RNA–Protein interactions for RNA: ENST00000605457.5

TUBE1-211, Transcript of tubulin epsilon 1, humanhuman

TSL 5

Gene TUBE1, Length 1,645 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-211ENST00000605457 TNRC18O15417 2968 aaPredicted RBP16.53■□□□□ 0.24
TUBE1-211ENST00000605457 PRKAR2AP13861 404 aaKnown RBP16.53■□□□□ 0.24
TUBE1-211ENST00000605457 Q6ZUG5 572 aa16.53■□□□□ 0.24
TUBE1-211ENST00000605457 MICU3Q86XE3 530 aa16.53■□□□□ 0.24
TUBE1-211ENST00000605457 RAB11FIP4Q86YS3 637 aa16.53■□□□□ 0.24
TUBE1-211ENST00000605457 DDX11Q96FC9 970 aa16.53■□□□□ 0.24
TUBE1-211ENST00000605457 AGXT2Q9BYV1 514 aa16.53■□□□□ 0.24
TUBE1-211ENST00000605457 UNC93B1Q9H1C4 597 aa16.53■□□□□ 0.24
TUBE1-211ENST00000605457 VAT1LQ9HCJ6 419 aa16.53■□□□□ 0.24
TUBE1-211ENST00000605457 BRPF3Q9ULD4 1205 aa16.53■□□□□ 0.24
TUBE1-211ENST00000605457 DIS3Q9Y2L1 958 aaKnown RBP16.53■□□□□ 0.24
TUBE1-211ENST00000605457 POTEFA5A3E0 1075 aa16.52■□□□□ 0.24
TUBE1-211ENST00000605457 NFIBO00712 420 aa16.52■□□□□ 0.24
TUBE1-211ENST00000605457 ANAPC15P60006 121 aa16.52■□□□□ 0.24
TUBE1-211ENST00000605457 CACNB2Q08289 660 aaPredicted RBP16.52■□□□□ 0.24
TUBE1-211ENST00000605457 USH1GQ495M9 461 aa16.52■□□□□ 0.24
TUBE1-211ENST00000605457 RUFY3Q7L099 469 aa16.52■□□□□ 0.24
TUBE1-211ENST00000605457 CCDC144CPQ8IYA2 1237 aa16.52■□□□□ 0.24
TUBE1-211ENST00000605457 CLEC4DQ8WXI8 215 aa16.52■□□□□ 0.24
TUBE1-211ENST00000605457 TMEM106CQ9BVX2 250 aa16.52■□□□□ 0.24
TUBE1-211ENST00000605457 SPZ1Q9BXG8 430 aa16.52■□□□□ 0.24
TUBE1-211ENST00000605457 RNF208Q9H0X6 261 aa16.52■□□□□ 0.24
TUBE1-211ENST00000605457 RPTORQ8N122 1335 aa16.52■□□□□ 0.24
TUBE1-211ENST00000605457 ZBTB5O15062 677 aa16.52■□□□□ 0.23
TUBE1-211ENST00000605457 PLEKHA8P1O95397 391 aa16.52■□□□□ 0.23
TUBE1-211ENST00000605457 CYP2C19P33261 490 aa16.52■□□□□ 0.23
TUBE1-211ENST00000605457 FGD1P98174 961 aa16.52■□□□□ 0.23
TUBE1-211ENST00000605457 MFSD14CQ5VZR4 134 aa16.52■□□□□ 0.23
TUBE1-211ENST00000605457 FANCBQ8NB91 859 aa16.52■□□□□ 0.23
TUBE1-211ENST00000605457 BRF1Q92994 677 aa16.52■□□□□ 0.23
TUBE1-211ENST00000605457 FGD4Q96M96 766 aa16.52■□□□□ 0.23
TUBE1-211ENST00000605457 PAK6Q9NQU5 681 aaPredicted RBP16.52■□□□□ 0.23
TUBE1-211ENST00000605457 CYP39A1Q9NYL5 469 aa16.52■□□□□ 0.23
TUBE1-211ENST00000605457 KLF18A0A0U1RQI7 1052 aa16.51■□□□□ 0.23
TUBE1-211ENST00000605457 PPP1R11O60927 126 aaPredicted RBP16.51■□□□□ 0.23
TUBE1-211ENST00000605457 SMARCA1P28370 1054 aa16.51■□□□□ 0.23
TUBE1-211ENST00000605457 GNAQP50148 359 aa16.51■□□□□ 0.23
TUBE1-211ENST00000605457 RCAN1P53805 252 aa16.51■□□□□ 0.23
TUBE1-211ENST00000605457 SYNE3Q6ZMZ3 975 aa16.51■□□□□ 0.23
TUBE1-211ENST00000605457 FBXO11Q86XK2 927 aa16.51■□□□□ 0.23
TUBE1-211ENST00000605457 FAM133AQ8N9E0 248 aa16.51■□□□□ 0.23
TUBE1-211ENST00000605457 IL17RAQ96F46 866 aa16.51■□□□□ 0.23
TUBE1-211ENST00000605457 PIGSQ96S52 555 aa16.51■□□□□ 0.23
TUBE1-211ENST00000605457 LZTS2Q9BRK4 669 aa16.51■□□□□ 0.23
TUBE1-211ENST00000605457 UPF3BQ9BZI7 483 aaKnown RBP16.51■□□□□ 0.23
TUBE1-211ENST00000605457 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.51■□□□□ 0.23
TUBE1-211ENST00000605457 HMX1Q9NP08 348 aaPredicted RBP16.51■□□□□ 0.23
TUBE1-211ENST00000605457 CYP46A1Q9Y6A2 500 aa16.51■□□□□ 0.23
TUBE1-211ENST00000605457 DNAH12Q6ZR08 3092 aa16.51■□□□□ 0.23
TUBE1-211ENST00000605457 ABCB11O95342 1321 aa16.5■□□□□ 0.23
TUBE1-211ENST00000605457 ZBTB43O43298 467 aa16.5■□□□□ 0.23
TUBE1-211ENST00000605457 GJB1P08034 283 aa16.5■□□□□ 0.23
TUBE1-211ENST00000605457 CNTN2Q02246 1040 aa16.5■□□□□ 0.23
TUBE1-211ENST00000605457 APOBRQ0VD83 1088 aa16.5■□□□□ 0.23
TUBE1-211ENST00000605457 NSMFQ6X4W1 530 aa16.5■□□□□ 0.23
TUBE1-211ENST00000605457 ZNF467Q7Z7K2 595 aaPredicted RBP16.5■□□□□ 0.23
TUBE1-211ENST00000605457 HOMER1Q86YM7 354 aa16.5■□□□□ 0.23
TUBE1-211ENST00000605457 SRBD1Q8N5C6 995 aaKnown RBP16.5■□□□□ 0.23
TUBE1-211ENST00000605457 TINF2Q9BSI4 451 aa16.5■□□□□ 0.23
TUBE1-211ENST00000605457 AMNQ9BXJ7 453 aa16.5■□□□□ 0.23
TUBE1-211ENST00000605457 PDE4DIPQ5VU43 2346 aa16.5■□□□□ 0.23
TUBE1-211ENST00000605457 NID2Q14112 1375 aa16.49■□□□□ 0.23
TUBE1-211ENST00000605457 POTEB2H3BUK9 544 aa16.49■□□□□ 0.23
TUBE1-211ENST00000605457 CYBAP13498 195 aa16.49■□□□□ 0.23
TUBE1-211ENST00000605457 MAMDC4Q6UXC1 1216 aa16.49■□□□□ 0.23
TUBE1-211ENST00000605457 TMTC3Q6ZXV5 915 aa16.49■□□□□ 0.23
TUBE1-211ENST00000605457 CMTR1Q8N1G2 835 aaKnown RBP16.49■□□□□ 0.23
TUBE1-211ENST00000605457 PNMA6FA0A0J9YX94 578 aa16.48■□□□□ 0.23
TUBE1-211ENST00000605457 GOLGA8BA8MQT2 603 aa16.48■□□□□ 0.23
TUBE1-211ENST00000605457 CCND3P30281 292 aaPredicted RBP16.48■□□□□ 0.23
TUBE1-211ENST00000605457 GJA8P48165 433 aa16.48■□□□□ 0.23
TUBE1-211ENST00000605457 BAATQ14032 418 aaPredicted RBP16.48■□□□□ 0.23
TUBE1-211ENST00000605457 TOB2Q14106 344 aaPredicted RBP16.48■□□□□ 0.23
TUBE1-211ENST00000605457 RTN1Q16799 776 aa16.48■□□□□ 0.23
TUBE1-211ENST00000605457 SLC30A10Q6XR72 485 aa16.48■□□□□ 0.23
TUBE1-211ENST00000605457 MSL3Q8N5Y2 521 aaKnown RBP16.48■□□□□ 0.23
TUBE1-211ENST00000605457 TRPV1Q8NER1 839 aa16.48■□□□□ 0.23
TUBE1-211ENST00000605457 SHISA4Q96DD7 197 aa16.48■□□□□ 0.23
TUBE1-211ENST00000605457 RBM28Q9NW13 759 aaKnown RBP16.48■□□□□ 0.23
TUBE1-211ENST00000605457 ASTN1O14525 1302 aa16.48■□□□□ 0.23
TUBE1-211ENST00000605457 SYNGAP1Q96PV0 1343 aa16.48■□□□□ 0.23
TUBE1-211ENST00000605457 PTPDC1A2A3K4 754 aa16.48■□□□□ 0.23
TUBE1-211ENST00000605457 GOLGA8AA7E2F4 631 aa16.48■□□□□ 0.23
TUBE1-211ENST00000605457 EVCP57679 992 aa16.48■□□□□ 0.23
TUBE1-211ENST00000605457 RPS6P62753 249 aaKnown RBP16.48■□□□□ 0.23
TUBE1-211ENST00000605457 RNF207Q6ZRF8 634 aa16.48■□□□□ 0.23
TUBE1-211ENST00000605457 RGS22Q8NE09 1264 aa16.48■□□□□ 0.23
TUBE1-211ENST00000605457 U2AF1L4Q8WU68 220 aaKnown RBP16.48■□□□□ 0.23
TUBE1-211ENST00000605457 RRP36Q96EU6 259 aaKnown RBP16.48■□□□□ 0.23
TUBE1-211ENST00000605457 DEFB118Q96PH6 123 aa16.48■□□□□ 0.23
TUBE1-211ENST00000605457 MAF1Q9H063 256 aa16.48■□□□□ 0.23
TUBE1-211ENST00000605457 FAM217BQ9NTX9 383 aaPredicted RBP16.48■□□□□ 0.23
TUBE1-211ENST00000605457 MRPL11Q9Y3B7 192 aaKnown RBP16.48■□□□□ 0.23
TUBE1-211ENST00000605457 PCDHA1Q9Y5I3 950 aa16.48■□□□□ 0.23
TUBE1-211ENST00000605457 CNTNAP5Q8WYK1 1306 aa16.47■□□□□ 0.23
TUBE1-211ENST00000605457 KIAA1217Q5T5P2 1943 aa16.47■□□□□ 0.23
TUBE1-211ENST00000605457 SOWAHBA6NEL2 793 aa16.47■□□□□ 0.23
TUBE1-211ENST00000605457 OPLAHO14841 1288 aa16.47■□□□□ 0.23
TUBE1-211ENST00000605457 EN2P19622 333 aaPredicted RBP16.47■□□□□ 0.23
TUBE1-211ENST00000605457 CDC27P30260 824 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms