RNA–Protein interactions for RNA: ENST00000605847.5

NEDD8-MDP1-204, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 758 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-204ENST00000605847 ACAD9Q9H845 621 aa18.42■□□□□ 0.54
NEDD8-MDP1-204ENST00000605847 PAG1Q9NWQ8 432 aa18.42■□□□□ 0.54
NEDD8-MDP1-204ENST00000605847 ARPP21Q9UBL0 812 aaPredicted RBP18.42■□□□□ 0.54
NEDD8-MDP1-204ENST00000605847 CLIP2Q9UDT6 1046 aa18.42■□□□□ 0.54
NEDD8-MDP1-204ENST00000605847 ISY1Q9ULR0 285 aaKnown RBP18.42■□□□□ 0.54
NEDD8-MDP1-204ENST00000605847 NCOR1O75376 2440 aa18.41■□□□□ 0.54
NEDD8-MDP1-204ENST00000605847 EPOPA6NHQ4 379 aa18.41■□□□□ 0.54
NEDD8-MDP1-204ENST00000605847 PI4K2BG5E9Z4 385 aa18.41■□□□□ 0.54
NEDD8-MDP1-204ENST00000605847 SMPD1P17405 629 aa18.41■□□□□ 0.54
NEDD8-MDP1-204ENST00000605847 TAP1Q03518 808 aa18.41■□□□□ 0.54
NEDD8-MDP1-204ENST00000605847 SLFNL1Q499Z3 407 aa18.41■□□□□ 0.54
NEDD8-MDP1-204ENST00000605847 STK11IPQ8N1F8 1099 aa18.41■□□□□ 0.54
NEDD8-MDP1-204ENST00000605847 RHPN1Q8TCX5 695 aa18.41■□□□□ 0.54
NEDD8-MDP1-204ENST00000605847 KHSRPQ92945 711 aaKnown RBP eCLIP18.41■□□□□ 0.544e-7■■□□□ 13.3
NEDD8-MDP1-204ENST00000605847 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.41■□□□□ 0.54
NEDD8-MDP1-204ENST00000605847 FDX1P10109 184 aa18.4■□□□□ 0.54
NEDD8-MDP1-204ENST00000605847 CYP2C9P11712 490 aa18.4■□□□□ 0.54
NEDD8-MDP1-204ENST00000605847 IQSEC1Q6DN90 963 aa18.4■□□□□ 0.54
NEDD8-MDP1-204ENST00000605847 CEP85Q6P2H3 762 aa18.4■□□□□ 0.54
NEDD8-MDP1-204ENST00000605847 FAM133AQ8N9E0 248 aa18.4■□□□□ 0.54
NEDD8-MDP1-204ENST00000605847 FTOQ9C0B1 505 aaKnown RBP eCLIP18.4■□□□□ 0.547e-7■■□□□ 13.4
NEDD8-MDP1-204ENST00000605847 TRMT13Q9NUP7 481 aaKnown RBP18.4■□□□□ 0.54
NEDD8-MDP1-204ENST00000605847 Q9Y3F1 56 aa18.4■□□□□ 0.54
NEDD8-MDP1-204ENST00000605847 BAZ2AQ9UIF9 1905 aaKnown RBP18.39■□□□□ 0.53
NEDD8-MDP1-204ENST00000605847 PRR33A8MZF0 331 aa18.39■□□□□ 0.53
NEDD8-MDP1-204ENST00000605847 RASA1P20936 1047 aa18.39■□□□□ 0.53
NEDD8-MDP1-204ENST00000605847 RFC2P35250 354 aa18.39■□□□□ 0.53
NEDD8-MDP1-204ENST00000605847 GRB10Q13322 594 aa18.39■□□□□ 0.53
NEDD8-MDP1-204ENST00000605847 EEPD1Q7L9B9 569 aa18.39■□□□□ 0.53
NEDD8-MDP1-204ENST00000605847 VWCEQ96DN2 955 aa18.39■□□□□ 0.53
NEDD8-MDP1-204ENST00000605847 POLR3EQ9NVU0 708 aa18.39■□□□□ 0.53
NEDD8-MDP1-204ENST00000605847 TNKSO95271 1327 aa18.39■□□□□ 0.53
NEDD8-MDP1-204ENST00000605847 SOWAHBA6NEL2 793 aa18.38■□□□□ 0.53
NEDD8-MDP1-204ENST00000605847 IKQ13123 557 aaPredicted RBP18.38■□□□□ 0.53
NEDD8-MDP1-204ENST00000605847 KIAA1211Q6ZU35 1233 aa18.38■□□□□ 0.53
NEDD8-MDP1-204ENST00000605847 HERC6Q8IVU3 1022 aa18.38■□□□□ 0.53
NEDD8-MDP1-204ENST00000605847 RETREG2Q8NC44 543 aa18.38■□□□□ 0.53
NEDD8-MDP1-204ENST00000605847 KIF1BPQ96EK5 621 aa18.38■□□□□ 0.53
NEDD8-MDP1-204ENST00000605847 UIMC1Q96RL1 719 aa18.38■□□□□ 0.53
NEDD8-MDP1-204ENST00000605847 BOLA2Q9H3K6 86 aa18.38■□□□□ 0.53
NEDD8-MDP1-204ENST00000605847 A1CFQ9NQ94 594 aaKnown RBP18.38■□□□□ 0.53
NEDD8-MDP1-204ENST00000605847 GPHNQ9NQX3 736 aaPredicted RBP18.38■□□□□ 0.53
NEDD8-MDP1-204ENST00000605847 PDGFCQ9NRA1 345 aa18.38■□□□□ 0.53
NEDD8-MDP1-204ENST00000605847 RNF146Q9NTX7 359 aa18.38■□□□□ 0.53
NEDD8-MDP1-204ENST00000605847 ZBED9Q6R2W3 1325 aa18.38■□□□□ 0.53
NEDD8-MDP1-204ENST00000605847 PTGS1P23219 599 aa18.37■□□□□ 0.53
NEDD8-MDP1-204ENST00000605847 UBE3CQ15386 1083 aa18.37■□□□□ 0.53
NEDD8-MDP1-204ENST00000605847 CSPP1Q1MSJ5 1256 aa18.37■□□□□ 0.53
NEDD8-MDP1-204ENST00000605847 FAM47CQ5HY64 1035 aa18.37■□□□□ 0.53
NEDD8-MDP1-204ENST00000605847 ZSCAN25Q6NSZ9 544 aa18.37■□□□□ 0.53
NEDD8-MDP1-204ENST00000605847 FBXO16Q8IX29 292 aaPredicted RBP18.37■□□□□ 0.53
NEDD8-MDP1-204ENST00000605847 MCM3APO60318 1980 aa18.37■□□□□ 0.53
NEDD8-MDP1-204ENST00000605847 MINDY4BA8MYZ0 360 aa18.36■□□□□ 0.53
NEDD8-MDP1-204ENST00000605847 TMEM232C9JQI7 657 aa18.36■□□□□ 0.53
NEDD8-MDP1-204ENST00000605847 MYL3P08590 195 aa18.36■□□□□ 0.53
NEDD8-MDP1-204ENST00000605847 BMP3P12645 472 aa18.36■□□□□ 0.53
NEDD8-MDP1-204ENST00000605847 SSTR3P32745 418 aaPredicted RBP18.36■□□□□ 0.53
NEDD8-MDP1-204ENST00000605847 KCNJ6P48051 423 aa18.36■□□□□ 0.53
NEDD8-MDP1-204ENST00000605847 MRE11P49959 708 aa18.36■□□□□ 0.53
NEDD8-MDP1-204ENST00000605847 STAT2P52630 851 aa18.36■□□□□ 0.53
NEDD8-MDP1-204ENST00000605847 TKFCQ3LXA3 575 aa18.36■□□□□ 0.53
NEDD8-MDP1-204ENST00000605847 TAPT1Q6NXT6 567 aa18.36■□□□□ 0.53
NEDD8-MDP1-204ENST00000605847 ZNF444Q8N0Y2 327 aaPredicted RBP18.36■□□□□ 0.53
NEDD8-MDP1-204ENST00000605847 TRERF1Q96PN7 1200 aa18.36■□□□□ 0.53
NEDD8-MDP1-204ENST00000605847 ZNF287Q9HBT7 754 aa18.36■□□□□ 0.53
NEDD8-MDP1-204ENST00000605847 TRANK1O15050 2925 aa18.35■□□□□ 0.53
NEDD8-MDP1-204ENST00000605847 ARHGEF15O94989 841 aa18.35■□□□□ 0.53
NEDD8-MDP1-204ENST00000605847 ALAS1P13196 640 aa18.35■□□□□ 0.53
NEDD8-MDP1-204ENST00000605847 CPT1AP50416 773 aa18.35■□□□□ 0.53
NEDD8-MDP1-204ENST00000605847 RPAP2Q8IXW5 612 aaPredicted RBP18.35■□□□□ 0.53
NEDD8-MDP1-204ENST00000605847 GJD3Q8N144 294 aa18.35■□□□□ 0.53
NEDD8-MDP1-204ENST00000605847 LRRC47Q8N1G4 583 aaKnown RBP18.35■□□□□ 0.53
NEDD8-MDP1-204ENST00000605847 MKL1Q969V6 931 aa18.35■□□□□ 0.53
NEDD8-MDP1-204ENST00000605847 ZBED2Q9BTP6 218 aa18.35■□□□□ 0.53
NEDD8-MDP1-204ENST00000605847 PUS7LQ9H0K6 701 aaKnown RBP18.35■□□□□ 0.53
NEDD8-MDP1-204ENST00000605847 VTA1Q9NP79 307 aa18.35■□□□□ 0.53
NEDD8-MDP1-204ENST00000605847 CD320Q9NPF0 282 aa18.35■□□□□ 0.53
NEDD8-MDP1-204ENST00000605847 LMCD1Q9NZU5 365 aa18.35■□□□□ 0.53
NEDD8-MDP1-204ENST00000605847 SYNPO2Q9UMS6 1093 aa18.35■□□□□ 0.53
NEDD8-MDP1-204ENST00000605847 PRRC2BQ5JSZ5 2229 aaKnown RBP18.35■□□□□ 0.53
NEDD8-MDP1-204ENST00000605847 PITPNM1O00562 1244 aa18.34■□□□□ 0.53
NEDD8-MDP1-204ENST00000605847 BAIAP3O94812 1187 aa18.34■□□□□ 0.53
NEDD8-MDP1-204ENST00000605847 TTLL1O95922 423 aa18.34■□□□□ 0.53
NEDD8-MDP1-204ENST00000605847 IQCF3P0C7M6 154 aa18.34■□□□□ 0.53
NEDD8-MDP1-204ENST00000605847 ALADP13716 330 aa18.34■□□□□ 0.53
NEDD8-MDP1-204ENST00000605847 BFSP2Q13515 415 aa18.34■□□□□ 0.53
NEDD8-MDP1-204ENST00000605847 DUSP28Q4G0W2 176 aa18.34■□□□□ 0.53
NEDD8-MDP1-204ENST00000605847 SBK1Q52WX2 424 aa18.34■□□□□ 0.53
NEDD8-MDP1-204ENST00000605847 BRDTQ58F21 947 aaPredicted RBP18.34■□□□□ 0.53
NEDD8-MDP1-204ENST00000605847 SLFN13Q68D06 897 aa18.34■□□□□ 0.53
NEDD8-MDP1-204ENST00000605847 GMCL1P1Q8NEA9 526 aa18.34■□□□□ 0.53
NEDD8-MDP1-204ENST00000605847 CHURC1Q8WUH1 139 aa18.34■□□□□ 0.53
NEDD8-MDP1-204ENST00000605847 CEP95Q96GE4 821 aa18.34■□□□□ 0.53
NEDD8-MDP1-204ENST00000605847 NOD1Q9Y239 953 aa18.34■□□□□ 0.53
NEDD8-MDP1-204ENST00000605847 DDX49Q9Y6V7 483 aaKnown RBP18.34■□□□□ 0.53
NEDD8-MDP1-204ENST00000605847 LPXNO60711 386 aa18.33■□□□□ 0.52
NEDD8-MDP1-204ENST00000605847 CHGBP05060 677 aa18.33■□□□□ 0.52
NEDD8-MDP1-204ENST00000605847 PURAQ00577 322 aaKnown RBP18.33■□□□□ 0.52
NEDD8-MDP1-204ENST00000605847 TMEM63BQ5T3F8 832 aa18.33■□□□□ 0.52
NEDD8-MDP1-204ENST00000605847 FAM160B2Q86V87 743 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms