RNA–Protein interactions for RNA: ENST00000603946.5

NOLC1-208, Transcript of nucleolar and coiled-body phosphoprotein 1, humanhuman

TSL 1 (best)

Gene NOLC1, Length 3,217 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOLC1-208ENST00000603946 CRHR2Q13324 411 aa9.35□□□□□ -0.91
NOLC1-208ENST00000603946 PFKFB3Q16875 520 aaPredicted RBP9.35□□□□□ -0.91
NOLC1-208ENST00000603946 ANO1Q5XXA6 986 aa9.35□□□□□ -0.91
NOLC1-208ENST00000603946 DCAF4Q8WV16 495 aa9.35□□□□□ -0.91
NOLC1-208ENST00000603946 GMCL1Q96IK5 515 aa9.35□□□□□ -0.91
NOLC1-208ENST00000603946 TRERF1Q96PN7 1200 aa9.35□□□□□ -0.91
NOLC1-208ENST00000603946 ALDH8A1Q9H2A2 487 aaPredicted RBP9.35□□□□□ -0.91
NOLC1-208ENST00000603946 RIOX1Q9H6W3 641 aa9.35□□□□□ -0.91
NOLC1-208ENST00000603946 WDR19Q8NEZ3 1342 aa9.35□□□□□ -0.91
NOLC1-208ENST00000603946 C19orf81C9J6K1 198 aa9.35□□□□□ -0.91
NOLC1-208ENST00000603946 STXBP3O00186 592 aa9.35□□□□□ -0.91
NOLC1-208ENST00000603946 WDR46O15213 610 aaKnown RBP9.35□□□□□ -0.91
NOLC1-208ENST00000603946 CDKL5O76039 1030 aa9.35□□□□□ -0.91
NOLC1-208ENST00000603946 MYCLP12524 364 aaPredicted RBP9.35□□□□□ -0.91
NOLC1-208ENST00000603946 ERCC3P19447 782 aa9.35□□□□□ -0.91
NOLC1-208ENST00000603946 CHMP4BP1P59074 171 aa9.35□□□□□ -0.91
NOLC1-208ENST00000603946 BAATQ14032 418 aaPredicted RBP9.35□□□□□ -0.91
NOLC1-208ENST00000603946 MAP3K11Q16584 847 aa9.35□□□□□ -0.91
NOLC1-208ENST00000603946 LETM2Q2VYF4 491 aa9.35□□□□□ -0.91
NOLC1-208ENST00000603946 CCDC178Q5BJE1 867 aa9.35□□□□□ -0.91
NOLC1-208ENST00000603946 DOCK3Q8IZD9 2030 aa9.34□□□□□ -0.91
NOLC1-208ENST00000603946 PNMA6FA0A0J9YX94 578 aa9.34□□□□□ -0.91
NOLC1-208ENST00000603946 OPLAHO14841 1288 aa9.34□□□□□ -0.91
NOLC1-208ENST00000603946 MCM7P33993 719 aa9.34□□□□□ -0.91
NOLC1-208ENST00000603946 GTF2A2P52657 109 aa9.34□□□□□ -0.91
NOLC1-208ENST00000603946 NOL9Q5SY16 702 aaKnown RBP9.34□□□□□ -0.91
NOLC1-208ENST00000603946 TMEM63BQ5T3F8 832 aa9.34□□□□□ -0.91
NOLC1-208ENST00000603946 ANKRD35Q8N283 1001 aa9.34□□□□□ -0.91
NOLC1-208ENST00000603946 BCAS3Q9H6U6 928 aa9.34□□□□□ -0.91
NOLC1-208ENST00000603946 COL20A1Q9P218 1284 aa9.34□□□□□ -0.91
NOLC1-208ENST00000603946 AGTPBP1Q9UPW5 1226 aa9.34□□□□□ -0.91
NOLC1-208ENST00000603946 ZBED4O75132 1171 aa9.34□□□□□ -0.91
NOLC1-208ENST00000603946 CETPP11597 493 aa9.34□□□□□ -0.91
NOLC1-208ENST00000603946 DSG3P32926 999 aa9.34□□□□□ -0.91
NOLC1-208ENST00000603946 PLIN2Q99541 437 aa9.34□□□□□ -0.91
NOLC1-208ENST00000603946 AMNQ9BXJ7 453 aa9.34□□□□□ -0.91
NOLC1-208ENST00000603946 RNF26Q9BY78 433 aaPredicted RBP9.34□□□□□ -0.91
NOLC1-208ENST00000603946 RNF146Q9NTX7 359 aa9.34□□□□□ -0.91
NOLC1-208ENST00000603946 FEM1BQ9UK73 627 aa9.34□□□□□ -0.91
NOLC1-208ENST00000603946 CLIC4Q9Y696 253 aa9.34□□□□□ -0.91
NOLC1-208ENST00000603946 PLIN4Q96Q06 1357 aa9.34□□□□□ -0.91
NOLC1-208ENST00000603946 GNAQP50148 359 aa9.33□□□□□ -0.92
NOLC1-208ENST00000603946 FBXL16Q8N461 479 aa9.33□□□□□ -0.92
NOLC1-208ENST00000603946 LPAR1Q92633 364 aa9.33□□□□□ -0.92
NOLC1-208ENST00000603946 MOV10L1Q9BXT6 1211 aaKnown RBP9.33□□□□□ -0.92
NOLC1-208ENST00000603946 ZNF214Q9UL59 606 aaPredicted RBP9.33□□□□□ -0.92
NOLC1-208ENST00000603946 WDR33Q9C0J8 1336 aaKnown RBP9.33□□□□□ -0.92
NOLC1-208ENST00000603946 DDX39AO00148 427 aaKnown RBP9.33□□□□□ -0.92
NOLC1-208ENST00000603946 CXCL11O14625 94 aa9.33□□□□□ -0.92
NOLC1-208ENST00000603946 ZSCAN22P10073 491 aaPredicted RBP9.33□□□□□ -0.92
NOLC1-208ENST00000603946 C1QTNF8P60827 252 aa9.33□□□□□ -0.92
NOLC1-208ENST00000603946 RPS6P62753 249 aaKnown RBP9.33□□□□□ -0.92
NOLC1-208ENST00000603946 NPY5RQ15761 445 aa9.33□□□□□ -0.92
NOLC1-208ENST00000603946 IFNL1Q8IU54 200 aa9.33□□□□□ -0.92
NOLC1-208ENST00000603946 PIAS4Q8N2W9 510 aaPredicted RBP9.33□□□□□ -0.92
NOLC1-208ENST00000603946 TAAR1Q96RJ0 339 aa9.33□□□□□ -0.92
NOLC1-208ENST00000603946 SLC38A10Q9HBR0 1119 aa9.33□□□□□ -0.92
NOLC1-208ENST00000603946 BARHL2Q9NY43 387 aa9.33□□□□□ -0.92
NOLC1-208ENST00000603946 HOXC10Q9NYD6 342 aa9.33□□□□□ -0.92
NOLC1-208ENST00000603946 PCDHB6Q9Y5E3 794 aa9.33□□□□□ -0.92
NOLC1-208ENST00000603946 PRPF40AO75400 957 aaKnown RBP9.33□□□□□ -0.92
NOLC1-208ENST00000603946 HMGN5P82970 282 aaKnown RBP9.33□□□□□ -0.92
NOLC1-208ENST00000603946 PRAMEF19Q5SWL8 479 aa9.33□□□□□ -0.92
NOLC1-208ENST00000603946 KCTD17Q8N5Z5 321 aa9.33□□□□□ -0.92
NOLC1-208ENST00000603946 IL31RAQ8NI17 732 aa9.33□□□□□ -0.92
NOLC1-208ENST00000603946 INTS4Q96HW7 963 aaKnown RBP9.33□□□□□ -0.92
NOLC1-208ENST00000603946 GZF1Q9H116 711 aaPredicted RBP9.33□□□□□ -0.92
NOLC1-208ENST00000603946 KCNH4Q9UQ05 1017 aa9.33□□□□□ -0.92
NOLC1-208ENST00000603946 SLC10A3P09131 477 aa9.32□□□□□ -0.92
NOLC1-208ENST00000603946 CYP2B6P20813 491 aa9.32□□□□□ -0.92
NOLC1-208ENST00000603946 GRIN1Q05586 938 aa9.32□□□□□ -0.92
NOLC1-208ENST00000603946 GJC2Q5T442 439 aaPredicted RBP9.32□□□□□ -0.92
NOLC1-208ENST00000603946 FASTKD5Q7L8L6 764 aaKnown RBP9.32□□□□□ -0.92
NOLC1-208ENST00000603946 CLIC6Q96NY7 704 aa9.32□□□□□ -0.92
NOLC1-208ENST00000603946 USP28Q96RU2 1077 aa9.32□□□□□ -0.92
NOLC1-208ENST00000603946 SPZ1Q9BXG8 430 aa9.32□□□□□ -0.92
NOLC1-208ENST00000603946 CHMP5Q9NZZ3 219 aa9.32□□□□□ -0.92
NOLC1-208ENST00000603946 TELO2Q9Y4R8 837 aa9.32□□□□□ -0.92
NOLC1-208ENST00000603946 F13A1P00488 732 aa9.32□□□□□ -0.92
NOLC1-208ENST00000603946 MMP1P03956 469 aa9.32□□□□□ -0.92
NOLC1-208ENST00000603946 IRX5P78411 483 aaPredicted RBP9.32□□□□□ -0.92
NOLC1-208ENST00000603946 BLIDQ8IZY5 108 aa9.32□□□□□ -0.92
NOLC1-208ENST00000603946 TBCKQ8TEA7 893 aa9.32□□□□□ -0.92
NOLC1-208ENST00000603946 ERCC4Q92889 916 aaPredicted RBP9.32□□□□□ -0.92
NOLC1-208ENST00000603946 SPATC1LQ9H0A9 340 aa9.32□□□□□ -0.92
NOLC1-208ENST00000603946 POLD4Q9HCU8 107 aa9.32□□□□□ -0.92
NOLC1-208ENST00000603946 PCDHA6Q9UN73 950 aa9.32□□□□□ -0.92
NOLC1-208ENST00000603946 PCDHA8Q9Y5H6 950 aa9.32□□□□□ -0.92
NOLC1-208ENST00000603946 KIAA0100Q14667 2235 aaKnown RBP9.32□□□□□ -0.92
NOLC1-208ENST00000603946 MEIS2O14770 477 aa9.31□□□□□ -0.92
NOLC1-208ENST00000603946 GADD45BO75293 160 aaPredicted RBP9.31□□□□□ -0.92
NOLC1-208ENST00000603946 TDP2O95551 362 aa9.31□□□□□ -0.92
NOLC1-208ENST00000603946 CTGFP29279 349 aa9.31□□□□□ -0.92
NOLC1-208ENST00000603946 SAFBQ15424 915 aaKnown RBP eCLIP9.31□□□□□ -0.92
NOLC1-208ENST00000603946 SH2D3AQ9BRG2 576 aa9.31□□□□□ -0.92
NOLC1-208ENST00000603946 CREBZFQ9NS37 354 aa9.31□□□□□ -0.92
NOLC1-208ENST00000603946 CCDC194A0A1B0GVG4 234 aa9.31□□□□□ -0.92
NOLC1-208ENST00000603946 CCNT1O60563 726 aaKnown RBP9.31□□□□□ -0.92
NOLC1-208ENST00000603946 OSBPP22059 807 aa9.31□□□□□ -0.92
NOLC1-208ENST00000603946 ADCY7P51828 1080 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms