RNA–Protein interactions for RNA: ENST00000603885.5

CCDC12-208, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-208ENST00000603885 TRDNQ13061 729 aa21.21■□□□□ 0.99
CCDC12-208ENST00000603885 TRIM60Q495X7 471 aa21.21■□□□□ 0.99
CCDC12-208ENST00000603885 C1orf53Q5VUE5 145 aa21.21■□□□□ 0.99
CCDC12-208ENST00000603885 UBE2OQ9C0C9 1292 aaKnown RBP21.21■□□□□ 0.99
CCDC12-208ENST00000603885 KATNBL1Q9H079 304 aa21.21■□□□□ 0.99
CCDC12-208ENST00000603885 SPC25Q9HBM1 224 aa21.21■□□□□ 0.99
CCDC12-208ENST00000603885 U3KPZ7 1027 aaPredicted RBP21.21■□□□□ 0.99
CCDC12-208ENST00000603885 WDR19Q8NEZ3 1342 aa21.21■□□□□ 0.99
CCDC12-208ENST00000603885 A0A1W2PQ45 241 aaPredicted RBP21.2■□□□□ 0.98
CCDC12-208ENST00000603885 A0A1W2PQY0 241 aa21.2■□□□□ 0.98
CCDC12-208ENST00000603885 NFIBO00712 420 aa21.2■□□□□ 0.98
CCDC12-208ENST00000603885 SGSM2O43147 1006 aa21.2■□□□□ 0.98
CCDC12-208ENST00000603885 PTH1RQ03431 593 aa21.2■□□□□ 0.98
CCDC12-208ENST00000603885 ASPRV1Q53RT3 343 aa21.2■□□□□ 0.98
CCDC12-208ENST00000603885 KLHDC9Q8NEP7 349 aa21.2■□□□□ 0.98
CCDC12-208ENST00000603885 LBHD1Q9BQE6 289 aaPredicted RBP21.2■□□□□ 0.98
CCDC12-208ENST00000603885 ADD3Q9UEY8 706 aaKnown RBP21.2■□□□□ 0.98
CCDC12-208ENST00000603885 ASTN1O14525 1302 aa21.2■□□□□ 0.98
CCDC12-208ENST00000603885 PTPDC1A2A3K4 754 aa21.19■□□□□ 0.98
CCDC12-208ENST00000603885 MOXD2PA6NHM9 499 aa21.19■□□□□ 0.98
CCDC12-208ENST00000603885 ADCY6O43306 1168 aa21.19■□□□□ 0.98
CCDC12-208ENST00000603885 C6orf222P0C671 652 aaPredicted RBP21.19■□□□□ 0.98
CCDC12-208ENST00000603885 ACLYP53396 1101 aa21.19■□□□□ 0.98
CCDC12-208ENST00000603885 MDM2Q00987 491 aaPredicted RBP21.19■□□□□ 0.98
CCDC12-208ENST00000603885 BAATQ14032 418 aaPredicted RBP21.19■□□□□ 0.98
CCDC12-208ENST00000603885 IFIT1BQ5T764 474 aaKnown RBP21.19■□□□□ 0.98
CCDC12-208ENST00000603885 NUP133Q8WUM0 1156 aa21.19■□□□□ 0.98
CCDC12-208ENST00000603885 UBA5Q9GZZ9 404 aa21.19■□□□□ 0.98
CCDC12-208ENST00000603885 PCDH10Q9P2E7 1040 aa21.19■□□□□ 0.98
CCDC12-208ENST00000603885 LAMA3Q16787 3333 aa21.19■□□□□ 0.98
CCDC12-208ENST00000603885 CYP21A2P08686 494 aa21.18■□□□□ 0.98
CCDC12-208ENST00000603885 PARP1P09874 1014 aaKnown RBP21.18■□□□□ 0.98
CCDC12-208ENST00000603885 CST5P28325 142 aaPredicted RBP21.18■□□□□ 0.98
CCDC12-208ENST00000603885 GJA9P57773 515 aa21.18■□□□□ 0.98
CCDC12-208ENST00000603885 TDHQ8IZJ6 230 aa21.18■□□□□ 0.98
CCDC12-208ENST00000603885 PCSK9Q8NBP7 692 aaKnown RBP21.18■□□□□ 0.98
CCDC12-208ENST00000603885 CLEC4DQ8WXI8 215 aa21.18■□□□□ 0.98
CCDC12-208ENST00000603885 UPF3AQ9H1J1 476 aaKnown RBP21.18■□□□□ 0.98
CCDC12-208ENST00000603885 CPVLQ9H3G5 476 aa21.18■□□□□ 0.98
CCDC12-208ENST00000603885 PRDM5Q9NQX1 630 aaPredicted RBP21.18■□□□□ 0.98
CCDC12-208ENST00000603885 LCTP09848 1927 aa21.17■□□□□ 0.98
CCDC12-208ENST00000603885 SZT2Q5T011 3432 aa21.17■□□□□ 0.98
CCDC12-208ENST00000603885 MYADML2A6NDP7 307 aa21.17■□□□□ 0.98
CCDC12-208ENST00000603885 TNFAIP2Q03169 654 aa21.17■□□□□ 0.98
CCDC12-208ENST00000603885 KCNA10Q16322 511 aa21.17■□□□□ 0.98
CCDC12-208ENST00000603885 CCSAPQ6IQ19 270 aaPredicted RBP21.17■□□□□ 0.98
CCDC12-208ENST00000603885 RNF207Q6ZRF8 634 aa21.17■□□□□ 0.98
CCDC12-208ENST00000603885 NOL8Q76FK4 1167 aaKnown RBP21.17■□□□□ 0.98
CCDC12-208ENST00000603885 PURBQ96QR8 312 aaKnown RBP21.17■□□□□ 0.98
CCDC12-208ENST00000603885 STARD7Q9NQZ5 370 aa21.17■□□□□ 0.98
CCDC12-208ENST00000603885 LRRC37A2A6NM11 1700 aa21.17■□□□□ 0.98
CCDC12-208ENST00000603885 LOC102724159A0A0B4J2E5 919 aa21.16■□□□□ 0.98
CCDC12-208ENST00000603885 CALML3P27482 149 aa21.16■□□□□ 0.98
CCDC12-208ENST00000603885 ALDH5A1P51649 535 aaPredicted RBP21.16■□□□□ 0.98
CCDC12-208ENST00000603885 TLE2Q04725 743 aa21.16■□□□□ 0.98
CCDC12-208ENST00000603885 PWP2Q15269 919 aaKnown RBP21.16■□□□□ 0.98
CCDC12-208ENST00000603885 SEC23AQ15436 765 aa21.16■□□□□ 0.98
CCDC12-208ENST00000603885 CDC37Q16543 378 aaPredicted RBP21.16■□□□□ 0.98
CCDC12-208ENST00000603885 USH1GQ495M9 461 aa21.16■□□□□ 0.98
CCDC12-208ENST00000603885 SLC30A10Q6XR72 485 aa21.16■□□□□ 0.98
CCDC12-208ENST00000603885 CYB5R4Q7L1T6 521 aa21.16■□□□□ 0.98
CCDC12-208ENST00000603885 EEPD1Q7L9B9 569 aa21.16■□□□□ 0.98
CCDC12-208ENST00000603885 RALYLQ86SE5 291 aaKnown RBP21.16■□□□□ 0.98
CCDC12-208ENST00000603885 FBXO16Q8IX29 292 aaPredicted RBP21.16■□□□□ 0.98
CCDC12-208ENST00000603885 ADGRF4Q8IZF3 695 aa21.16■□□□□ 0.98
CCDC12-208ENST00000603885 MORC4Q8TE76 937 aa21.16■□□□□ 0.98
CCDC12-208ENST00000603885 GLT1D1Q96MS3 346 aa21.16■□□□□ 0.98
CCDC12-208ENST00000603885 VTA1Q9NP79 307 aa21.16■□□□□ 0.98
CCDC12-208ENST00000603885 PDLIM7Q9NR12 457 aa21.16■□□□□ 0.98
CCDC12-208ENST00000603885 DDX49Q9Y6V7 483 aaKnown RBP21.16■□□□□ 0.98
CCDC12-208ENST00000603885 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.15■□□□□ 0.98
CCDC12-208ENST00000603885 DHX16O60231 1041 aaKnown RBP21.15■□□□□ 0.98
CCDC12-208ENST00000603885 GNASQ5JWF2 1037 aa21.15■□□□□ 0.98
CCDC12-208ENST00000603885 CENPQQ7L2Z9 268 aaPredicted RBP21.15■□□□□ 0.98
CCDC12-208ENST00000603885 LTBP2Q14767 1821 aa21.14■□□□□ 0.97
CCDC12-208ENST00000603885 ERICH2A1L162 156 aa21.14■□□□□ 0.97
CCDC12-208ENST00000603885 E7EWF7 191 aa21.14■□□□□ 0.97
CCDC12-208ENST00000603885 SOX1O00570 391 aaPredicted RBP21.14■□□□□ 0.97
CCDC12-208ENST00000603885 PQBP1O60828 265 aaKnown RBP21.14■□□□□ 0.97
CCDC12-208ENST00000603885 ASGR1P07306 291 aa21.14■□□□□ 0.97
CCDC12-208ENST00000603885 RPS6P62753 249 aaKnown RBP21.14■□□□□ 0.97
CCDC12-208ENST00000603885 NKX3-2P78367 333 aa21.14■□□□□ 0.97
CCDC12-208ENST00000603885 IRX5P78411 483 aaPredicted RBP21.14■□□□□ 0.97
CCDC12-208ENST00000603885 IQSEC1Q6DN90 963 aa21.14■□□□□ 0.97
CCDC12-208ENST00000603885 KIAA1211Q6ZU35 1233 aa21.14■□□□□ 0.97
CCDC12-208ENST00000603885 TLK2Q86UE8 772 aa21.14■□□□□ 0.97
CCDC12-208ENST00000603885 NCOA7Q8NI08 942 aa21.14■□□□□ 0.97
CCDC12-208ENST00000603885 MAP4K1Q92918 833 aa21.14■□□□□ 0.97
CCDC12-208ENST00000603885 MPHOSPH6Q99547 160 aaKnown RBP21.14■□□□□ 0.97
CCDC12-208ENST00000603885 GNEQ9Y223 722 aaKnown RBP21.14■□□□□ 0.97
CCDC12-208ENST00000603885 ELP1O95163 1332 aa21.13■□□□□ 0.97
CCDC12-208ENST00000603885 ABCB11O95342 1321 aa21.13■□□□□ 0.97
CCDC12-208ENST00000603885 IFIT3O14879 490 aaKnown RBP21.13■□□□□ 0.97
CCDC12-208ENST00000603885 CLTBP09497 229 aa21.13■□□□□ 0.97
CCDC12-208ENST00000603885 SART3Q15020 963 aaKnown RBP21.13■□□□□ 0.97
CCDC12-208ENST00000603885 LRIT3Q3SXY7 679 aa21.13■□□□□ 0.97
CCDC12-208ENST00000603885 TAPT1Q6NXT6 567 aa21.13■□□□□ 0.97
CCDC12-208ENST00000603885 RGS22Q8NE09 1264 aa21.13■□□□□ 0.97
CCDC12-208ENST00000603885 MAF1Q9H063 256 aa21.13■□□□□ 0.97
CCDC12-208ENST00000603885 AP5M1Q9H0R1 490 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms