RNA–Protein interactions for RNA: ENST00000599460.5

SYMPK-213, Transcript of symplekin, humanhuman

TSL 1 (best) BASIC

Gene SYMPK, Length 5,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-213ENST00000599460 ATP6V0A2Q9Y487 856 aa16.37■□□□□ 0.21
SYMPK-213ENST00000599460 KIAA0754O94854 1291 aa16.37■□□□□ 0.21
SYMPK-213ENST00000599460 GCFC2P16383 781 aaKnown RBP16.37■□□□□ 0.21
SYMPK-213ENST00000599460 ZRSR2Q15696 482 aaKnown RBP16.37■□□□□ 0.21
SYMPK-213ENST00000599460 MAATS1Q7Z4T9 603 aa16.37■□□□□ 0.21
SYMPK-213ENST00000599460 LY9Q9HBG7 655 aa16.37■□□□□ 0.21
SYMPK-213ENST00000599460 M0QZ92 97 aa16.37■□□□□ 0.21
SYMPK-213ENST00000599460 DCAF4Q8WV16 495 aa16.36■□□□□ 0.21
SYMPK-213ENST00000599460 AK8Q96MA6 479 aa16.36■□□□□ 0.21
SYMPK-213ENST00000599460 PCDHB6Q9Y5E3 794 aa16.36■□□□□ 0.21
SYMPK-213ENST00000599460 PNPLA7Q6ZV29 1317 aa16.36■□□□□ 0.21
SYMPK-213ENST00000599460 WDR19Q8NEZ3 1342 aa16.36■□□□□ 0.21
SYMPK-213ENST00000599460 STX10O60499 249 aa16.36■□□□□ 0.21
SYMPK-213ENST00000599460 RFX5P48382 616 aaPredicted RBP16.36■□□□□ 0.21
SYMPK-213ENST00000599460 FAM178BQ8IXR5 827 aa16.36■□□□□ 0.21
SYMPK-213ENST00000599460 SPC25Q9HBM1 224 aa16.36■□□□□ 0.21
SYMPK-213ENST00000599460 RASAL2Q9UJF2 1139 aa16.36■□□□□ 0.21
SYMPK-213ENST00000599460 COL4A3BPQ9Y5P4 624 aa16.36■□□□□ 0.21
SYMPK-213ENST00000599460 SLU7O95391 586 aaKnown RBP16.36■□□□□ 0.21
SYMPK-213ENST00000599460 SLC9C1Q4G0N8 1177 aa16.36■□□□□ 0.21
SYMPK-213ENST00000599460 DPP9Q86TI2 863 aa16.36■□□□□ 0.21
SYMPK-213ENST00000599460 CCDC84Q86UT8 332 aaPredicted RBP16.36■□□□□ 0.21
SYMPK-213ENST00000599460 FAM207AQ9NSI2 230 aaPredicted RBP16.36■□□□□ 0.21
SYMPK-213ENST00000599460 KIF22Q14807 665 aa16.36■□□□□ 0.21
SYMPK-213ENST00000599460 CEP95Q96GE4 821 aa16.36■□□□□ 0.21
SYMPK-213ENST00000599460 RCOR1Q9UKL0 485 aa16.36■□□□□ 0.21
SYMPK-213ENST00000599460 PXDNQ92626 1479 aa16.36■□□□□ 0.21
SYMPK-213ENST00000599460 SEPT2Q15019 361 aa16.36■□□□□ 0.21
SYMPK-213ENST00000599460 TTC16Q8NEE8 873 aa16.36■□□□□ 0.21
SYMPK-213ENST00000599460 LARP4BQ92615 738 aaKnown RBP16.36■□□□□ 0.21
SYMPK-213ENST00000599460 KRT19P08727 400 aa16.35■□□□□ 0.21
SYMPK-213ENST00000599460 ZNF354CQ86Y25 554 aa16.35■□□□□ 0.21
SYMPK-213ENST00000599460 SUGCTQ9HAC7 445 aa16.35■□□□□ 0.21
SYMPK-213ENST00000599460 MAGEF1Q9HAY2 307 aa16.35■□□□□ 0.21
SYMPK-213ENST00000599460 KDM6AO15550 1401 aaPredicted RBP16.35■□□□□ 0.21
SYMPK-213ENST00000599460 TNNI1P19237 187 aa16.35■□□□□ 0.21
SYMPK-213ENST00000599460 HOXA13P31271 388 aaPredicted RBP16.35■□□□□ 0.21
SYMPK-213ENST00000599460 UBN2Q6ZU65 1347 aa16.35■□□□□ 0.21
SYMPK-213ENST00000599460 MKRN3Q13064 507 aaKnown RBP16.35■□□□□ 0.21
SYMPK-213ENST00000599460 SPECC1LQ69YQ0 1117 aa16.35■□□□□ 0.21
SYMPK-213ENST00000599460 SEPT14Q6ZU15 432 aa16.35■□□□□ 0.21
SYMPK-213ENST00000599460 GSTA5Q7RTV2 222 aa16.35■□□□□ 0.21
SYMPK-213ENST00000599460 PPP1R9BQ96SB3 815 aa16.35■□□□□ 0.21
SYMPK-213ENST00000599460 GJB4Q9NTQ9 266 aa16.35■□□□□ 0.21
SYMPK-213ENST00000599460 CNGA1P29973 690 aa16.35■□□□□ 0.21
SYMPK-213ENST00000599460 R3HDM1Q15032 1099 aaKnown RBP16.35■□□□□ 0.21
SYMPK-213ENST00000599460 FAM26FQ5R3K3 315 aa16.35■□□□□ 0.21
SYMPK-213ENST00000599460 SH3GLB2Q9NR46 395 aa16.35■□□□□ 0.21
SYMPK-213ENST00000599460 XRCC5P13010 732 aaKnown RBP16.34■□□□□ 0.21
SYMPK-213ENST00000599460 PLCB3Q01970 1234 aa16.34■□□□□ 0.21
SYMPK-213ENST00000599460 CPVLQ9H3G5 476 aa16.34■□□□□ 0.21
SYMPK-213ENST00000599460 CUEDC2Q9H467 287 aa16.34■□□□□ 0.21
SYMPK-213ENST00000599460 NRBP2Q9NSY0 501 aa16.34■□□□□ 0.21
SYMPK-213ENST00000599460 PCDHA5Q9Y5H7 936 aa16.34■□□□□ 0.21
SYMPK-213ENST00000599460 POLGP54098 1239 aaPredicted RBP16.34■□□□□ 0.21
SYMPK-213ENST00000599460 TMTC1Q8IUR5 882 aa16.34■□□□□ 0.21
SYMPK-213ENST00000599460 GOLGA1Q92805 767 aa16.34■□□□□ 0.21
SYMPK-213ENST00000599460 RNF181Q9P0P0 153 aa16.34■□□□□ 0.21
SYMPK-213ENST00000599460 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.34■□□□□ 0.219e-6■■□□□ 14.3
SYMPK-213ENST00000599460 V9GYY5 206 aaPredicted RBP16.34■□□□□ 0.21
SYMPK-213ENST00000599460 FAM83BQ5T0W9 1011 aa16.34■□□□□ 0.21
SYMPK-213ENST00000599460 FAM160B1Q5W0V3 765 aa16.34■□□□□ 0.21
SYMPK-213ENST00000599460 LARSQ9P2J5 1176 aaKnown RBP16.34■□□□□ 0.21
SYMPK-213ENST00000599460 ADD3Q9UEY8 706 aaKnown RBP16.34■□□□□ 0.21
SYMPK-213ENST00000599460 POLR3GO15318 223 aaPredicted RBP16.34■□□□□ 0.21
SYMPK-213ENST00000599460 BCRP11274 1271 aa16.34■□□□□ 0.21
SYMPK-213ENST00000599460 CCND2P30279 289 aa16.34■□□□□ 0.21
SYMPK-213ENST00000599460 LIG4P49917 911 aa16.34■□□□□ 0.21
SYMPK-213ENST00000599460 ZBTB8OSQ8IWT0 167 aa16.34■□□□□ 0.21
SYMPK-213ENST00000599460 JAKMIP2Q96AA8 810 aa16.34■□□□□ 0.21
SYMPK-213ENST00000599460 FANCLQ9NW38 375 aa16.34■□□□□ 0.21
SYMPK-213ENST00000599460 SUGT1Q9Y2Z0 365 aa16.34■□□□□ 0.21
SYMPK-213ENST00000599460 CDC25AP30304 524 aa16.33■□□□□ 0.21
SYMPK-213ENST00000599460 FAM47CQ5HY64 1035 aa16.33■□□□□ 0.21
SYMPK-213ENST00000599460 ZNF512BQ96KM6 892 aaPredicted RBP16.33■□□□□ 0.21
SYMPK-213ENST00000599460 COL5A2P05997 1499 aaPredicted RBP16.33■□□□□ 0.21
SYMPK-213ENST00000599460 LRMPQ12912 555 aa16.33■□□□□ 0.21
SYMPK-213ENST00000599460 DMP1Q13316 513 aaPredicted RBP16.33■□□□□ 0.21
SYMPK-213ENST00000599460 SFMBT2Q5VUG0 894 aa16.33■□□□□ 0.21
SYMPK-213ENST00000599460 DYNC1I1O14576 645 aa16.33■□□□□ 0.2
SYMPK-213ENST00000599460 CHGBP05060 677 aa16.33■□□□□ 0.2
SYMPK-213ENST00000599460 NLRC4Q9NPP4 1024 aa16.33■□□□□ 0.2
SYMPK-213ENST00000599460 ZNF609O15014 1411 aa16.33■□□□□ 0.2
SYMPK-213ENST00000599460 KLHL30Q0D2K2 578 aa16.33■□□□□ 0.2
SYMPK-213ENST00000599460 EZH2Q15910 746 aaKnown RBP16.33■□□□□ 0.2
SYMPK-213ENST00000599460 RRAGAQ7L523 313 aa16.33■□□□□ 0.2
SYMPK-213ENST00000599460 SLC10A4Q96EP9 437 aa16.33■□□□□ 0.2
SYMPK-213ENST00000599460 TIGD1Q96MW7 591 aa16.33■□□□□ 0.2
SYMPK-213ENST00000599460 WRNIP1Q96S55 665 aa16.33■□□□□ 0.2
SYMPK-213ENST00000599460 LSM14BQ9BX40 385 aaKnown RBP16.33■□□□□ 0.2
SYMPK-213ENST00000599460 ARHGAP44Q17R89 818 aa16.32■□□□□ 0.2
SYMPK-213ENST00000599460 GOLGA5Q8TBA6 731 aa16.32■□□□□ 0.2
SYMPK-213ENST00000599460 GSDMAQ96QA5 445 aa16.32■□□□□ 0.2
SYMPK-213ENST00000599460 WDR11Q9BZH6 1224 aa16.32■□□□□ 0.2
SYMPK-213ENST00000599460 SRPRBQ9Y5M8 271 aaKnown RBP16.32■□□□□ 0.2
SYMPK-213ENST00000599460 PFKFB3Q16875 520 aaPredicted RBP16.32■□□□□ 0.2
SYMPK-213ENST00000599460 SEPT9Q9UHD8 586 aaPredicted RBP16.32■□□□□ 0.2
SYMPK-213ENST00000599460 ZBTB5O15062 677 aa16.32■□□□□ 0.2
SYMPK-213ENST00000599460 ADKP55263 362 aaKnown RBP16.32■□□□□ 0.2
SYMPK-213ENST00000599460 IGBP1P78318 339 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms