RNA–Protein interactions for RNA: ENST00000602308.1

TRIM11-205, Transcript of tripartite motif containing 11, humanhuman

TSL 3

Gene TRIM11, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11-205ENST00000602308 PLXNA3P51805 1871 aa17.43■□□□□ 0.38
TRIM11-205ENST00000602308 SOWAHBA6NEL2 793 aa17.42■□□□□ 0.38
TRIM11-205ENST00000602308 PROB1E7EW31 1015 aa17.42■□□□□ 0.38
TRIM11-205ENST00000602308 SRGAP3O43295 1099 aa17.42■□□□□ 0.38
TRIM11-205ENST00000602308 IGSF3O75054 1194 aa17.42■□□□□ 0.38
TRIM11-205ENST00000602308 RGS20O76081 388 aa17.42■□□□□ 0.38
TRIM11-205ENST00000602308 AKR1B1P15121 316 aa17.42■□□□□ 0.38
TRIM11-205ENST00000602308 SLC4A3P48751 1232 aa17.42■□□□□ 0.38
TRIM11-205ENST00000602308 FAM83BQ5T0W9 1011 aa17.42■□□□□ 0.38
TRIM11-205ENST00000602308 EP400NLQ6ZTU2 488 aa17.42■□□□□ 0.38
TRIM11-205ENST00000602308 CERS3Q8IU89 383 aa17.42■□□□□ 0.38
TRIM11-205ENST00000602308 FBXL6Q8N531 539 aa17.42■□□□□ 0.38
TRIM11-205ENST00000602308 SSH1Q8WYL5 1049 aa17.42■□□□□ 0.38
TRIM11-205ENST00000602308 MRPL38Q96DV4 380 aaKnown RBP17.42■□□□□ 0.38
TRIM11-205ENST00000602308 RAD9AQ99638 391 aa17.42■□□□□ 0.38
TRIM11-205ENST00000602308 ZFHX4Q86UP3 3567 aa17.41■□□□□ 0.38
TRIM11-205ENST00000602308 PITPNM1O00562 1244 aa17.41■□□□□ 0.38
TRIM11-205ENST00000602308 GJB5O95377 273 aa17.41■□□□□ 0.38
TRIM11-205ENST00000602308 VCPP55072 806 aaKnown RBP17.41■□□□□ 0.38
TRIM11-205ENST00000602308 SMAD2Q15796 467 aaKnown RBP17.41■□□□□ 0.38
TRIM11-205ENST00000602308 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.41■□□□□ 0.389e-8■■■■■ 32.5
TRIM11-205ENST00000602308 ANKRD35Q8N283 1001 aa17.41■□□□□ 0.38
TRIM11-205ENST00000602308 C17orf80Q9BSJ5 609 aa17.41■□□□□ 0.38
TRIM11-205ENST00000602308 COL4A6Q14031 1691 aa17.41■□□□□ 0.38
TRIM11-205ENST00000602308 KMT2EQ8IZD2 1858 aa17.41■□□□□ 0.38
TRIM11-205ENST00000602308 EPG5Q9HCE0 2579 aa17.4■□□□□ 0.38
TRIM11-205ENST00000602308 SIP14410 1827 aa17.4■□□□□ 0.38
TRIM11-205ENST00000602308 LTBRP36941 435 aa17.4■□□□□ 0.38
TRIM11-205ENST00000602308 CNTN2Q02246 1040 aa17.4■□□□□ 0.38
TRIM11-205ENST00000602308 GPNMBQ14956 572 aa17.4■□□□□ 0.38
TRIM11-205ENST00000602308 TCEAL5Q5H9L2 206 aa17.4■□□□□ 0.38
TRIM11-205ENST00000602308 RETREG2Q8NC44 543 aa17.4■□□□□ 0.38
TRIM11-205ENST00000602308 BANK1Q8NDB2 785 aa17.4■□□□□ 0.38
TRIM11-205ENST00000602308 FBXO22Q8NEZ5 403 aa17.4■□□□□ 0.38
TRIM11-205ENST00000602308 PPP1R13LQ8WUF5 828 aa17.4■□□□□ 0.38
TRIM11-205ENST00000602308 DBNDD2Q9BQY9 259 aa17.4■□□□□ 0.38
TRIM11-205ENST00000602308 PDGFCQ9NRA1 345 aa17.4■□□□□ 0.38
TRIM11-205ENST00000602308 TRPC6Q9Y210 931 aa17.4■□□□□ 0.38
TRIM11-205ENST00000602308 DDX49Q9Y6V7 483 aaKnown RBP17.4■□□□□ 0.38
TRIM11-205ENST00000602308 PRR23AA6NEV1 266 aa17.39■□□□□ 0.37
TRIM11-205ENST00000602308 H0Y858 1186 aa17.39■□□□□ 0.37
TRIM11-205ENST00000602308 RBAK-RBAKDNI3L0D1 243 aa17.39■□□□□ 0.37
TRIM11-205ENST00000602308 IDH1O75874 414 aaKnown RBP17.39■□□□□ 0.37
TRIM11-205ENST00000602308 CYP2D6P10635 497 aa17.39■□□□□ 0.37
TRIM11-205ENST00000602308 EEF2P13639 858 aaKnown RBP17.39■□□□□ 0.37
TRIM11-205ENST00000602308 CCDC158Q5M9N0 1113 aa17.39■□□□□ 0.37
TRIM11-205ENST00000602308 CPXCR1Q8N123 301 aa17.39■□□□□ 0.37
TRIM11-205ENST00000602308 DYNLL2Q96FJ2 89 aa17.39■□□□□ 0.37
TRIM11-205ENST00000602308 POP1Q99575 1024 aaKnown RBP17.39■□□□□ 0.37
TRIM11-205ENST00000602308 MEIS3Q99687 375 aa17.39■□□□□ 0.37
TRIM11-205ENST00000602308 RIOK1Q9BRS2 568 aaKnown RBP17.39■□□□□ 0.37
TRIM11-205ENST00000602308 IRF2BPLQ9H1B7 796 aa17.39■□□□□ 0.37
TRIM11-205ENST00000602308 TLR9Q9NR96 1032 aa17.39■□□□□ 0.37
TRIM11-205ENST00000602308 MCM9Q9NXL9 1143 aa17.39■□□□□ 0.37
TRIM11-205ENST00000602308 CTNNA3Q9UI47 895 aa17.39■□□□□ 0.37
TRIM11-205ENST00000602308 VPS13AQ96RL7 3174 aa17.39■□□□□ 0.37
TRIM11-205ENST00000602308 ATP2A1O14983 1001 aa17.38■□□□□ 0.37
TRIM11-205ENST00000602308 TCTN1Q2MV58 587 aa17.38■□□□□ 0.37
TRIM11-205ENST00000602308 TIGD5Q53EQ6 642 aa17.38■□□□□ 0.37
TRIM11-205ENST00000602308 SLF1Q9BQI6 1058 aa17.38■□□□□ 0.37
TRIM11-205ENST00000602308 CLDND1Q9NY35 253 aa17.38■□□□□ 0.37
TRIM11-205ENST00000602308 HDAC5Q9UQL6 1122 aa17.38■□□□□ 0.37
TRIM11-205ENST00000602308 Q9Y3F1 56 aa17.38■□□□□ 0.37
TRIM11-205ENST00000602308 MED19A0JLT2 244 aaPredicted RBP17.37■□□□□ 0.37
TRIM11-205ENST00000602308 MBTPS2O43462 519 aa17.37■□□□□ 0.37
TRIM11-205ENST00000602308 RAD21O60216 631 aa17.37■□□□□ 0.37
TRIM11-205ENST00000602308 ZXDAP98168 799 aa17.37■□□□□ 0.37
TRIM11-205ENST00000602308 MTX1Q13505 466 aa17.37■□□□□ 0.37
TRIM11-205ENST00000602308 CLUL1Q15846 466 aa17.37■□□□□ 0.37
TRIM11-205ENST00000602308 PTPROQ16827 1216 aa17.37■□□□□ 0.37
TRIM11-205ENST00000602308 TAPT1Q6NXT6 567 aa17.37■□□□□ 0.37
TRIM11-205ENST00000602308 FAM117BQ6P1L5 589 aa17.37■□□□□ 0.37
TRIM11-205ENST00000602308 FAM133AQ8N9E0 248 aa17.37■□□□□ 0.37
TRIM11-205ENST00000602308 NUP88Q99567 741 aaPredicted RBP17.37■□□□□ 0.37
TRIM11-205ENST00000602308 FSD1Q9BTV5 496 aa17.37■□□□□ 0.37
TRIM11-205ENST00000602308 TANC1Q9C0D5 1861 aa17.37■□□□□ 0.37
TRIM11-205ENST00000602308 DNAH14Q0VDD8 3507 aa17.36■□□□□ 0.37
TRIM11-205ENST00000602308 AVPR2P30518 371 aa17.36■□□□□ 0.37
TRIM11-205ENST00000602308 PURAQ00577 322 aaKnown RBP17.36■□□□□ 0.37
TRIM11-205ENST00000602308 DLX2Q07687 328 aaPredicted RBP17.36■□□□□ 0.37
TRIM11-205ENST00000602308 FAM47CQ5HY64 1035 aa17.36■□□□□ 0.37
TRIM11-205ENST00000602308 IQSEC1Q6DN90 963 aa17.36■□□□□ 0.37
TRIM11-205ENST00000602308 ZNF512BQ96KM6 892 aaPredicted RBP17.36■□□□□ 0.37
TRIM11-205ENST00000602308 RAVER2Q9HCJ3 691 aaKnown RBP17.36■□□□□ 0.37
TRIM11-205ENST00000602308 SWAP70Q9UH65 585 aa17.36■□□□□ 0.37
TRIM11-205ENST00000602308 KMT2BQ9UMN6 2715 aaPredicted RBP17.36■□□□□ 0.37
TRIM11-205ENST00000602308 MYO7AQ13402 2215 aa17.35■□□□□ 0.37
TRIM11-205ENST00000602308 GVINP1Q7Z2Y8 2422 aa17.35■□□□□ 0.37
TRIM11-205ENST00000602308 BFSP2Q13515 415 aa17.35■□□□□ 0.37
TRIM11-205ENST00000602308 NBPF20Q3BBV1 942 aa17.35■□□□□ 0.37
TRIM11-205ENST00000602308 RPAINQ86UA6 219 aa17.35■□□□□ 0.37
TRIM11-205ENST00000602308 CRBNQ96SW2 442 aa17.35■□□□□ 0.37
TRIM11-205ENST00000602308 GOPCQ9HD26 462 aa17.35■□□□□ 0.37
TRIM11-205ENST00000602308 STXBP3O00186 592 aa17.34■□□□□ 0.37
TRIM11-205ENST00000602308 G3BP1Q13283 466 aaKnown RBP eCLIP17.34■□□□□ 0.37
TRIM11-205ENST00000602308 CTC1Q2NKJ3 1217 aa17.34■□□□□ 0.37
TRIM11-205ENST00000602308 TNNI3KQ59H18 835 aa17.34■□□□□ 0.37
TRIM11-205ENST00000602308 EEPD1Q7L9B9 569 aa17.34■□□□□ 0.37
TRIM11-205ENST00000602308 FBXO16Q8IX29 292 aaPredicted RBP17.34■□□□□ 0.37
TRIM11-205ENST00000602308 CHST13Q8NET6 341 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms