RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 DPP9Q86TI2 863 aa16.09■□□□□ 0.17
RNF40-212ENST00000602784 RAB11FIP4Q86YS3 637 aa16.09■□□□□ 0.17
RNF40-212ENST00000602784 SLAIN1Q8ND83 568 aa16.09■□□□□ 0.17
RNF40-212ENST00000602784 RGS22Q8NE09 1264 aa16.09■□□□□ 0.17
RNF40-212ENST00000602784 PIGSQ96S52 555 aa16.09■□□□□ 0.17
RNF40-212ENST00000602784 APBA2Q99767 749 aa16.09■□□□□ 0.17
RNF40-212ENST00000602784 HOMER2Q9NSB8 354 aa16.09■□□□□ 0.17
RNF40-212ENST00000602784 NAP1L2Q9ULW6 460 aaPredicted RBP16.09■□□□□ 0.17
RNF40-212ENST00000602784 DIS3Q9Y2L1 958 aaKnown RBP16.09■□□□□ 0.17
RNF40-212ENST00000602784 PFASO15067 1338 aa16.09■□□□□ 0.17
RNF40-212ENST00000602784 ABCB11O95342 1321 aa16.09■□□□□ 0.17
RNF40-212ENST00000602784 BAZ2BQ9UIF8 2168 aaKnown RBP16.09■□□□□ 0.17
RNF40-212ENST00000602784 COBLO75128 1261 aa16.08■□□□□ 0.16
RNF40-212ENST00000602784 CDC27P30260 824 aa16.08■□□□□ 0.16
RNF40-212ENST00000602784 GRK4P32298 578 aa16.08■□□□□ 0.16
RNF40-212ENST00000602784 AK2P54819 239 aa16.08■□□□□ 0.16
RNF40-212ENST00000602784 RABEP1Q15276 862 aa16.08■□□□□ 0.16
RNF40-212ENST00000602784 MUM1L1Q5H9M0 696 aa16.08■□□□□ 0.16
RNF40-212ENST00000602784 ANKRD35Q8N283 1001 aa16.08■□□□□ 0.16
RNF40-212ENST00000602784 CLEC4DQ8WXI8 215 aa16.08■□□□□ 0.16
RNF40-212ENST00000602784 DDX11Q96FC9 970 aa16.08■□□□□ 0.16
RNF40-212ENST00000602784 SEC63Q9UGP8 760 aaKnown RBP16.08■□□□□ 0.16
RNF40-212ENST00000602784 MRPL11Q9Y3B7 192 aaKnown RBP16.08■□□□□ 0.16
RNF40-212ENST00000602784 PPP1R11O60927 126 aaPredicted RBP16.07■□□□□ 0.16
RNF40-212ENST00000602784 CYP2B6P20813 491 aa16.07■□□□□ 0.16
RNF40-212ENST00000602784 ADD1P35611 737 aaKnown RBP16.07■□□□□ 0.16
RNF40-212ENST00000602784 SLC9C1Q4G0N8 1177 aa16.07■□□□□ 0.16
RNF40-212ENST00000602784 HOMER1Q86YM7 354 aa16.07■□□□□ 0.16
RNF40-212ENST00000602784 TNS4Q8IZW8 715 aa16.07■□□□□ 0.16
RNF40-212ENST00000602784 CMTR1Q8N1G2 835 aaKnown RBP16.07■□□□□ 0.16
RNF40-212ENST00000602784 SAMD3Q8N6K7 520 aa16.07■□□□□ 0.16
RNF40-212ENST00000602784 ARMC5Q96C12 935 aa16.07■□□□□ 0.16
RNF40-212ENST00000602784 A1CFQ9NQ94 594 aaKnown RBP16.07■□□□□ 0.16
RNF40-212ENST00000602784 TPCN1Q9ULQ1 816 aa16.07■□□□□ 0.16
RNF40-212ENST00000602784 PCDHA1Q9Y5I3 950 aa16.07■□□□□ 0.16
RNF40-212ENST00000602784 ZNFX1Q9P2E3 1918 aaKnown RBP16.07■□□□□ 0.16
RNF40-212ENST00000602784 SMCHD1A6NHR9 2005 aa16.07■□□□□ 0.16
RNF40-212ENST00000602784 MYH6P13533 1939 aa16.06■□□□□ 0.16
RNF40-212ENST00000602784 PFKFB2O60825 505 aa16.06■□□□□ 0.16
RNF40-212ENST00000602784 IGHA2P01877 340 aa16.06■□□□□ 0.16
RNF40-212ENST00000602784 IFNAR1P17181 557 aa16.06■□□□□ 0.16
RNF40-212ENST00000602784 NTRK3Q16288 839 aa16.06■□□□□ 0.16
RNF40-212ENST00000602784 ZNF792Q3KQV3 632 aa16.06■□□□□ 0.16
RNF40-212ENST00000602784 USH1GQ495M9 461 aa16.06■□□□□ 0.16
RNF40-212ENST00000602784 OLFML2BQ68BL8 750 aa16.06■□□□□ 0.16
RNF40-212ENST00000602784 MCF2L2Q86YR7 1114 aa16.06■□□□□ 0.16
RNF40-212ENST00000602784 CYP39A1Q9NYL5 469 aa16.06■□□□□ 0.16
RNF40-212ENST00000602784 RBM27Q9P2N5 1060 aaKnown RBP16.06■□□□□ 0.16
RNF40-212ENST00000602784 HTTP42858 3142 aa16.06■□□□□ 0.16
RNF40-212ENST00000602784 CNTNAP5Q8WYK1 1306 aa16.05■□□□□ 0.16
RNF40-212ENST00000602784 NFIBO00712 420 aa16.05■□□□□ 0.16
RNF40-212ENST00000602784 HMGCRP04035 888 aa16.05■□□□□ 0.16
RNF40-212ENST00000602784 PGK2P07205 417 aa16.05■□□□□ 0.16
RNF40-212ENST00000602784 GHRHRQ02643 423 aa16.05■□□□□ 0.16
RNF40-212ENST00000602784 ZNF467Q7Z7K2 595 aaPredicted RBP16.05■□□□□ 0.16
RNF40-212ENST00000602784 CCDC82Q8N4S0 544 aa16.05■□□□□ 0.16
RNF40-212ENST00000602784 MSL3Q8N5Y2 521 aaKnown RBP16.05■□□□□ 0.16
RNF40-212ENST00000602784 FAM133AQ8N9E0 248 aa16.05■□□□□ 0.16
RNF40-212ENST00000602784 NPLOC4Q8TAT6 608 aa16.05■□□□□ 0.16
RNF40-212ENST00000602784 LARP6Q9BRS8 491 aaKnown RBP16.05■□□□□ 0.16
RNF40-212ENST00000602784 SLKQ9H2G2 1235 aaPredicted RBP16.05■□□□□ 0.16
RNF40-212ENST00000602784 MAP3K20Q9NYL2 800 aaKnown RBP16.05■□□□□ 0.16
RNF40-212ENST00000602784 V9GY48 417 aaPredicted RBP16.05■□□□□ 0.16
RNF40-212ENST00000602784 POTEB2H3BUK9 544 aa16.04■□□□□ 0.16
RNF40-212ENST00000602784 PRPF3O43395 683 aaKnown RBP16.04■□□□□ 0.16
RNF40-212ENST00000602784 ELNP15502 786 aa16.04■□□□□ 0.16
RNF40-212ENST00000602784 TAL1P17542 331 aaPredicted RBP16.04■□□□□ 0.16
RNF40-212ENST00000602784 CCT2P78371 535 aaKnown RBP16.04■□□□□ 0.16
RNF40-212ENST00000602784 CPLX2Q6PUV4 134 aaKnown RBP16.04■□□□□ 0.16
RNF40-212ENST00000602784 NSMFQ6X4W1 530 aa16.04■□□□□ 0.16
RNF40-212ENST00000602784 RNF207Q6ZRF8 634 aa16.04■□□□□ 0.16
RNF40-212ENST00000602784 TEX2Q8IWB9 1127 aa16.04■□□□□ 0.16
RNF40-212ENST00000602784 TRIB2Q92519 343 aa16.04■□□□□ 0.16
RNF40-212ENST00000602784 MAML3Q96JK9 1138 aa16.04■□□□□ 0.16
RNF40-212ENST00000602784 NCOA5Q9HCD5 579 aaKnown RBP16.04■□□□□ 0.16
RNF40-212ENST00000602784 LIMCH1Q9UPQ0 1083 aa16.04■□□□□ 0.16
RNF40-212ENST00000602784 LOC102724159A0A0B4J2E5 919 aa16.03■□□□□ 0.16
RNF40-212ENST00000602784 hCG_1984214I3L0E3 225 aa16.03■□□□□ 0.16
RNF40-212ENST00000602784 CPLX1O14810 134 aa16.03■□□□□ 0.16
RNF40-212ENST00000602784 OPLAHO14841 1288 aa16.03■□□□□ 0.16
RNF40-212ENST00000602784 RPS6P62753 249 aaKnown RBP16.03■□□□□ 0.16
RNF40-212ENST00000602784 UBXN2AP68543 259 aa16.03■□□□□ 0.16
RNF40-212ENST00000602784 BAATQ14032 418 aaPredicted RBP16.03■□□□□ 0.16
RNF40-212ENST00000602784 PWP2Q15269 919 aaKnown RBP16.03■□□□□ 0.16
RNF40-212ENST00000602784 CCL14Q16627 93 aa16.03■□□□□ 0.16
RNF40-212ENST00000602784 ME3Q16798 604 aa16.03■□□□□ 0.16
RNF40-212ENST00000602784 MAP3K21Q5TCX8 1036 aa16.03■□□□□ 0.16
RNF40-212ENST00000602784 MFSD14CQ5VZR4 134 aa16.03■□□□□ 0.16
RNF40-212ENST00000602784 MAMDC4Q6UXC1 1216 aa16.03■□□□□ 0.16
RNF40-212ENST00000602784 ZNF713Q8N859 430 aaPredicted RBP16.03■□□□□ 0.16
RNF40-212ENST00000602784 SH3TC2Q8TF17 1288 aa16.03■□□□□ 0.16
RNF40-212ENST00000602784 PIBF1Q8WXW3 757 aa16.03■□□□□ 0.16
RNF40-212ENST00000602784 ABHD8Q96I13 439 aa16.03■□□□□ 0.16
RNF40-212ENST00000602784 ZNF333Q96JL9 665 aa16.03■□□□□ 0.16
RNF40-212ENST00000602784 RNF26Q9BY78 433 aaPredicted RBP16.03■□□□□ 0.16
RNF40-212ENST00000602784 BIN2Q9UBW5 565 aaPredicted RBP16.03■□□□□ 0.16
RNF40-212ENST00000602784 PTPDC1A2A3K4 754 aa16.02■□□□□ 0.16
RNF40-212ENST00000602784 ST18O60284 1047 aa16.02■□□□□ 0.16
RNF40-212ENST00000602784 CDKL5O76039 1030 aa16.02■□□□□ 0.16
RNF40-212ENST00000602784 INHAP05111 366 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms