RNA–Protein interactions for RNA: ENST00000598271.5

FKRP-216, Transcript of fukutin related protein, humanhuman

TSL 4

Gene FKRP, Length 592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FKRP-216ENST00000598271 TRIM43BA6NCK2 446 aa11.28□□□□□ -0.6
FKRP-216ENST00000598271 FGAP02671 866 aa11.28□□□□□ -0.6
FKRP-216ENST00000598271 CLTBP09497 229 aa11.28□□□□□ -0.6
FKRP-216ENST00000598271 RAG1P15918 1043 aa11.28□□□□□ -0.6
FKRP-216ENST00000598271 ACLYP53396 1101 aa11.28□□□□□ -0.6
FKRP-216ENST00000598271 BEX3Q00994 111 aa11.28□□□□□ -0.6
FKRP-216ENST00000598271 SHHQ15465 462 aa11.28□□□□□ -0.6
FKRP-216ENST00000598271 KCNA10Q16322 511 aa11.28□□□□□ -0.6
FKRP-216ENST00000598271 CCDC144BQ3MJ40 725 aa11.28□□□□□ -0.6
FKRP-216ENST00000598271 LRIT3Q3SXY7 679 aa11.28□□□□□ -0.6
FKRP-216ENST00000598271 MUM1L1Q5H9M0 696 aa11.28□□□□□ -0.6
FKRP-216ENST00000598271 C9orf50Q5SZB4 431 aa11.28□□□□□ -0.6
FKRP-216ENST00000598271 RCSD1Q6JBY9 416 aa11.28□□□□□ -0.6
FKRP-216ENST00000598271 TRIM43Q96BQ3 446 aaPredicted RBP11.28□□□□□ -0.6
FKRP-216ENST00000598271 GMCL1Q96IK5 515 aa11.28□□□□□ -0.6
FKRP-216ENST00000598271 ZKSCAN3Q9BRR0 538 aa11.28□□□□□ -0.6
FKRP-216ENST00000598271 A1CFQ9NQ94 594 aaKnown RBP11.28□□□□□ -0.6
FKRP-216ENST00000598271 IL17RBQ9NRM6 502 aa11.28□□□□□ -0.6
FKRP-216ENST00000598271 TMEM39AQ9NV64 488 aa11.28□□□□□ -0.6
FKRP-216ENST00000598271 PRR12Q9ULL5 1215 aa11.28□□□□□ -0.6
FKRP-216ENST00000598271 LRRC37A2A6NM11 1700 aa11.28□□□□□ -0.6
FKRP-216ENST00000598271 DNAJC25-GNG10A0A024R161 153 aa11.27□□□□□ -0.61
FKRP-216ENST00000598271 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.27□□□□□ -0.61
FKRP-216ENST00000598271 PTPDC1A2A3K4 754 aa11.27□□□□□ -0.61
FKRP-216ENST00000598271 ATP2A1O14983 1001 aa11.27□□□□□ -0.61
FKRP-216ENST00000598271 ADCY6O43306 1168 aa11.27□□□□□ -0.61
FKRP-216ENST00000598271 ADAMTS4O75173 837 aa11.27□□□□□ -0.61
FKRP-216ENST00000598271 FDX1P10109 184 aa11.27□□□□□ -0.61
FKRP-216ENST00000598271 HSPD1P10809 573 aaKnown RBP11.27□□□□□ -0.61
FKRP-216ENST00000598271 PTGS1P23219 599 aa11.27□□□□□ -0.61
FKRP-216ENST00000598271 HSPA4P34932 840 aa11.27□□□□□ -0.61
FKRP-216ENST00000598271 OAZ1P54368 228 aa11.27□□□□□ -0.61
FKRP-216ENST00000598271 GNASQ5JWF2 1037 aa11.27□□□□□ -0.61
FKRP-216ENST00000598271 SYDE2Q5VT97 1194 aa11.27□□□□□ -0.61
FKRP-216ENST00000598271 MFSD6Q6ZSS7 791 aa11.27□□□□□ -0.61
FKRP-216ENST00000598271 FBXO16Q8IX29 292 aaPredicted RBP11.27□□□□□ -0.61
FKRP-216ENST00000598271 IL27Q8NEV9 243 aa11.27□□□□□ -0.61
FKRP-216ENST00000598271 NUP133Q8WUM0 1156 aa11.27□□□□□ -0.61
FKRP-216ENST00000598271 DCAF4Q8WV16 495 aa11.27□□□□□ -0.61
FKRP-216ENST00000598271 FGD4Q96M96 766 aa11.27□□□□□ -0.61
FKRP-216ENST00000598271 PURBQ96QR8 312 aaKnown RBP11.27□□□□□ -0.61
FKRP-216ENST00000598271 ABHD16BQ9H3Z7 469 aa11.27□□□□□ -0.61
FKRP-216ENST00000598271 SYNPO2Q9UMS6 1093 aa11.27□□□□□ -0.61
FKRP-216ENST00000598271 LAMA4Q16363 1823 aa11.27□□□□□ -0.61
FKRP-216ENST00000598271 LCTP09848 1927 aa11.27□□□□□ -0.61
FKRP-216ENST00000598271 MYH6P13533 1939 aa11.27□□□□□ -0.61
FKRP-216ENST00000598271 SOWAHBA6NEL2 793 aa11.26□□□□□ -0.61
FKRP-216ENST00000598271 DCDC2CA8MYV0 355 aa11.26□□□□□ -0.61
FKRP-216ENST00000598271 ORC4O43929 436 aa11.26□□□□□ -0.61
FKRP-216ENST00000598271 DUSP11O75319 330 aaKnown RBP11.26□□□□□ -0.61
FKRP-216ENST00000598271 ASGR1P07306 291 aa11.26□□□□□ -0.61
FKRP-216ENST00000598271 TOP1P11387 765 aaKnown RBP11.26□□□□□ -0.61
FKRP-216ENST00000598271 CALML3P27482 149 aa11.26□□□□□ -0.61
FKRP-216ENST00000598271 TNFAIP2Q03169 654 aa11.26□□□□□ -0.61
FKRP-216ENST00000598271 ALX1Q15699 326 aa11.26□□□□□ -0.61
FKRP-216ENST00000598271 TKFCQ3LXA3 575 aa11.26□□□□□ -0.61
FKRP-216ENST00000598271 ZNF697Q5TEC3 545 aa11.26□□□□□ -0.61
FKRP-216ENST00000598271 MAMDC4Q6UXC1 1216 aa11.26□□□□□ -0.61
FKRP-216ENST00000598271 TBC1D10CQ8IV04 446 aa11.26□□□□□ -0.61
FKRP-216ENST00000598271 HSCBQ8IWL3 235 aa11.26□□□□□ -0.61
FKRP-216ENST00000598271 MSL3Q8N5Y2 521 aaKnown RBP11.26□□□□□ -0.61
FKRP-216ENST00000598271 RNPC3Q96LT9 517 aaKnown RBP11.26□□□□□ -0.61
FKRP-216ENST00000598271 GLT1D1Q96MS3 346 aa11.26□□□□□ -0.61
FKRP-216ENST00000598271 TMEM47Q9BQJ4 181 aa11.26□□□□□ -0.61
FKRP-216ENST00000598271 PPP1R12CQ9BZL4 782 aa11.26□□□□□ -0.61
FKRP-216ENST00000598271 AP5M1Q9H0R1 490 aa11.26□□□□□ -0.61
FKRP-216ENST00000598271 ANAPC4Q9UJX5 808 aa11.26□□□□□ -0.61
FKRP-216ENST00000598271 ZNF536O15090 1300 aa11.26□□□□□ -0.61
FKRP-216ENST00000598271 NEDD4P46934 1319 aa11.26□□□□□ -0.61
FKRP-216ENST00000598271 MOXD2PA6NHM9 499 aa11.25□□□□□ -0.61
FKRP-216ENST00000598271 ASB14A6NK59 587 aa11.25□□□□□ -0.61
FKRP-216ENST00000598271 DHX16O60231 1041 aaKnown RBP11.25□□□□□ -0.61
FKRP-216ENST00000598271 GOLGA8HP0CJ92 632 aa11.25□□□□□ -0.61
FKRP-216ENST00000598271 PTH1RQ03431 593 aa11.25□□□□□ -0.61
FKRP-216ENST00000598271 SNX17Q15036 470 aa11.25□□□□□ -0.61
FKRP-216ENST00000598271 USH1GQ495M9 461 aa11.25□□□□□ -0.61
FKRP-216ENST00000598271 AKNAD1Q5T1N1 836 aa11.25□□□□□ -0.61
FKRP-216ENST00000598271 ZNF467Q7Z7K2 595 aaPredicted RBP11.25□□□□□ -0.61
FKRP-216ENST00000598271 TLK2Q86UE8 772 aa11.25□□□□□ -0.61
FKRP-216ENST00000598271 PCSK9Q8NBP7 692 aaKnown RBP11.25□□□□□ -0.61
FKRP-216ENST00000598271 MAP4K1Q92918 833 aa11.25□□□□□ -0.61
FKRP-216ENST00000598271 KCNB2Q92953 911 aa11.25□□□□□ -0.61
FKRP-216ENST00000598271 TSEN34Q9BSV6 310 aaKnown RBP11.25□□□□□ -0.61
FKRP-216ENST00000598271 MTMR10Q9NXD2 777 aa11.25□□□□□ -0.61
FKRP-216ENST00000598271 A0A0U1RQG5 324 aaPredicted RBP11.24□□□□□ -0.61
FKRP-216ENST00000598271 NFIBO00712 420 aa11.24□□□□□ -0.61
FKRP-216ENST00000598271 ZNF213O14771 459 aa11.24□□□□□ -0.61
FKRP-216ENST00000598271 TLR3O15455 904 aaKnown RBP11.24□□□□□ -0.61
FKRP-216ENST00000598271 DYNC1LI2O43237 492 aaPredicted RBP11.24□□□□□ -0.61
FKRP-216ENST00000598271 ITGB8P26012 769 aa11.24□□□□□ -0.61
FKRP-216ENST00000598271 CHMP4BP1P59074 171 aa11.24□□□□□ -0.61
FKRP-216ENST00000598271 FPGSQ05932 587 aa11.24□□□□□ -0.61
FKRP-216ENST00000598271 BAATQ14032 418 aaPredicted RBP11.24□□□□□ -0.61
FKRP-216ENST00000598271 NECTIN1Q15223 517 aa11.24□□□□□ -0.61
FKRP-216ENST00000598271 FAM133AQ8N9E0 248 aa11.24□□□□□ -0.61
FKRP-216ENST00000598271 KLHDC9Q8NEP7 349 aa11.24□□□□□ -0.61
FKRP-216ENST00000598271 CPVLQ9H3G5 476 aa11.24□□□□□ -0.61
FKRP-216ENST00000598271 RNF41Q9H4P4 317 aaPredicted RBP11.24□□□□□ -0.61
FKRP-216ENST00000598271 PDGFCQ9NRA1 345 aa11.24□□□□□ -0.61
FKRP-216ENST00000598271 CYP39A1Q9NYL5 469 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms