ 0.24
CTSA-211ENST00000606066 DPP9Q86TI2 863 aa16.55■□□□□ 0.24
CTSA-211ENST00000606066 RAB11FIP4Q86YS3 637 aa16.55■□□□□ 0.24
CTSA-211ENST00000606066 TRMT44Q8IYL2 757 aaKnown RBP16.55■□□□□ 0.24
CTSA-211ENST00000606066 ANKRD35Q8N283 1001 aa16.55■□□□□ 0.24
CTSA-211ENST00000606066 SLAIN1Q8ND83 568 aa16.55■□□□□ 0.24
CTSA-211ENST00000606066 PXYLP1Q8TE99 480 aa16.55■□□□□ 0.24
CTSA-211ENST00000606066 AMNQ9BXJ7 453 aa16.55■□□□□ 0.24
CTSA-211ENST00000606066 HOMER2Q9NSB8 354 aa16.55■□□□□ 0.24
CTSA-211ENST00000606066 RNF146Q9NTX7 359 aa16.55■□□□□ 0.24
CTSA-211ENST00000606066 CYP2B6P20813 491 aa16.54■□□□□ 0.24
CTSA-211ENST00000606066 ADORA2AP29274 412 aa16.54■□□□□ 0.24
CTSA-211ENST00000606066 NEK4P51957 841 aa16.54■□□□□ 0.24
CTSA-211ENST00000606066 QRICH1Q2TAL8 776 aa16.54■□□□□ 0.24
CTSA-211ENST00000606066 TMTC3Q6ZXV5 915 aa16.54■□□□□ 0.24
CTSA-211ENST00000606066 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.54■□□□□ 0.24
CTSA-211ENST00000606066 FBXO11Q86XK2 927 aa16.54■□□□□ 0.24
CTSA-211ENST00000606066 HOMER1Q86YM7 354 aa16.54■□□□□ 0.24
CTSA-211ENST00000606066 IL27Q8NEV9 243 aa16.54■□□□□ 0.24
CTSA-211ENST00000606066 USP6NLQ92738 828 aa16.54■□□□□ 0.24
CTSA-211ENST00000606066 DPF3Q92784 378 aa16.54■□□□□ 0.24
CTSA-211ENST00000606066 MTMR8Q96EF0 704 aa16.54■□□□□ 0.24
CTSA-211ENST00000606066 RRP36Q96EU6 259 aaKnown RBP16.54■□□□□ 0.24
CTSA-211ENST00000606066 DDX11Q96FC9 970 aa16.54■□□□□ 0.24
CTSA-211ENST00000606066 ZNF274Q96GC6 653 aaPredicted RBP16.54■□□□□ 0.24
CTSA-211ENST00000606066 SEC63Q9UGP8 760 aaKnown RBP16.54■□□□□ 0.24
CTSA-211ENST00000606066 ABCB11O95342 1321 aa16.53■□□□□ 0.24
CTSA-211ENST00000606066 A0A0C4DFX4 3053 aa16.53■□□□□ 0.24
CTSA-211ENST00000606066 PNMA6FA0A0J9YX94 578 aa16.53■□□□□ 0.24
CTSA-211ENST00000606066 CYTH3O43739 400 aa16.53■□□□□ 0.24
CTSA-211ENST00000606066 ADCY3O60266 1144 aa16.53■□□□□ 0.24
CTSA-211ENST00000606066 PLEKHA8P1O95397 391 aa16.53■□□□□ 0.24
CTSA-211ENST00000606066 HOXC6P09630 235 aa16.53■□□□□ 0.24
CTSA-211ENST00000606066 CCL5P13501 91 aa16.53■□□□□ 0.24
CTSA-211ENST00000606066 PDIA3P30101 505 aaKnown RBP16.53■□□□□ 0.24
CTSA-211ENST00000606066 UBXN2AP68543 259 aa16.53■□□□□ 0.24
CTSA-211ENST00000606066 SRBD1Q8N5C6 995 aaKnown RBP16.53■□□□□ 0.24
CTSA-211ENST00000606066 PIGSQ96S52 555 aa16.53■□□□□ 0.24
CTSA-211ENST00000606066 APBA2Q99767 749 aa16.53■□□□□ 0.24
CTSA-211ENST00000606066 HTATIP2Q9BUP3 242 aa16.53■□□□□ 0.24
CTSA-211ENST00000606066 MAF1Q9H063 256 aa16.53■□□□□ 0.24
CTSA-211ENST00000606066 PRO3102Q9H379 93 aa16.53■□□□□ 0.24
CTSA-211ENST00000606066 PARP14Q460N5 1801 aa16.52■□□□□ 0.24
CTSA-211ENST00000606066 PFASO15067 1338 aa16.52■□□□□ 0.24
CTSA-211ENST00000606066 RBBP6Q7Z6E9 1792 aaKnown RBP16.52■□□□□ 0.24
CTSA-211ENST00000606066 USH1GQ495M9 461 aa16.52■□□□□ 0.24
CTSA-211ENST00000606066 CHRDL2Q6WN34 429 aa16.52■□□□□ 0.24
CTSA-211ENST00000606066 RNF208Q9H0X6 261 aa16.52■□□□□ 0.24
CTSA-211ENST00000606066 DIS3Q9Y2L1 958 aaKnown RBP16.52■□□□□ 0.24
CTSA-211ENST00000606066 MRPL11Q9Y3B7 192 aaKnown RBP16.52■□□□□ 0.24
CTSA-211ENST00000606066 NID2Q14112 1375 aa16.51■□□□□ 0.23
CTSA-211ENST00000606066 AK2P54819 239 aa16.51■□□□□ 0.23
CTSA-211ENST00000606066 MCF2L2Q86YR7 1114 aa16.51■□□□□ 0.23
CTSA-211ENST00000606066 CMTR1Q8N1G2 835 aaKnown RBP16.51■□□□□ 0.23
CTSA-211ENST00000606066 CCDC82Q8N4S0 544 aa16.51■□□□□ 0.23
CTSA-211ENST00000606066 RGS22Q8NE09 1264 aa16.51■□□□□ 0.23
CTSA-211ENST00000606066 RBM27Q9P2N5 1060 aaKnown RBP16.51■□□□□ 0.23
CTSA-211ENST00000606066 BIN2Q9UBW5 565 aaPredicted RBP16.51■□□□□ 0.23
CTSA-211ENST00000606066 PCDHA1Q9Y5I3 950 aa16.51■□□□□ 0.23
CTSA-211ENST00000606066 NR2E3Q9Y5X4 410 aa16.51■□□□□ 0.23
CTSA-211ENST00000606066 COBLO75128 1261 aa16.5■□□□□ 0.23
CTSA-211ENST00000606066 SGPL1O95470 568 aa16.5■□□□□ 0.23
CTSA-211ENST00000606066 CDC27P30260 824 aa16.5■□□□□ 0.23
CTSA-211ENST00000606066 ADD1P35611 737 aaKnown RBP16.5■□□□□ 0.23
CTSA-211ENST00000606066 RABEP1Q15276 862 aa16.5■□□□□ 0.23
CTSA-211ENST00000606066 SLC35G1Q2M3R5 365 aa16.5■□□□□ 0.23
CTSA-211ENST00000606066 MUM1L1Q5H9M0 696 aa16.5■□□□□ 0.23
CTSA-211ENST00000606066 CPLX2Q6PUV4 134 aaKnown RBP16.5■□□□□ 0.23
CTSA-211ENST00000606066 NSMFQ6X4W1 530 aa16.5■□□□□ 0.23
CTSA-211ENST00000606066 U2AF1L4Q8WU68 220 aaKnown RBP16.5■□□□□ 0.23
CTSA-211ENST00000606066 PIBF1Q8WXW3 757 aa16.5■□□□□ 0.23
CTSA-211ENST00000606066 TBC1D32Q96NH3 1257 aa16.5■□□□□ 0.23
CTSA-211ENST00000606066 A1CFQ9NQ94 594 aaKnown RBP16.5■□□□□ 0.23
CTSA-211ENST00000606066 FAM217BQ9NTX9 383 aaPredicted RBP16.5■□□□□ 0.23
CTSA-211ENST00000606066 POTEB2H3BUK9 544 aa16.49■□□□□ 0.23
CTSA-211ENST00000606066 CPLX1O14810 134 aa16.49■□□□□ 0.23
CTSA-211ENST00000606066 HMGCRP04035 888 aa16.49■□□□□ 0.23
CTSA-211ENST00000606066 PGK2P07205 417 aa16.49■□□□□ 0.23
CTSA-211ENST00000606066 ELNP15502 786 aa16.49■□□□□ 0.23
CTSA-211ENST00000606066 CCT2P78371 535 aaKnown RBP16.49■□□□□ 0.23
CTSA-211ENST00000606066 ZNF792Q3KQV3 632 aa16.49■□□□□ 0.23
CTSA-211ENST00000606066 OLFML2BQ68BL8 750 aa16.49■□□□□ 0.23
CTSA-211ENST00000606066 RNF207Q6ZRF8 634 aa16.49■□□□□ 0.23
CTSA-211ENST00000606066 NPLOC4Q8TAT6 608 aa16.49■□□□□ 0.23
CTSA-211ENST00000606066 CLEC4DQ8WXI8 215 aa16.49■□□□□ 0.23
CTSA-211ENST00000606066 KIF2CQ99661 725 aa16.49■□□□□ 0.23
CTSA-211ENST00000606066 LARP6Q9BRS8 491 aaKnown RBP16.49■□□□□ 0.23
CTSA-211ENST00000606066 SLKQ9H2G2 1235 aaPredicted RBP16.49■□□□□ 0.23
CTSA-211ENST00000606066 CYP39A1Q9NYL5 469 aa16.49■□□□□ 0.23
CTSA-211ENST00000606066 LAMA3Q16787 3333 aa16.48■□□□□ 0.23
CTSA-211ENST00000606066 DNAJC25-GNG10A0A024R161 153 aa16.48■□□□□ 0.23
CTSA-211ENST00000606066 PTPDC1A2A3K4 754 aa16.48■□□□□ 0.23
CTSA-211ENST00000606066 NFIBO00712 420 aa16.48■□□□□ 0.23
CTSA-211ENST00000606066 PPP1R11O60927 126 aaPredicted RBP16.48■□□□□ 0.23
CTSA-211ENST00000606066 TAL1P17542 331 aaPredicted RBP16.48■□□□□ 0.23
CTSA-211ENST00000606066 AKAP17AQ02040 695 aaKnown RBP16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms