RNA–Protein interactions for RNA: ENST00000600729.1

MIA-RAB4B-201, Transcript of MIA-RAB4B readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 5 BASIC

Gene MIA-RAB4B, Length 1,229 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIA-RAB4B-201ENST00000600729 TACC3Q9Y6A5 838 aa12.09□□□□□ -0.47
MIA-RAB4B-201ENST00000600729 DDX49Q9Y6V7 483 aaKnown RBP12.09□□□□□ -0.47
MIA-RAB4B-201ENST00000600729 MINDY4BA8MYZ0 360 aa12.08□□□□□ -0.48
MIA-RAB4B-201ENST00000600729 F5H6K3 240 aa12.08□□□□□ -0.48
MIA-RAB4B-201ENST00000600729 KIAA0355O15063 1070 aa12.08□□□□□ -0.48
MIA-RAB4B-201ENST00000600729 CTAGE5O15320 804 aa12.08□□□□□ -0.48
MIA-RAB4B-201ENST00000600729 GPAA1O43292 621 aa12.08□□□□□ -0.48
MIA-RAB4B-201ENST00000600729 PQBP1O60828 265 aaKnown RBP12.08□□□□□ -0.48
MIA-RAB4B-201ENST00000600729 CLTBP09497 229 aa12.08□□□□□ -0.48
MIA-RAB4B-201ENST00000600729 RARBP10826 455 aa12.08□□□□□ -0.48
MIA-RAB4B-201ENST00000600729 KLRC3Q07444 240 aa12.08□□□□□ -0.48
MIA-RAB4B-201ENST00000600729 RAB30Q15771 203 aa12.08□□□□□ -0.48
MIA-RAB4B-201ENST00000600729 SNRNP48Q6IEG0 339 aaKnown RBP12.08□□□□□ -0.48
MIA-RAB4B-201ENST00000600729 POTEDQ86YR6 584 aa12.08□□□□□ -0.48
MIA-RAB4B-201ENST00000600729 LRRC47Q8N1G4 583 aaKnown RBP12.08□□□□□ -0.48
MIA-RAB4B-201ENST00000600729 APPBP2Q92624 585 aa12.08□□□□□ -0.48
MIA-RAB4B-201ENST00000600729 CEP95Q96GE4 821 aa12.08□□□□□ -0.48
MIA-RAB4B-201ENST00000600729 NKX2-4Q9H2Z4 354 aa12.08□□□□□ -0.48
MIA-RAB4B-201ENST00000600729 RAVER2Q9HCJ3 691 aaKnown RBP12.08□□□□□ -0.48
MIA-RAB4B-201ENST00000600729 GOPCQ9HD26 462 aa12.08□□□□□ -0.48
MIA-RAB4B-201ENST00000600729 ECHDC1Q9NTX5 307 aa12.08□□□□□ -0.48
MIA-RAB4B-201ENST00000600729 SLC5A4Q9NY91 659 aa12.08□□□□□ -0.48
MIA-RAB4B-201ENST00000600729 NYAP2Q9P242 653 aa12.08□□□□□ -0.48
MIA-RAB4B-201ENST00000600729 NRBP1Q9UHY1 535 aa12.08□□□□□ -0.48
MIA-RAB4B-201ENST00000600729 MSRAQ9UJ68 235 aa12.08□□□□□ -0.48
MIA-RAB4B-201ENST00000600729 RALYQ9UKM9 306 aaKnown RBP12.08□□□□□ -0.48
MIA-RAB4B-201ENST00000600729 ASTN1O14525 1302 aa12.08□□□□□ -0.48
MIA-RAB4B-201ENST00000600729 PLIN4Q96Q06 1357 aa12.07□□□□□ -0.48
MIA-RAB4B-201ENST00000600729 POTEB3A0JP26 581 aa12.07□□□□□ -0.48
MIA-RAB4B-201ENST00000600729 MS4A1P11836 297 aa12.07□□□□□ -0.48
MIA-RAB4B-201ENST00000600729 AKR1A1P14550 325 aa12.07□□□□□ -0.48
MIA-RAB4B-201ENST00000600729 ACLYP53396 1101 aa12.07□□□□□ -0.48
MIA-RAB4B-201ENST00000600729 POTEBQ6S5H4 581 aa12.07□□□□□ -0.48
MIA-RAB4B-201ENST00000600729 MAMDC4Q6UXC1 1216 aa12.07□□□□□ -0.48
MIA-RAB4B-201ENST00000600729 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.07□□□□□ -0.48
MIA-RAB4B-201ENST00000600729 CPXCR1Q8N123 301 aa12.07□□□□□ -0.48
MIA-RAB4B-201ENST00000600729 PRRX2Q99811 253 aa12.07□□□□□ -0.48
MIA-RAB4B-201ENST00000600729 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.07□□□□□ -0.48
MIA-RAB4B-201ENST00000600729 TEX13BQ9BXU2 312 aa12.07□□□□□ -0.48
MIA-RAB4B-201ENST00000600729 SLC28A3Q9HAS3 691 aa12.07□□□□□ -0.48
MIA-RAB4B-201ENST00000600729 MTCH2Q9Y6C9 303 aa12.07□□□□□ -0.48
MIA-RAB4B-201ENST00000600729 ASPMQ8IZT6 3477 aa12.06□□□□□ -0.48
MIA-RAB4B-201ENST00000600729 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.06□□□□□ -0.48
MIA-RAB4B-201ENST00000600729 SOWAHBA6NEL2 793 aa12.06□□□□□ -0.48
MIA-RAB4B-201ENST00000600729 ATP2A1O14983 1001 aa12.06□□□□□ -0.48
MIA-RAB4B-201ENST00000600729 RNF113AO15541 343 aaKnown RBP12.06□□□□□ -0.48
MIA-RAB4B-201ENST00000600729 KCNA4P22459 653 aa12.06□□□□□ -0.48
MIA-RAB4B-201ENST00000600729 TMEM63BQ5T3F8 832 aa12.06□□□□□ -0.48
MIA-RAB4B-201ENST00000600729 C16orf59Q7L2K0 433 aa12.06□□□□□ -0.48
MIA-RAB4B-201ENST00000600729 ASCL5Q7RTU5 278 aa12.06□□□□□ -0.48
MIA-RAB4B-201ENST00000600729 RNF180Q86T96 592 aa12.06□□□□□ -0.48
MIA-RAB4B-201ENST00000600729 PI4K2BQ8TCG2 481 aa12.06□□□□□ -0.48
MIA-RAB4B-201ENST00000600729 CHMP4CQ96CF2 233 aa12.06□□□□□ -0.48
MIA-RAB4B-201ENST00000600729 DCTPP1Q9H773 170 aa12.06□□□□□ -0.48
MIA-RAB4B-201ENST00000600729 SLC38A10Q9HBR0 1119 aa12.06□□□□□ -0.48
MIA-RAB4B-201ENST00000600729 INCENPQ9NQS7 918 aa12.06□□□□□ -0.48
MIA-RAB4B-201ENST00000600729 CLIP2Q9UDT6 1046 aa12.06□□□□□ -0.48
MIA-RAB4B-201ENST00000600729 ZHX1Q9UKY1 873 aaPredicted RBP12.06□□□□□ -0.48
MIA-RAB4B-201ENST00000600729 TBX21Q9UL17 535 aa12.06□□□□□ -0.48
MIA-RAB4B-201ENST00000600729 SCN5AQ14524 2016 aa12.06□□□□□ -0.48
MIA-RAB4B-201ENST00000600729 ZNF536O15090 1300 aa12.06□□□□□ -0.48
MIA-RAB4B-201ENST00000600729 SLC4A3P48751 1232 aa12.05□□□□□ -0.48
MIA-RAB4B-201ENST00000600729 CNTN2Q02246 1040 aa12.05□□□□□ -0.48
MIA-RAB4B-201ENST00000600729 KCNA10Q16322 511 aa12.05□□□□□ -0.48
MIA-RAB4B-201ENST00000600729 RASIP1Q5U651 963 aa12.05□□□□□ -0.48
MIA-RAB4B-201ENST00000600729 ZSCAN25Q6NSZ9 544 aa12.05□□□□□ -0.48
MIA-RAB4B-201ENST00000600729 GIMAP6Q6P9H5 292 aa12.05□□□□□ -0.48
MIA-RAB4B-201ENST00000600729 ANKRD33Q7Z3H0 272 aa12.05□□□□□ -0.48
MIA-RAB4B-201ENST00000600729 AMOTL1Q8IY63 956 aa12.05□□□□□ -0.48
MIA-RAB4B-201ENST00000600729 MKL1Q969V6 931 aa12.05□□□□□ -0.48
MIA-RAB4B-201ENST00000600729 KIFC2Q96AC6 838 aa12.05□□□□□ -0.48
MIA-RAB4B-201ENST00000600729 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.05□□□□□ -0.48
MIA-RAB4B-201ENST00000600729 MTMR4Q9NYA4 1195 aa12.05□□□□□ -0.48
MIA-RAB4B-201ENST00000600729 YBX2Q9Y2T7 364 aaKnown RBP12.05□□□□□ -0.48
MIA-RAB4B-201ENST00000600729 COL4A4P53420 1690 aaPredicted RBP12.05□□□□□ -0.48
MIA-RAB4B-201ENST00000600729 RBAK-RBAKDNI3L0D1 243 aa12.04□□□□□ -0.48
MIA-RAB4B-201ENST00000600729 RAG1P15918 1043 aa12.04□□□□□ -0.48
MIA-RAB4B-201ENST00000600729 POU3F3P20264 500 aaPredicted RBP12.04□□□□□ -0.48
MIA-RAB4B-201ENST00000600729 CST5P28325 142 aaPredicted RBP12.04□□□□□ -0.48
MIA-RAB4B-201ENST00000600729 CDK7P50613 346 aa12.04□□□□□ -0.48
MIA-RAB4B-201ENST00000600729 SNAP25P60880 206 aa12.04□□□□□ -0.48
MIA-RAB4B-201ENST00000600729 ACVR2BQ13705 512 aa12.04□□□□□ -0.48
MIA-RAB4B-201ENST00000600729 ST3GAL2Q16842 350 aa12.04□□□□□ -0.48
MIA-RAB4B-201ENST00000600729 CCDC144BQ3MJ40 725 aa12.04□□□□□ -0.48
MIA-RAB4B-201ENST00000600729 ARMCX2Q7L311 632 aa12.04□□□□□ -0.48
MIA-RAB4B-201ENST00000600729 IFNL3Q8IZI9 196 aa12.04□□□□□ -0.48
MIA-RAB4B-201ENST00000600729 PRPF38AQ8NAV1 312 aaKnown RBP12.04□□□□□ -0.48
MIA-RAB4B-201ENST00000600729 DDRGK1Q96HY6 314 aa12.04□□□□□ -0.48
MIA-RAB4B-201ENST00000600729 TSEN34Q9BSV6 310 aaKnown RBP12.04□□□□□ -0.48
MIA-RAB4B-201ENST00000600729 UPF3AQ9H1J1 476 aaKnown RBP12.04□□□□□ -0.48
MIA-RAB4B-201ENST00000600729 MKNK2Q9HBH9 465 aa12.04□□□□□ -0.48
MIA-RAB4B-201ENST00000600729 STARD7Q9NQZ5 370 aa12.04□□□□□ -0.48
MIA-RAB4B-201ENST00000600729 PCDHB15Q9Y5E8 787 aa12.04□□□□□ -0.48
MIA-RAB4B-201ENST00000600729 SALL3Q9BXA9 1300 aa12.04□□□□□ -0.48
MIA-RAB4B-201ENST00000600729 PTPRSQ13332 1948 aa12.03□□□□□ -0.48
MIA-RAB4B-201ENST00000600729 GTPBP6O43824 516 aaPredicted RBP12.03□□□□□ -0.48
MIA-RAB4B-201ENST00000600729 NMT2O60551 498 aa12.03□□□□□ -0.48
MIA-RAB4B-201ENST00000600729 DUSP11O75319 330 aaKnown RBP12.03□□□□□ -0.48
MIA-RAB4B-201ENST00000600729 ASGR1P07306 291 aa12.03□□□□□ -0.48
MIA-RAB4B-201ENST00000600729 COPB2P35606 906 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms