RNA–Protein interactions for RNA: ENST00000602029.1

VRK3-226, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 578 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-226ENST00000602029 SIAH1Q8IUQ4 282 aa6.16□□□□□ -1.42
VRK3-226ENST00000602029 MSL3Q8N5Y2 521 aaKnown RBP6.16□□□□□ -1.42
VRK3-226ENST00000602029 CHST13Q8NET6 341 aa6.16□□□□□ -1.42
VRK3-226ENST00000602029 TOX2Q96NM4 488 aa6.16□□□□□ -1.42
VRK3-226ENST00000602029 CRBNQ96SW2 442 aa6.16□□□□□ -1.42
VRK3-226ENST00000602029 HAUS7Q99871 368 aa6.16□□□□□ -1.42
VRK3-226ENST00000602029 FTOQ9C0B1 505 aaKnown RBP eCLIP6.16□□□□□ -1.42
VRK3-226ENST00000602029 PUS7LQ9H0K6 701 aaKnown RBP6.16□□□□□ -1.42
VRK3-226ENST00000602029 ACAD9Q9H845 621 aa6.16□□□□□ -1.42
VRK3-226ENST00000602029 CERS4Q9HA82 394 aa6.16□□□□□ -1.42
VRK3-226ENST00000602029 RNF146Q9NTX7 359 aa6.16□□□□□ -1.42
VRK3-226ENST00000602029 FEM1BQ9UK73 627 aa6.16□□□□□ -1.42
VRK3-226ENST00000602029 ZNF214Q9UL59 606 aaPredicted RBP6.16□□□□□ -1.42
VRK3-226ENST00000602029 STX8Q9UNK0 236 aa6.16□□□□□ -1.42
VRK3-226ENST00000602029 RIPK3Q9Y572 518 aa6.16□□□□□ -1.42
VRK3-226ENST00000602029 SLC4A7Q9Y6M7 1214 aa6.16□□□□□ -1.42
VRK3-226ENST00000602029 ELP1O95163 1332 aa6.16□□□□□ -1.42
VRK3-226ENST00000602029 FOCADQ5VW36 1801 aa6.15□□□□□ -1.42
VRK3-226ENST00000602029 PTPDC1A2A3K4 754 aa6.15□□□□□ -1.42
VRK3-226ENST00000602029 ASB14A6NK59 587 aa6.15□□□□□ -1.42
VRK3-226ENST00000602029 TSPY2A6NKD2 308 aa6.15□□□□□ -1.42
VRK3-226ENST00000602029 BMP3P12645 472 aa6.15□□□□□ -1.42
VRK3-226ENST00000602029 RASA1P20936 1047 aa6.15□□□□□ -1.42
VRK3-226ENST00000602029 ANP32AP39687 249 aaKnown RBP6.15□□□□□ -1.42
VRK3-226ENST00000602029 STAT2P52630 851 aa6.15□□□□□ -1.42
VRK3-226ENST00000602029 SNAP25P60880 206 aa6.15□□□□□ -1.42
VRK3-226ENST00000602029 PSMC6P62333 389 aa6.15□□□□□ -1.42
VRK3-226ENST00000602029 CNTN2Q02246 1040 aa6.15□□□□□ -1.42
VRK3-226ENST00000602029 ITGA7Q13683 1181 aa6.15□□□□□ -1.42
VRK3-226ENST00000602029 AAK1Q2M2I8 961 aa6.15□□□□□ -1.42
VRK3-226ENST00000602029 BRDTQ58F21 947 aaPredicted RBP6.15□□□□□ -1.42
VRK3-226ENST00000602029 RRP12Q5JTH9 1297 aaKnown RBP6.15□□□□□ -1.42
VRK3-226ENST00000602029 TMEM240Q5SV17 173 aa6.15□□□□□ -1.42
VRK3-226ENST00000602029 TSHZ3Q63HK5 1081 aa6.15□□□□□ -1.42
VRK3-226ENST00000602029 KIAA1211Q6ZU35 1233 aa6.15□□□□□ -1.42
VRK3-226ENST00000602029 FBXO16Q8IX29 292 aaPredicted RBP6.15□□□□□ -1.42
VRK3-226ENST00000602029 RPUSD2Q8IZ73 545 aaKnown RBP6.15□□□□□ -1.42
VRK3-226ENST00000602029 CHURC1Q8WUH1 139 aa6.15□□□□□ -1.42
VRK3-226ENST00000602029 ATXN2LQ8WWM7 1075 aaKnown RBP6.15□□□□□ -1.42
VRK3-226ENST00000602029 CEP95Q96GE4 821 aa6.15□□□□□ -1.42
VRK3-226ENST00000602029 TRERF1Q96PN7 1200 aa6.15□□□□□ -1.42
VRK3-226ENST00000602029 MPHOSPH6Q99547 160 aaKnown RBP6.15□□□□□ -1.42
VRK3-226ENST00000602029 FSD1Q9BTV5 496 aa6.15□□□□□ -1.42
VRK3-226ENST00000602029 C1QTNF1Q9BXJ1 281 aa6.15□□□□□ -1.42
VRK3-226ENST00000602029 NAPBQ9H115 298 aa6.15□□□□□ -1.42
VRK3-226ENST00000602029 IL23AQ9NPF7 189 aa6.15□□□□□ -1.42
VRK3-226ENST00000602029 ECHDC1Q9NTX5 307 aa6.15□□□□□ -1.42
VRK3-226ENST00000602029 NYAP2Q9P242 653 aa6.15□□□□□ -1.42
VRK3-226ENST00000602029 TBX21Q9UL17 535 aa6.15□□□□□ -1.42
VRK3-226ENST00000602029 CCPG1Q9ULG6 757 aa6.15□□□□□ -1.42
VRK3-226ENST00000602029 ZNF236Q9UL36 1845 aa6.15□□□□□ -1.43
VRK3-226ENST00000602029 CDK5RAP2Q96SN8 1893 aa6.15□□□□□ -1.43
VRK3-226ENST00000602029 DCHS1Q96JQ0 3298 aa6.14□□□□□ -1.43
VRK3-226ENST00000602029 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.14□□□□□ -1.43
VRK3-226ENST00000602029 RNF113AO15541 343 aaKnown RBP6.14□□□□□ -1.43
VRK3-226ENST00000602029 GPAA1O43292 621 aa6.14□□□□□ -1.43
VRK3-226ENST00000602029 RANBP6O60518 1105 aaKnown RBP6.14□□□□□ -1.43
VRK3-226ENST00000602029 CABYRO75952 493 aa6.14□□□□□ -1.43
VRK3-226ENST00000602029 ACTN1P12814 892 aa6.14□□□□□ -1.43
VRK3-226ENST00000602029 MYOGP15173 224 aa6.14□□□□□ -1.43
VRK3-226ENST00000602029 ATP2A2P16615 1042 aaKnown RBP6.14□□□□□ -1.43
VRK3-226ENST00000602029 GNAT2P19087 354 aa6.14□□□□□ -1.43
VRK3-226ENST00000602029 MCCP23508 829 aa6.14□□□□□ -1.43
VRK3-226ENST00000602029 GJA9P57773 515 aa6.14□□□□□ -1.43
VRK3-226ENST00000602029 TFAP4Q01664 338 aa6.14□□□□□ -1.43
VRK3-226ENST00000602029 TMEM67Q5HYA8 995 aa6.14□□□□□ -1.43
VRK3-226ENST00000602029 PPP4R3BQ5MIZ7 849 aa6.14□□□□□ -1.43
VRK3-226ENST00000602029 AKNAD1Q5T1N1 836 aa6.14□□□□□ -1.43
VRK3-226ENST00000602029 B4GALNT3Q6L9W6 998 aa6.14□□□□□ -1.43
VRK3-226ENST00000602029 MAMDC4Q6UXC1 1216 aa6.14□□□□□ -1.43
VRK3-226ENST00000602029 KCTD1Q719H9 257 aa6.14□□□□□ -1.43
VRK3-226ENST00000602029 FAM160B2Q86V87 743 aa6.14□□□□□ -1.43
VRK3-226ENST00000602029 FAM126BQ8IXS8 530 aa6.14□□□□□ -1.43
VRK3-226ENST00000602029 RETREG2Q8NC44 543 aa6.14□□□□□ -1.43
VRK3-226ENST00000602029 KLHDC9Q8NEP7 349 aa6.14□□□□□ -1.43
VRK3-226ENST00000602029 REPS2Q8NFH8 660 aa6.14□□□□□ -1.43
VRK3-226ENST00000602029 APPBP2Q92624 585 aa6.14□□□□□ -1.43
VRK3-226ENST00000602029 SCLYQ96I15 445 aa6.14□□□□□ -1.43
VRK3-226ENST00000602029 AGBL1Q96MI9 1066 aa6.14□□□□□ -1.43
VRK3-226ENST00000602029 ZBED2Q9BTP6 218 aa6.14□□□□□ -1.43
VRK3-226ENST00000602029 TRPV6Q9H1D0 765 aa6.14□□□□□ -1.43
VRK3-226ENST00000602029 CXXC1Q9P0U4 656 aaPredicted RBP6.14□□□□□ -1.43
VRK3-226ENST00000602029 ADAMTS5Q9UNA0 930 aa6.14□□□□□ -1.43
VRK3-226ENST00000602029 DDX49Q9Y6V7 483 aaKnown RBP6.14□□□□□ -1.43
VRK3-226ENST00000602029 RAD50Q92878 1312 aa6.14□□□□□ -1.43
VRK3-226ENST00000602029 SMCHD1A6NHR9 2005 aa6.14□□□□□ -1.43
VRK3-226ENST00000602029 ROBO3Q96MS0 1386 aa6.14□□□□□ -1.43
VRK3-226ENST00000602029 C5orf42Q9H799 3197 aa6.14□□□□□ -1.43
VRK3-226ENST00000602029 MYO5AQ9Y4I1 1855 aaKnown RBP6.13□□□□□ -1.43
VRK3-226ENST00000602029 TRANK1O15050 2925 aa6.13□□□□□ -1.43
VRK3-226ENST00000602029 GSG1L2A8MUP6 293 aa6.13□□□□□ -1.43
VRK3-226ENST00000602029 KIF28PB7ZC32 967 aa6.13□□□□□ -1.43
VRK3-226ENST00000602029 M0R2C6 588 aa6.13□□□□□ -1.43
VRK3-226ENST00000602029 ERC2O15083 957 aa6.13□□□□□ -1.43
VRK3-226ENST00000602029 ADCY6O43306 1168 aa6.13□□□□□ -1.43
VRK3-226ENST00000602029 IGHA2P01877 340 aa6.13□□□□□ -1.43
VRK3-226ENST00000602029 ZFYP08048 801 aaPredicted RBP6.13□□□□□ -1.43
VRK3-226ENST00000602029 SUPT20HL2P0C7V6 817 aa6.13□□□□□ -1.43
VRK3-226ENST00000602029 FDX1P10109 184 aa6.13□□□□□ -1.43
VRK3-226ENST00000602029 CYP2C9P11712 490 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms