RNA–Protein interactions for RNA: ENST00000602499.5

UBE2E3-207, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

TSL 2

Gene UBE2E3, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-207ENST00000602499 ZNF236Q9UL36 1845 aa25.44■■□□□ 1.66
UBE2E3-207ENST00000602499 SMCHD1A6NHR9 2005 aa25.44■■□□□ 1.66
UBE2E3-207ENST00000602499 ST18O60284 1047 aa25.43■■□□□ 1.66
UBE2E3-207ENST00000602499 ECM2O94769 699 aaPredicted RBP25.43■■□□□ 1.66
UBE2E3-207ENST00000602499 HOXC6P09630 235 aa25.43■■□□□ 1.66
UBE2E3-207ENST00000602499 XRCC5P13010 732 aaKnown RBP25.43■■□□□ 1.66
UBE2E3-207ENST00000602499 PRKCZQ05513 592 aa25.43■■□□□ 1.66
UBE2E3-207ENST00000602499 KCTD2Q14681 263 aa25.43■■□□□ 1.66
UBE2E3-207ENST00000602499 NTRK3Q16288 839 aa25.43■■□□□ 1.66
UBE2E3-207ENST00000602499 HOMER1Q86YM7 354 aa25.43■■□□□ 1.66
UBE2E3-207ENST00000602499 RGS22Q8NE09 1264 aa25.43■■□□□ 1.66
UBE2E3-207ENST00000602499 MMP19Q99542 508 aa25.43■■□□□ 1.66
UBE2E3-207ENST00000602499 SLKQ9H2G2 1235 aaPredicted RBP25.43■■□□□ 1.66
UBE2E3-207ENST00000602499 RBM27Q9P2N5 1060 aaKnown RBP25.43■■□□□ 1.66
UBE2E3-207ENST00000602499 LIMCH1Q9UPQ0 1083 aa25.43■■□□□ 1.66
UBE2E3-207ENST00000602499 PLXNB2O15031 1838 aa25.42■■□□□ 1.66
UBE2E3-207ENST00000602499 CNTNAP5Q8WYK1 1306 aa25.42■■□□□ 1.66
UBE2E3-207ENST00000602499 HTTP42858 3142 aa25.42■■□□□ 1.66
UBE2E3-207ENST00000602499 IFNAR1P17181 557 aa25.42■■□□□ 1.66
UBE2E3-207ENST00000602499 RGS2P41220 211 aa25.42■■□□□ 1.66
UBE2E3-207ENST00000602499 SLC4A3P48751 1232 aa25.42■■□□□ 1.66
UBE2E3-207ENST00000602499 CCT2P78371 535 aaKnown RBP25.42■■□□□ 1.66
UBE2E3-207ENST00000602499 MAP2K5Q13163 448 aa25.42■■□□□ 1.66
UBE2E3-207ENST00000602499 FBXO46Q6PJ61 603 aaPredicted RBP25.42■■□□□ 1.66
UBE2E3-207ENST00000602499 CCDC82Q8N4S0 544 aa25.42■■□□□ 1.66
UBE2E3-207ENST00000602499 HOMER2Q9NSB8 354 aa25.42■■□□□ 1.66
UBE2E3-207ENST00000602499 GABRQQ9UN88 632 aa25.42■■□□□ 1.66
UBE2E3-207ENST00000602499 MRPL11Q9Y3B7 192 aaKnown RBP25.42■■□□□ 1.66
UBE2E3-207ENST00000602499 PPP1R11O60927 126 aaPredicted RBP25.41■■□□□ 1.66
UBE2E3-207ENST00000602499 ADORA2AP29274 412 aa25.41■■□□□ 1.66
UBE2E3-207ENST00000602499 ME3Q16798 604 aa25.41■■□□□ 1.66
UBE2E3-207ENST00000602499 CPLX2Q6PUV4 134 aaKnown RBP25.41■■□□□ 1.66
UBE2E3-207ENST00000602499 CLEC4DQ8WXI8 215 aa25.41■■□□□ 1.66
UBE2E3-207ENST00000602499 MCOLN1Q9GZU1 580 aa25.41■■□□□ 1.66
UBE2E3-207ENST00000602499 SLC5A4Q9NY91 659 aa25.41■■□□□ 1.66
UBE2E3-207ENST00000602499 ZNFX1Q9P2E3 1918 aaKnown RBP25.41■■□□□ 1.66
UBE2E3-207ENST00000602499 PFASO15067 1338 aa25.4■■□□□ 1.66
UBE2E3-207ENST00000602499 TNRC18O15417 2968 aaPredicted RBP25.4■■□□□ 1.66
UBE2E3-207ENST00000602499 SCRN1Q12765 414 aa25.4■■□□□ 1.66
UBE2E3-207ENST00000602499 USH1GQ495M9 461 aa25.4■■□□□ 1.66
UBE2E3-207ENST00000602499 MUM1L1Q5H9M0 696 aa25.4■■□□□ 1.66
UBE2E3-207ENST00000602499 ANKRD35Q8N283 1001 aa25.4■■□□□ 1.66
UBE2E3-207ENST00000602499 SAMD3Q8N6K7 520 aa25.4■■□□□ 1.66
UBE2E3-207ENST00000602499 RAET1EQ8TD07 263 aa25.4■■□□□ 1.66
UBE2E3-207ENST00000602499 PXYLP1Q8TE99 480 aa25.4■■□□□ 1.66
UBE2E3-207ENST00000602499 ZSCAN31Q96LW9 406 aaPredicted RBP25.4■■□□□ 1.66
UBE2E3-207ENST00000602499 NCOA5Q9HCD5 579 aaKnown RBP25.4■■□□□ 1.66
UBE2E3-207ENST00000602499 DIS3Q9Y2L1 958 aaKnown RBP25.4■■□□□ 1.66
UBE2E3-207ENST00000602499 PCDHA1Q9Y5I3 950 aa25.4■■□□□ 1.66
UBE2E3-207ENST00000602499 DNAJC25-GNG10A0A024R161 153 aa25.39■■□□□ 1.66
UBE2E3-207ENST00000602499 CPLX1O14810 134 aa25.39■■□□□ 1.66
UBE2E3-207ENST00000602499 PRPF3O43395 683 aaKnown RBP25.39■■□□□ 1.66
UBE2E3-207ENST00000602499 MCM2P49736 904 aa25.39■■□□□ 1.66
UBE2E3-207ENST00000602499 MLLT1Q03111 559 aaPredicted RBP25.39■■□□□ 1.66
UBE2E3-207ENST00000602499 STK3Q13188 491 aa25.39■■□□□ 1.66
UBE2E3-207ENST00000602499 MCF2L2Q86YR7 1114 aa25.39■■□□□ 1.66
UBE2E3-207ENST00000602499 TRMT44Q8IYL2 757 aaKnown RBP25.39■■□□□ 1.66
UBE2E3-207ENST00000602499 RNF26Q9BY78 433 aaPredicted RBP25.39■■□□□ 1.66
UBE2E3-207ENST00000602499 A1CFQ9NQ94 594 aaKnown RBP25.39■■□□□ 1.66
UBE2E3-207ENST00000602499 V9GY48 417 aaPredicted RBP25.39■■□□□ 1.66
UBE2E3-207ENST00000602499 hCG_1984214I3L0E3 225 aa25.38■■□□□ 1.65
UBE2E3-207ENST00000602499 CDKL5O76039 1030 aa25.38■■□□□ 1.65
UBE2E3-207ENST00000602499 DPP9Q86TI2 863 aa25.38■■□□□ 1.65
UBE2E3-207ENST00000602499 ZNF713Q8N859 430 aaPredicted RBP25.38■■□□□ 1.65
UBE2E3-207ENST00000602499 GTF3C6Q969F1 213 aa25.38■■□□□ 1.65
UBE2E3-207ENST00000602499 DDX11Q96FC9 970 aa25.38■■□□□ 1.65
UBE2E3-207ENST00000602499 APBA2Q99767 749 aa25.38■■□□□ 1.65
UBE2E3-207ENST00000602499 SH2B1Q9NRF2 756 aaPredicted RBP25.38■■□□□ 1.65
UBE2E3-207ENST00000602499 MAP3K20Q9NYL2 800 aaKnown RBP25.38■■□□□ 1.65
UBE2E3-207ENST00000602499 GHRHRQ02643 423 aa25.37■■□□□ 1.65
UBE2E3-207ENST00000602499 SLAIN1Q8ND83 568 aa25.37■■□□□ 1.65
UBE2E3-207ENST00000602499 PIBF1Q8WXW3 757 aa25.37■■□□□ 1.65
UBE2E3-207ENST00000602499 CYP39A1Q9NYL5 469 aa25.37■■□□□ 1.65
UBE2E3-207ENST00000602499 PTCH2Q9Y6C5 1203 aa25.37■■□□□ 1.65
UBE2E3-207ENST00000602499 CENPFP49454 3210 aa25.37■■□□□ 1.65
UBE2E3-207ENST00000602499 NFIBO00712 420 aa25.36■■□□□ 1.65
UBE2E3-207ENST00000602499 COBLO75128 1261 aa25.36■■□□□ 1.65
UBE2E3-207ENST00000602499 TAL1P17542 331 aaPredicted RBP25.36■■□□□ 1.65
UBE2E3-207ENST00000602499 AKAP17AQ02040 695 aaKnown RBP25.36■■□□□ 1.65
UBE2E3-207ENST00000602499 ZNF792Q3KQV3 632 aa25.36■■□□□ 1.65
UBE2E3-207ENST00000602499 TEX2Q8IWB9 1127 aa25.36■■□□□ 1.65
UBE2E3-207ENST00000602499 TRIM22Q8IYM9 498 aa25.36■■□□□ 1.65
UBE2E3-207ENST00000602499 ADCY3O60266 1144 aa25.35■■□□□ 1.65
UBE2E3-207ENST00000602499 CYP2B6P20813 491 aa25.35■■□□□ 1.65
UBE2E3-207ENST00000602499 PFKFB3Q16875 520 aaPredicted RBP25.35■■□□□ 1.65
UBE2E3-207ENST00000602499 NOL8Q76FK4 1167 aaKnown RBP25.35■■□□□ 1.65
UBE2E3-207ENST00000602499 hCG_1642624A0A1W2PR95 340 aa25.34■■□□□ 1.65
UBE2E3-207ENST00000602499 LARGE1O95461 756 aa25.34■■□□□ 1.65
UBE2E3-207ENST00000602499 PGK2P07205 417 aa25.34■■□□□ 1.65
UBE2E3-207ENST00000602499 SSRP1Q08945 709 aaKnown RBP25.34■■□□□ 1.65
UBE2E3-207ENST00000602499 OLFML2BQ68BL8 750 aa25.34■■□□□ 1.65
UBE2E3-207ENST00000602499 NSMFQ6X4W1 530 aa25.34■■□□□ 1.65
UBE2E3-207ENST00000602499 RNF207Q6ZRF8 634 aa25.34■■□□□ 1.65
UBE2E3-207ENST00000602499 ZNF467Q7Z7K2 595 aaPredicted RBP25.34■■□□□ 1.65
UBE2E3-207ENST00000602499 MSL3Q8N5Y2 521 aaKnown RBP25.34■■□□□ 1.65
UBE2E3-207ENST00000602499 FAM133AQ8N9E0 248 aa25.34■■□□□ 1.65
UBE2E3-207ENST00000602499 PHKBQ93100 1093 aa25.34■■□□□ 1.65
UBE2E3-207ENST00000602499 POTEB2H3BUK9 544 aa25.33■■□□□ 1.65
UBE2E3-207ENST00000602499 OPLAHO14841 1288 aa25.33■■□□□ 1.65
UBE2E3-207ENST00000602499 IGHA2P01877 340 aa25.33■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms