RNA–Protein interactions for RNA: ENST00000599138.5

VRK3-215, Transcript of vaccinia related kinase 3, humanhuman

TSL 4

Gene VRK3, Length 503 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-215ENST00000599138 ARMCX2Q7L311 632 aa11.33□□□□□ -0.6
VRK3-215ENST00000599138 CHST3Q7LGC8 479 aa11.33□□□□□ -0.6
VRK3-215ENST00000599138 STAG2Q8N3U4 1231 aa11.33□□□□□ -0.6
VRK3-215ENST00000599138 MTMR8Q96EF0 704 aa11.33□□□□□ -0.6
VRK3-215ENST00000599138 KATNBL1Q9H079 304 aa11.33□□□□□ -0.6
VRK3-215ENST00000599138 C11orf49Q9H6J7 331 aa11.33□□□□□ -0.6
VRK3-215ENST00000599138 JMJD4Q9H9V9 463 aa11.33□□□□□ -0.6
VRK3-215ENST00000599138 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.33□□□□□ -0.6
VRK3-215ENST00000599138 CNPY2Q9Y2B0 182 aa11.33□□□□□ -0.6
VRK3-215ENST00000599138 DNAH12Q6ZR08 3092 aa11.32□□□□□ -0.6
VRK3-215ENST00000599138 ERICH2A1L162 156 aa11.32□□□□□ -0.6
VRK3-215ENST00000599138 KLRF2D3W0D1 207 aa11.32□□□□□ -0.6
VRK3-215ENST00000599138 DNM1LO00429 736 aa11.32□□□□□ -0.6
VRK3-215ENST00000599138 AKR1A1P14550 325 aa11.32□□□□□ -0.6
VRK3-215ENST00000599138 MCM5P33992 734 aa11.32□□□□□ -0.6
VRK3-215ENST00000599138 ACVR2BQ13705 512 aa11.32□□□□□ -0.6
VRK3-215ENST00000599138 BAATQ14032 418 aaPredicted RBP11.32□□□□□ -0.6
VRK3-215ENST00000599138 CDC37Q16543 378 aaPredicted RBP11.32□□□□□ -0.6
VRK3-215ENST00000599138 TMEM67Q5HYA8 995 aa11.32□□□□□ -0.6
VRK3-215ENST00000599138 NSMFQ6X4W1 530 aa11.32□□□□□ -0.6
VRK3-215ENST00000599138 CCDC144CPQ8IYA2 1237 aa11.32□□□□□ -0.6
VRK3-215ENST00000599138 ARRDC4Q8NCT1 418 aa11.32□□□□□ -0.6
VRK3-215ENST00000599138 RGS22Q8NE09 1264 aa11.32□□□□□ -0.6
VRK3-215ENST00000599138 MORC4Q8TE76 937 aa11.32□□□□□ -0.6
VRK3-215ENST00000599138 DPF3Q92784 378 aa11.32□□□□□ -0.6
VRK3-215ENST00000599138 KCNB2Q92953 911 aa11.32□□□□□ -0.6
VRK3-215ENST00000599138 MAF1Q9H063 256 aa11.32□□□□□ -0.6
VRK3-215ENST00000599138 ABHD16BQ9H3Z7 469 aa11.32□□□□□ -0.6
VRK3-215ENST00000599138 LY9Q9HBG7 655 aa11.32□□□□□ -0.6
VRK3-215ENST00000599138 GPHNQ9NQX3 736 aaPredicted RBP11.32□□□□□ -0.6
VRK3-215ENST00000599138 LOC102724159A0A0B4J2E5 919 aa11.31□□□□□ -0.6
VRK3-215ENST00000599138 ASB14A6NK59 587 aa11.31□□□□□ -0.6
VRK3-215ENST00000599138 H0YGN5 161 aa11.31□□□□□ -0.6
VRK3-215ENST00000599138 SH2B2O14492 632 aaPredicted RBP11.31□□□□□ -0.6
VRK3-215ENST00000599138 PRC1O43663 620 aa11.31□□□□□ -0.6
VRK3-215ENST00000599138 RARBP10826 455 aa11.31□□□□□ -0.6
VRK3-215ENST00000599138 PWP2Q15269 919 aaKnown RBP11.31□□□□□ -0.6
VRK3-215ENST00000599138 LRRC41Q15345 812 aa11.31□□□□□ -0.6
VRK3-215ENST00000599138 QRICH1Q2TAL8 776 aa11.31□□□□□ -0.6
VRK3-215ENST00000599138 RNF20Q5VTR2 975 aa11.31□□□□□ -0.6
VRK3-215ENST00000599138 ANO1Q5XXA6 986 aa11.31□□□□□ -0.6
VRK3-215ENST00000599138 RASEFQ8IZ41 740 aa11.31□□□□□ -0.6
VRK3-215ENST00000599138 TMEM87BQ96K49 555 aa11.31□□□□□ -0.6
VRK3-215ENST00000599138 MAP3K14Q99558 947 aa11.31□□□□□ -0.6
VRK3-215ENST00000599138 RIOX1Q9H6W3 641 aa11.31□□□□□ -0.6
VRK3-215ENST00000599138 FAM184BQ9ULE4 1060 aa11.31□□□□□ -0.6
VRK3-215ENST00000599138 LRRC37A2A6NM11 1700 aa11.3□□□□□ -0.6
VRK3-215ENST00000599138 ADCY6O43306 1168 aa11.3□□□□□ -0.6
VRK3-215ENST00000599138 ADAMTS4O75173 837 aa11.3□□□□□ -0.6
VRK3-215ENST00000599138 DDAH1O94760 285 aa11.3□□□□□ -0.6
VRK3-215ENST00000599138 LIFRP42702 1097 aa11.3□□□□□ -0.6
VRK3-215ENST00000599138 RPS6P62753 249 aaKnown RBP11.3□□□□□ -0.6
VRK3-215ENST00000599138 EXOSC10Q01780 885 aaKnown RBP11.3□□□□□ -0.6
VRK3-215ENST00000599138 GJC2Q5T442 439 aaPredicted RBP11.3□□□□□ -0.6
VRK3-215ENST00000599138 SLC30A10Q6XR72 485 aa11.3□□□□□ -0.6
VRK3-215ENST00000599138 RNF207Q6ZRF8 634 aa11.3□□□□□ -0.6
VRK3-215ENST00000599138 CATIPQ7Z7H3 387 aa11.3□□□□□ -0.6
VRK3-215ENST00000599138 TMTC2Q8N394 836 aa11.3□□□□□ -0.6
VRK3-215ENST00000599138 PURBQ96QR8 312 aaKnown RBP11.3□□□□□ -0.6
VRK3-215ENST00000599138 VAT1LQ9HCJ6 419 aa11.3□□□□□ -0.6
VRK3-215ENST00000599138 XPNPEP3Q9NQH7 507 aa11.3□□□□□ -0.6
VRK3-215ENST00000599138 ZHX1Q9UKY1 873 aaPredicted RBP11.3□□□□□ -0.6
VRK3-215ENST00000599138 NR2E3Q9Y5X4 410 aa11.3□□□□□ -0.6
VRK3-215ENST00000599138 ABCB11O95342 1321 aa11.3□□□□□ -0.6
VRK3-215ENST00000599138 PTPDC1A2A3K4 754 aa11.29□□□□□ -0.6
VRK3-215ENST00000599138 ZBTB5O15062 677 aa11.29□□□□□ -0.6
VRK3-215ENST00000599138 CYTH3O43739 400 aa11.29□□□□□ -0.6
VRK3-215ENST00000599138 EVI5O60447 810 aa11.29□□□□□ -0.6
VRK3-215ENST00000599138 PPP1R11O60927 126 aaPredicted RBP11.29□□□□□ -0.6
VRK3-215ENST00000599138 DUSP11O75319 330 aaKnown RBP11.29□□□□□ -0.6
VRK3-215ENST00000599138 EDNRBP24530 442 aa11.29□□□□□ -0.6
VRK3-215ENST00000599138 ALDH5A1P51649 535 aaPredicted RBP11.29□□□□□ -0.6
VRK3-215ENST00000599138 NKX3-2P78367 333 aa11.29□□□□□ -0.6
VRK3-215ENST00000599138 GHRHRQ02643 423 aa11.29□□□□□ -0.6
VRK3-215ENST00000599138 CCDC144BQ3MJ40 725 aa11.29□□□□□ -0.6
VRK3-215ENST00000599138 USH1GQ495M9 461 aa11.29□□□□□ -0.6
VRK3-215ENST00000599138 SGMS1Q86VZ5 419 aa11.29□□□□□ -0.6
VRK3-215ENST00000599138 FBXO11Q86XK2 927 aa11.29□□□□□ -0.6
VRK3-215ENST00000599138 ZNF654Q8IZM8 581 aa11.29□□□□□ -0.6
VRK3-215ENST00000599138 KLHDC9Q8NEP7 349 aa11.29□□□□□ -0.6
VRK3-215ENST00000599138 LENG1Q96BZ8 264 aaPredicted RBP11.29□□□□□ -0.6
VRK3-215ENST00000599138 UPF3AQ9H1J1 476 aaKnown RBP11.29□□□□□ -0.6
VRK3-215ENST00000599138 ADD3Q9UEY8 706 aaKnown RBP11.29□□□□□ -0.6
VRK3-215ENST00000599138 PHF24Q9UPV7 400 aa11.29□□□□□ -0.6
VRK3-215ENST00000599138 DDX49Q9Y6V7 483 aaKnown RBP11.29□□□□□ -0.6
VRK3-215ENST00000599138 KBTBD13C9JR72 458 aa11.28□□□□□ -0.6
VRK3-215ENST00000599138 OPLAHO14841 1288 aa11.28□□□□□ -0.6
VRK3-215ENST00000599138 EPB41L2O43491 1005 aaKnown RBP11.28□□□□□ -0.6
VRK3-215ENST00000599138 DHX16O60231 1041 aaKnown RBP11.28□□□□□ -0.6
VRK3-215ENST00000599138 PGK1P00558 417 aa11.28□□□□□ -0.6
VRK3-215ENST00000599138 CALML3P27482 149 aa11.28□□□□□ -0.6
VRK3-215ENST00000599138 CST5P28325 142 aaPredicted RBP11.28□□□□□ -0.6
VRK3-215ENST00000599138 SMARCA1P28370 1054 aa11.28□□□□□ -0.6
VRK3-215ENST00000599138 HSPA4P34932 840 aa11.28□□□□□ -0.6
VRK3-215ENST00000599138 KRT32Q14532 448 aa11.28□□□□□ -0.6
VRK3-215ENST00000599138 SNX17Q15036 470 aa11.28□□□□□ -0.6
VRK3-215ENST00000599138 LRRC26Q2I0M4 334 aa11.28□□□□□ -0.6
VRK3-215ENST00000599138 ADCK5Q3MIX3 580 aa11.28□□□□□ -0.6
VRK3-215ENST00000599138 CCSAPQ6IQ19 270 aaPredicted RBP11.28□□□□□ -0.6
VRK3-215ENST00000599138 TAPT1Q6NXT6 567 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms