RNA–Protein interactions for RNA: ENST00000598422.1

XRCC1-208, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 2

Gene XRCC1, Length 701 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-208ENST00000598422 IFIT3O14879 490 aaKnown RBP17.08■□□□□ 0.32
XRCC1-208ENST00000598422 SLC34A2O95436 690 aa17.08■□□□□ 0.32
XRCC1-208ENST00000598422 ADCYAP1R1P41586 468 aa17.08■□□□□ 0.32
XRCC1-208ENST00000598422 RTP1P59025 263 aa17.08■□□□□ 0.32
XRCC1-208ENST00000598422 CCDC144BQ3MJ40 725 aa17.08■□□□□ 0.32
XRCC1-208ENST00000598422 USH1GQ495M9 461 aa17.08■□□□□ 0.32
XRCC1-208ENST00000598422 CASC1Q6TDU7 716 aa17.08■□□□□ 0.32
XRCC1-208ENST00000598422 FERMT2Q96AC1 680 aa17.08■□□□□ 0.32
XRCC1-208ENST00000598422 CPVLQ9H3G5 476 aa17.08■□□□□ 0.32
XRCC1-208ENST00000598422 ATP11BQ9Y2G3 1177 aa17.08■□□□□ 0.32
XRCC1-208ENST00000598422 E7EWF7 191 aa17.07■□□□□ 0.32
XRCC1-208ENST00000598422 DUSP11O75319 330 aaKnown RBP17.07■□□□□ 0.32
XRCC1-208ENST00000598422 CALML3P27482 149 aa17.07■□□□□ 0.32
XRCC1-208ENST00000598422 BAATQ14032 418 aaPredicted RBP17.07■□□□□ 0.32
XRCC1-208ENST00000598422 RNF207Q6ZRF8 634 aa17.07■□□□□ 0.32
XRCC1-208ENST00000598422 SKAP1Q86WV1 359 aa17.07■□□□□ 0.32
XRCC1-208ENST00000598422 MAP4K1Q92918 833 aa17.07■□□□□ 0.32
XRCC1-208ENST00000598422 MPHOSPH6Q99547 160 aaKnown RBP17.07■□□□□ 0.32
XRCC1-208ENST00000598422 ESYT1Q9BSJ8 1104 aa17.07■□□□□ 0.32
XRCC1-208ENST00000598422 ANO2Q9NQ90 1003 aa17.07■□□□□ 0.32
XRCC1-208ENST00000598422 PHF24Q9UPV7 400 aa17.07■□□□□ 0.32
XRCC1-208ENST00000598422 C6orf222P0C671 652 aaPredicted RBP17.06■□□□□ 0.32
XRCC1-208ENST00000598422 WTAPQ15007 396 aa17.06■□□□□ 0.32
XRCC1-208ENST00000598422 SEC23AQ15436 765 aa17.06■□□□□ 0.32
XRCC1-208ENST00000598422 SLC30A10Q6XR72 485 aa17.06■□□□□ 0.32
XRCC1-208ENST00000598422 ADGRF4Q8IZF3 695 aa17.06■□□□□ 0.32
XRCC1-208ENST00000598422 CLEC4DQ8WXI8 215 aa17.06■□□□□ 0.32
XRCC1-208ENST00000598422 CEP290O15078 2479 aa17.06■□□□□ 0.32
XRCC1-208ENST00000598422 ABCB11O95342 1321 aa17.05■□□□□ 0.32
XRCC1-208ENST00000598422 A0A1W2PQ45 241 aaPredicted RBP17.05■□□□□ 0.32
XRCC1-208ENST00000598422 A0A1W2PQY0 241 aa17.05■□□□□ 0.32
XRCC1-208ENST00000598422 ADAMTS4O75173 837 aa17.05■□□□□ 0.32
XRCC1-208ENST00000598422 MAGEA10P43363 369 aaPredicted RBP17.05■□□□□ 0.32
XRCC1-208ENST00000598422 TNFAIP2Q03169 654 aa17.05■□□□□ 0.32
XRCC1-208ENST00000598422 TRIM60Q495X7 471 aa17.05■□□□□ 0.32
XRCC1-208ENST00000598422 TMEM67Q5HYA8 995 aa17.05■□□□□ 0.32
XRCC1-208ENST00000598422 SLC39A5Q6ZMH5 540 aa17.05■□□□□ 0.32
XRCC1-208ENST00000598422 FBXO16Q8IX29 292 aaPredicted RBP17.05■□□□□ 0.32
XRCC1-208ENST00000598422 NUP133Q8WUM0 1156 aa17.05■□□□□ 0.32
XRCC1-208ENST00000598422 LBHD1Q9BQE6 289 aaPredicted RBP17.05■□□□□ 0.32
XRCC1-208ENST00000598422 TSEN34Q9BSV6 310 aaKnown RBP17.05■□□□□ 0.32
XRCC1-208ENST00000598422 VAT1LQ9HCJ6 419 aa17.05■□□□□ 0.32
XRCC1-208ENST00000598422 PRDM5Q9NQX1 630 aaPredicted RBP17.05■□□□□ 0.32
XRCC1-208ENST00000598422 TAF6LQ9Y6J9 622 aa17.05■□□□□ 0.32
XRCC1-208ENST00000598422 ASTN1O14525 1302 aa17.04■□□□□ 0.32
XRCC1-208ENST00000598422 A0A1W2PPC1 479 aa17.04■□□□□ 0.32
XRCC1-208ENST00000598422 MOXD2PA6NHM9 499 aa17.04■□□□□ 0.32
XRCC1-208ENST00000598422 ALDH5A1P51649 535 aaPredicted RBP17.04■□□□□ 0.32
XRCC1-208ENST00000598422 RPS6P62753 249 aaKnown RBP17.04■□□□□ 0.32
XRCC1-208ENST00000598422 STOX1Q6ZVD7 989 aa17.04■□□□□ 0.32
XRCC1-208ENST00000598422 EEPD1Q7L9B9 569 aa17.04■□□□□ 0.32
XRCC1-208ENST00000598422 CHST3Q7LGC8 479 aa17.04■□□□□ 0.32
XRCC1-208ENST00000598422 CATIPQ7Z7H3 387 aa17.04■□□□□ 0.32
XRCC1-208ENST00000598422 FBXO11Q86XK2 927 aa17.04■□□□□ 0.32
XRCC1-208ENST00000598422 PCSK9Q8NBP7 692 aaKnown RBP17.04■□□□□ 0.32
XRCC1-208ENST00000598422 PURBQ96QR8 312 aaKnown RBP17.04■□□□□ 0.32
XRCC1-208ENST00000598422 GDF15Q99988 308 aa17.04■□□□□ 0.32
XRCC1-208ENST00000598422 KATNBL1Q9H079 304 aa17.04■□□□□ 0.32
XRCC1-208ENST00000598422 LSG1Q9H089 658 aaKnown RBP17.04■□□□□ 0.32
XRCC1-208ENST00000598422 PRO3102Q9H379 93 aa17.04■□□□□ 0.32
XRCC1-208ENST00000598422 VTA1Q9NP79 307 aa17.04■□□□□ 0.32
XRCC1-208ENST00000598422 STARD7Q9NQZ5 370 aa17.04■□□□□ 0.32
XRCC1-208ENST00000598422 DDX49Q9Y6V7 483 aaKnown RBP17.04■□□□□ 0.32
XRCC1-208ENST00000598422 LOC102724159A0A0B4J2E5 919 aa17.03■□□□□ 0.32
XRCC1-208ENST00000598422 B4DLN1 442 aa17.03■□□□□ 0.32
XRCC1-208ENST00000598422 KLRF2D3W0D1 207 aa17.03■□□□□ 0.32
XRCC1-208ENST00000598422 CST5P28325 142 aaPredicted RBP17.03■□□□□ 0.32
XRCC1-208ENST00000598422 FXR1P51114 621 aaKnown RBP eCLIP17.03■□□□□ 0.32
XRCC1-208ENST00000598422 MRPL12P52815 198 aaKnown RBP17.03■□□□□ 0.32
XRCC1-208ENST00000598422 ACLYP53396 1101 aa17.03■□□□□ 0.32
XRCC1-208ENST00000598422 PDE4DQ08499 809 aa17.03■□□□□ 0.32
XRCC1-208ENST00000598422 SNX17Q15036 470 aa17.03■□□□□ 0.32
XRCC1-208ENST00000598422 PWP2Q15269 919 aaKnown RBP17.03■□□□□ 0.32
XRCC1-208ENST00000598422 QRICH1Q2TAL8 776 aa17.03■□□□□ 0.32
XRCC1-208ENST00000598422 TLK2Q86UE8 772 aa17.03■□□□□ 0.32
XRCC1-208ENST00000598422 MCF2L2Q86YR7 1114 aa17.03■□□□□ 0.32
XRCC1-208ENST00000598422 AP5M1Q9H0R1 490 aa17.03■□□□□ 0.32
XRCC1-208ENST00000598422 JMJD4Q9H9V9 463 aa17.03■□□□□ 0.32
XRCC1-208ENST00000598422 MRPL11Q9Y3B7 192 aaKnown RBP17.03■□□□□ 0.32
XRCC1-208ENST00000598422 FRMPD3Q5JV73 1810 aa17.03■□□□□ 0.32
XRCC1-208ENST00000598422 MYADML2A6NDP7 307 aa17.02■□□□□ 0.32
XRCC1-208ENST00000598422 ADCY6O43306 1168 aa17.02■□□□□ 0.32
XRCC1-208ENST00000598422 CDC45O75419 566 aa17.02■□□□□ 0.32
XRCC1-208ENST00000598422 BMP8BP34820 402 aa17.02■□□□□ 0.32
XRCC1-208ENST00000598422 GJA9P57773 515 aa17.02■□□□□ 0.32
XRCC1-208ENST00000598422 MDM2Q00987 491 aaPredicted RBP17.02■□□□□ 0.32
XRCC1-208ENST00000598422 GRM4Q14833 912 aa17.02■□□□□ 0.32
XRCC1-208ENST00000598422 KCNA10Q16322 511 aa17.02■□□□□ 0.32
XRCC1-208ENST00000598422 GNASQ5JWF2 1037 aa17.02■□□□□ 0.32
XRCC1-208ENST00000598422 RNF20Q5VTR2 975 aa17.02■□□□□ 0.32
XRCC1-208ENST00000598422 MB21D2Q8IYB1 491 aaPredicted RBP17.02■□□□□ 0.32
XRCC1-208ENST00000598422 STAG2Q8N3U4 1231 aa17.02■□□□□ 0.32
XRCC1-208ENST00000598422 KLHDC9Q8NEP7 349 aa17.02■□□□□ 0.32
XRCC1-208ENST00000598422 DNERQ8NFT8 737 aa17.02■□□□□ 0.32
XRCC1-208ENST00000598422 VTI1AQ96AJ9 217 aa17.02■□□□□ 0.32
XRCC1-208ENST00000598422 GLT1D1Q96MS3 346 aa17.02■□□□□ 0.32
XRCC1-208ENST00000598422 UBE2OQ9C0C9 1292 aaKnown RBP17.02■□□□□ 0.32
XRCC1-208ENST00000598422 UPF3AQ9H1J1 476 aaKnown RBP17.02■□□□□ 0.32
XRCC1-208ENST00000598422 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.01■□□□□ 0.31
XRCC1-208ENST00000598422 SLC27A2O14975 620 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms