RNA–Protein interactions for RNA: ENST00000600244.5

SSBP4-207, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-207ENST00000600244 PRPF38AQ8NAV1 312 aaKnown RBP21.25■□□□□ 0.99
SSBP4-207ENST00000600244 CHST13Q8NET6 341 aa21.25■□□□□ 0.99
SSBP4-207ENST00000600244 NUP88Q99567 741 aaPredicted RBP21.25■□□□□ 0.99
SSBP4-207ENST00000600244 FBXO40Q9UH90 709 aa21.25■□□□□ 0.99
SSBP4-207ENST00000600244 BAIAP3O94812 1187 aa21.24■□□□□ 0.99
SSBP4-207ENST00000600244 SLC4A3P48751 1232 aa21.24■□□□□ 0.99
SSBP4-207ENST00000600244 ERVK-21P61565 698 aa21.24■□□□□ 0.99
SSBP4-207ENST00000600244 TMEM63BQ5T3F8 832 aa21.24■□□□□ 0.99
SSBP4-207ENST00000600244 PRSS33Q8NF86 280 aa21.24■□□□□ 0.99
SSBP4-207ENST00000600244 CCDC8Q9H0W5 538 aaPredicted RBP21.24■□□□□ 0.99
SSBP4-207ENST00000600244 CFAP54Q96N23 3096 aa21.24■□□□□ 0.99
SSBP4-207ENST00000600244 MYH8P13535 1937 aa21.23■□□□□ 0.99
SSBP4-207ENST00000600244 PTPRSQ13332 1948 aa21.23■□□□□ 0.99
SSBP4-207ENST00000600244 ZP2Q05996 745 aa21.23■□□□□ 0.99
SSBP4-207ENST00000600244 IQSEC1Q6DN90 963 aa21.23■□□□□ 0.99
SSBP4-207ENST00000600244 EAF2Q96CJ1 260 aaPredicted RBP21.23■□□□□ 0.99
SSBP4-207ENST00000600244 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.23■□□□□ 0.99
SSBP4-207ENST00000600244 FTOQ9C0B1 505 aaKnown RBP eCLIP21.23■□□□□ 0.99
SSBP4-207ENST00000600244 RAVER2Q9HCJ3 691 aaKnown RBP21.23■□□□□ 0.99
SSBP4-207ENST00000600244 PDGFCQ9NRA1 345 aa21.23■□□□□ 0.99
SSBP4-207ENST00000600244 ZBED9Q6R2W3 1325 aa21.23■□□□□ 0.99
SSBP4-207ENST00000600244 SOWAHBA6NEL2 793 aa21.22■□□□□ 0.99
SSBP4-207ENST00000600244 PITPNM1O00562 1244 aa21.22■□□□□ 0.99
SSBP4-207ENST00000600244 RAD21O60216 631 aa21.22■□□□□ 0.99
SSBP4-207ENST00000600244 ZBED4O75132 1171 aa21.22■□□□□ 0.99
SSBP4-207ENST00000600244 TAPT1Q6NXT6 567 aa21.22■□□□□ 0.99
SSBP4-207ENST00000600244 LCORLQ8N3X6 602 aa21.22■□□□□ 0.99
SSBP4-207ENST00000600244 SLC38A10Q9HBR0 1119 aa21.22■□□□□ 0.99
SSBP4-207ENST00000600244 PRKAG3Q9UGI9 489 aa21.22■□□□□ 0.99
SSBP4-207ENST00000600244 PDE6AP16499 860 aa21.21■□□□□ 0.99
SSBP4-207ENST00000600244 OS9Q13438 667 aaPredicted RBP21.21■□□□□ 0.99
SSBP4-207ENST00000600244 C12orf60Q5U649 245 aa21.21■□□□□ 0.99
SSBP4-207ENST00000600244 TMCO2Q7Z6W1 182 aaPredicted RBP21.21■□□□□ 0.99
SSBP4-207ENST00000600244 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.21■□□□□ 0.99
SSBP4-207ENST00000600244 ARHGAP45Q92619 1136 aa21.21■□□□□ 0.99
SSBP4-207ENST00000600244 TGS1Q96RS0 853 aaKnown RBP21.21■□□□□ 0.99
SSBP4-207ENST00000600244 ASB14A6NK59 587 aa21.2■□□□□ 0.98
SSBP4-207ENST00000600244 F5H6K3 240 aa21.2■□□□□ 0.98
SSBP4-207ENST00000600244 WDR5P61964 334 aaKnown RBP21.2■□□□□ 0.98
SSBP4-207ENST00000600244 KLRC3Q07444 240 aa21.2■□□□□ 0.98
SSBP4-207ENST00000600244 SLC9C2Q5TAH2 1124 aa21.2■□□□□ 0.98
SSBP4-207ENST00000600244 C16orf86Q6ZW13 317 aa21.2■□□□□ 0.98
SSBP4-207ENST00000600244 TRMT2AQ8IZ69 625 aaKnown RBP21.2■□□□□ 0.98
SSBP4-207ENST00000600244 RETREG2Q8NC44 543 aa21.2■□□□□ 0.98
SSBP4-207ENST00000600244 SSH3Q8TE77 659 aa21.2■□□□□ 0.98
SSBP4-207ENST00000600244 MTUS1Q9ULD2 1270 aa21.2■□□□□ 0.98
SSBP4-207ENST00000600244 TRIOO75962 3097 aa21.19■□□□□ 0.98
SSBP4-207ENST00000600244 CYP2D7A0A087X1C5 515 aa21.19■□□□□ 0.98
SSBP4-207ENST00000600244 TCRBV5S4A2TA0A5A2 114 aa21.19■□□□□ 0.98
SSBP4-207ENST00000600244 H3BQ06 376 aaPredicted RBP21.19■□□□□ 0.98
SSBP4-207ENST00000600244 SURF6O75683 361 aaKnown RBP21.19■□□□□ 0.98
SSBP4-207ENST00000600244 KCNJ6P48051 423 aa21.19■□□□□ 0.98
SSBP4-207ENST00000600244 OAZ1P54368 228 aa21.19■□□□□ 0.98
SSBP4-207ENST00000600244 PTPN5P54829 565 aa21.19■□□□□ 0.98
SSBP4-207ENST00000600244 PURAQ00577 322 aaKnown RBP21.19■□□□□ 0.98
SSBP4-207ENST00000600244 IER5LQ5T953 404 aa21.19■□□□□ 0.98
SSBP4-207ENST00000600244 TECTAO75443 2155 aa21.19■□□□□ 0.98
SSBP4-207ENST00000600244 LINC01553A4QN01 128 aa21.18■□□□□ 0.98
SSBP4-207ENST00000600244 PRKAB2O43741 272 aa21.18■□□□□ 0.98
SSBP4-207ENST00000600244 NDUFB10O96000 172 aa21.18■□□□□ 0.98
SSBP4-207ENST00000600244 CT47B1P0C2W7 299 aaPredicted RBP21.18■□□□□ 0.98
SSBP4-207ENST00000600244 IRS1P35568 1242 aa21.18■□□□□ 0.98
SSBP4-207ENST00000600244 GPNMBQ14956 572 aa21.18■□□□□ 0.98
SSBP4-207ENST00000600244 BMP8AQ7Z5Y6 402 aa21.18■□□□□ 0.98
SSBP4-207ENST00000600244 ADHFE1Q8IWW8 467 aa21.18■□□□□ 0.98
SSBP4-207ENST00000600244 RAD9AQ99638 391 aa21.18■□□□□ 0.98
SSBP4-207ENST00000600244 ZBED2Q9BTP6 218 aa21.18■□□□□ 0.98
SSBP4-207ENST00000600244 UPF3BQ9BZI7 483 aaKnown RBP21.18■□□□□ 0.98
SSBP4-207ENST00000600244 ATP8A2Q9NTI2 1148 aa21.18■□□□□ 0.98
SSBP4-207ENST00000600244 POLR3EQ9NVU0 708 aa21.18■□□□□ 0.98
SSBP4-207ENST00000600244 NOP58Q9Y2X3 529 aaKnown RBP21.18■□□□□ 0.98
SSBP4-207ENST00000600244 DDX49Q9Y6V7 483 aaKnown RBP21.18■□□□□ 0.98
SSBP4-207ENST00000600244 ZNF532Q9HCE3 1301 aa21.18■□□□□ 0.98
SSBP4-207ENST00000600244 SPTBN4Q9H254 2564 aa21.18■□□□□ 0.98
SSBP4-207ENST00000600244 GJB5O95377 273 aa21.17■□□□□ 0.98
SSBP4-207ENST00000600244 DEFB103AP81534 67 aa21.17■□□□□ 0.98
SSBP4-207ENST00000600244 COL19A1Q14993 1142 aa21.17■□□□□ 0.98
SSBP4-207ENST00000600244 A1CFQ9NQ94 594 aaKnown RBP21.17■□□□□ 0.98
SSBP4-207ENST00000600244 CTDP1Q9Y5B0 961 aaPredicted RBP21.17■□□□□ 0.98
SSBP4-207ENST00000600244 ZFHX2Q9C0A1 2572 aaPredicted RBP21.17■□□□□ 0.98
SSBP4-207ENST00000600244 TANC1Q9C0D5 1861 aa21.16■□□□□ 0.98
SSBP4-207ENST00000600244 USP17L12C9JPN9 530 aa21.16■□□□□ 0.98
SSBP4-207ENST00000600244 USP17L21D6R901 530 aa21.16■□□□□ 0.98
SSBP4-207ENST00000600244 ATP8B2P98198 1209 aa21.16■□□□□ 0.98
SSBP4-207ENST00000600244 TCF15Q12870 199 aa21.16■□□□□ 0.98
SSBP4-207ENST00000600244 NBPF20Q3BBV1 942 aa21.16■□□□□ 0.98
SSBP4-207ENST00000600244 HERC4Q5GLZ8 1057 aaPredicted RBP21.16■□□□□ 0.98
SSBP4-207ENST00000600244 KIFC2Q96AC6 838 aa21.16■□□□□ 0.98
SSBP4-207ENST00000600244 ARMT1Q9H993 441 aa21.16■□□□□ 0.98
SSBP4-207ENST00000600244 NYAP2Q9P242 653 aa21.16■□□□□ 0.98
SSBP4-207ENST00000600244 BFSP2Q13515 415 aa21.15■□□□□ 0.98
SSBP4-207ENST00000600244 TTF1Q15361 905 aaPredicted RBP21.15■□□□□ 0.98
SSBP4-207ENST00000600244 LRRFIP1Q32MZ4 808 aaKnown RBP21.15■□□□□ 0.98
SSBP4-207ENST00000600244 DUSP28Q4G0W2 176 aa21.15■□□□□ 0.98
SSBP4-207ENST00000600244 EEPD1Q7L9B9 569 aa21.15■□□□□ 0.98
SSBP4-207ENST00000600244 FBXO16Q8IX29 292 aaPredicted RBP21.15■□□□□ 0.98
SSBP4-207ENST00000600244 MRPL38Q96DV4 380 aaKnown RBP21.15■□□□□ 0.98
SSBP4-207ENST00000600244 MTG1Q9BT17 334 aaPredicted RBP21.15■□□□□ 0.98
SSBP4-207ENST00000600244 ACAD9Q9H845 621 aa21.15■□□□□ 0.98
SSBP4-207ENST00000600244 HOMER2Q9NSB8 354 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms