RNA–Protein interactions for RNA: ENST00000597649.5

SHKBP1-215, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-215ENST00000597649 SYNPO2Q9UMS6 1093 aa19.59■□□□□ 0.73
SHKBP1-215ENST00000597649 PATL2C9JE40 543 aaKnown RBP19.58■□□□□ 0.72
SHKBP1-215ENST00000597649 FGBP02675 491 aa19.58■□□□□ 0.72
SHKBP1-215ENST00000597649 SMPD1P17405 629 aa19.58■□□□□ 0.72
SHKBP1-215ENST00000597649 CCL23P55773 120 aa19.58■□□□□ 0.72
SHKBP1-215ENST00000597649 SNAP25P60880 206 aa19.58■□□□□ 0.72
SHKBP1-215ENST00000597649 IRX6P78412 446 aaPredicted RBP19.58■□□□□ 0.72
SHKBP1-215ENST00000597649 NOL8Q76FK4 1167 aaKnown RBP19.58■□□□□ 0.72
SHKBP1-215ENST00000597649 OTOP2Q7RTS6 562 aa19.58■□□□□ 0.72
SHKBP1-215ENST00000597649 TRPV6Q9H1D0 765 aa19.58■□□□□ 0.72
SHKBP1-215ENST00000597649 HIPK3Q9H422 1215 aa19.58■□□□□ 0.72
SHKBP1-215ENST00000597649 ACAD9Q9H845 621 aa19.58■□□□□ 0.72
SHKBP1-215ENST00000597649 RNF146Q9NTX7 359 aa19.58■□□□□ 0.72
SHKBP1-215ENST00000597649 RAPGEFL1Q9UHV5 662 aa19.58■□□□□ 0.72
SHKBP1-215ENST00000597649 DYNC1LI2O43237 492 aaPredicted RBP19.57■□□□□ 0.72
SHKBP1-215ENST00000597649 APPP05067 770 aa19.57■□□□□ 0.72
SHKBP1-215ENST00000597649 NEFLP07196 543 aa19.57■□□□□ 0.72
SHKBP1-215ENST00000597649 COL9A1P20849 921 aa19.57■□□□□ 0.72
SHKBP1-215ENST00000597649 ITGA7Q13683 1181 aa19.57■□□□□ 0.72
SHKBP1-215ENST00000597649 FSCN1Q16658 493 aaKnown RBP19.57■□□□□ 0.72
SHKBP1-215ENST00000597649 TAPT1Q6NXT6 567 aa19.57■□□□□ 0.72
SHKBP1-215ENST00000597649 STAG1Q8WVM7 1258 aa19.57■□□□□ 0.72
SHKBP1-215ENST00000597649 SEC62Q99442 399 aaKnown RBP19.57■□□□□ 0.72
SHKBP1-215ENST00000597649 NOC4LQ9BVI4 516 aaKnown RBP19.57■□□□□ 0.72
SHKBP1-215ENST00000597649 MSRAQ9UJ68 235 aa19.57■□□□□ 0.72
SHKBP1-215ENST00000597649 B4GALT4O60513 344 aa19.56■□□□□ 0.72
SHKBP1-215ENST00000597649 FDX1P10109 184 aa19.56■□□□□ 0.72
SHKBP1-215ENST00000597649 GNAT2P19087 354 aa19.56■□□□□ 0.72
SHKBP1-215ENST00000597649 IGFBP4P22692 258 aa19.56■□□□□ 0.72
SHKBP1-215ENST00000597649 MCCP23508 829 aa19.56■□□□□ 0.72
SHKBP1-215ENST00000597649 STAT2P52630 851 aa19.56■□□□□ 0.72
SHKBP1-215ENST00000597649 RABGGTBP53611 331 aa19.56■□□□□ 0.72
SHKBP1-215ENST00000597649 PSMC6P62333 389 aa19.56■□□□□ 0.72
SHKBP1-215ENST00000597649 TFAP4Q01664 338 aa19.56■□□□□ 0.72
SHKBP1-215ENST00000597649 RAB30Q15771 203 aa19.56■□□□□ 0.72
SHKBP1-215ENST00000597649 MUM1L1Q5H9M0 696 aa19.56■□□□□ 0.72
SHKBP1-215ENST00000597649 TLK2Q86UE8 772 aa19.56■□□□□ 0.72
SHKBP1-215ENST00000597649 TRERF1Q96PN7 1200 aa19.56■□□□□ 0.72
SHKBP1-215ENST00000597649 PURBQ96QR8 312 aaKnown RBP19.56■□□□□ 0.72
SHKBP1-215ENST00000597649 WNT8AQ9H1J5 351 aa19.56■□□□□ 0.72
SHKBP1-215ENST00000597649 ZNF287Q9HBT7 754 aa19.56■□□□□ 0.72
SHKBP1-215ENST00000597649 THEGQ9P2T0 379 aa19.56■□□□□ 0.72
SHKBP1-215ENST00000597649 MYH4Q9Y623 1939 aa19.56■□□□□ 0.72
SHKBP1-215ENST00000597649 ASB14A6NK59 587 aa19.55■□□□□ 0.72
SHKBP1-215ENST00000597649 CABYRO75952 493 aa19.55■□□□□ 0.72
SHKBP1-215ENST00000597649 ZFYP08048 801 aaPredicted RBP19.55■□□□□ 0.72
SHKBP1-215ENST00000597649 TSPY3P0CV98 308 aa19.55■□□□□ 0.72
SHKBP1-215ENST00000597649 TSPY8P0CW00 308 aa19.55■□□□□ 0.72
SHKBP1-215ENST00000597649 MYOGP15173 224 aa19.55■□□□□ 0.72
SHKBP1-215ENST00000597649 EEPD1Q7L9B9 569 aa19.55■□□□□ 0.72
SHKBP1-215ENST00000597649 RASGRP2Q7LDG7 609 aa19.55■□□□□ 0.72
SHKBP1-215ENST00000597649 ADAMTS19Q8TE59 1207 aa19.55■□□□□ 0.72
SHKBP1-215ENST00000597649 CHURC1Q8WUH1 139 aa19.55■□□□□ 0.72
SHKBP1-215ENST00000597649 GMCL1Q96IK5 515 aa19.55■□□□□ 0.72
SHKBP1-215ENST00000597649 INCENPQ9NQS7 918 aa19.55■□□□□ 0.72
SHKBP1-215ENST00000597649 PLIN4Q96Q06 1357 aa19.55■□□□□ 0.72
SHKBP1-215ENST00000597649 ALAS1P13196 640 aa19.54■□□□□ 0.72
SHKBP1-215ENST00000597649 SLC1A4P43007 532 aa19.54■□□□□ 0.72
SHKBP1-215ENST00000597649 MRPS5P82675 430 aaKnown RBP19.54■□□□□ 0.72
SHKBP1-215ENST00000597649 IQSEC1Q6DN90 963 aa19.54■□□□□ 0.72
SHKBP1-215ENST00000597649 FAM160B2Q86V87 743 aa19.54■□□□□ 0.72
SHKBP1-215ENST00000597649 FBXO16Q8IX29 292 aaPredicted RBP19.54■□□□□ 0.72
SHKBP1-215ENST00000597649 EXOC6Q8TAG9 804 aa19.54■□□□□ 0.72
SHKBP1-215ENST00000597649 AP5M1Q9H0R1 490 aa19.54■□□□□ 0.72
SHKBP1-215ENST00000597649 CYP39A1Q9NYL5 469 aa19.54■□□□□ 0.72
SHKBP1-215ENST00000597649 ISY1Q9ULR0 285 aaKnown RBP19.54■□□□□ 0.72
SHKBP1-215ENST00000597649 TKFCQ3LXA3 575 aa19.53■□□□□ 0.72
SHKBP1-215ENST00000597649 KCTD1Q719H9 257 aa19.53■□□□□ 0.72
SHKBP1-215ENST00000597649 SCLYQ96I15 445 aa19.53■□□□□ 0.72
SHKBP1-215ENST00000597649 DCTPP1Q9H773 170 aa19.53■□□□□ 0.72
SHKBP1-215ENST00000597649 SLC28A3Q9HAS3 691 aa19.53■□□□□ 0.72
SHKBP1-215ENST00000597649 IL17RBQ9NRM6 502 aa19.53■□□□□ 0.72
SHKBP1-215ENST00000597649 NMT2O60551 498 aa19.52■□□□□ 0.72
SHKBP1-215ENST00000597649 PLA2G6O60733 806 aa19.52■□□□□ 0.72
SHKBP1-215ENST00000597649 PDE4BQ07343 736 aa19.52■□□□□ 0.72
SHKBP1-215ENST00000597649 PPARAQ07869 468 aa19.52■□□□□ 0.72
SHKBP1-215ENST00000597649 IKQ13123 557 aaPredicted RBP19.52■□□□□ 0.72
SHKBP1-215ENST00000597649 AAMPQ13685 434 aa19.52■□□□□ 0.72
SHKBP1-215ENST00000597649 RCSD1Q6JBY9 416 aa19.52■□□□□ 0.72
SHKBP1-215ENST00000597649 MTIF3Q9H2K0 278 aaKnown RBP19.52■□□□□ 0.72
SHKBP1-215ENST00000597649 PRR12Q9ULL5 1215 aa19.52■□□□□ 0.72
SHKBP1-215ENST00000597649 Q9Y3F1 56 aa19.52■□□□□ 0.72
SHKBP1-215ENST00000597649 FOXP2O15409 715 aa19.51■□□□□ 0.71
SHKBP1-215ENST00000597649 MORC4Q8TE76 937 aa19.51■□□□□ 0.71
SHKBP1-215ENST00000597649 UHRF1Q96T88 793 aaPredicted RBP19.51■□□□□ 0.71
SHKBP1-215ENST00000597649 ALDH8A1Q9H2A2 487 aaPredicted RBP19.51■□□□□ 0.71
SHKBP1-215ENST00000597649 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.51■□□□□ 0.71
SHKBP1-215ENST00000597649 ZEB2O60315 1214 aa19.5■□□□□ 0.71
SHKBP1-215ENST00000597649 CYP2C9P11712 490 aa19.5■□□□□ 0.71
SHKBP1-215ENST00000597649 TTLL4Q14679 1199 aa19.5■□□□□ 0.71
SHKBP1-215ENST00000597649 KIAA1211Q6ZU35 1233 aa19.5■□□□□ 0.71
SHKBP1-215ENST00000597649 GPATCH3Q96I76 525 aa19.5■□□□□ 0.71
SHKBP1-215ENST00000597649 SEZ6LQ9BYH1 1024 aa19.5■□□□□ 0.71
SHKBP1-215ENST00000597649 NACAP1Q9BZK3 213 aa19.5■□□□□ 0.71
SHKBP1-215ENST00000597649 TRMT13Q9NUP7 481 aaKnown RBP19.5■□□□□ 0.71
SHKBP1-215ENST00000597649 SLC4A7Q9Y6M7 1214 aa19.5■□□□□ 0.71
SHKBP1-215ENST00000597649 BMP1P13497 986 aa19.49■□□□□ 0.71
SHKBP1-215ENST00000597649 ZMYM1Q5SVZ6 1142 aa19.49■□□□□ 0.71
SHKBP1-215ENST00000597649 NSMFQ6X4W1 530 aa19.49■□□□□ 0.71
SHKBP1-215ENST00000597649 RPUSD2Q8IZ73 545 aaKnown RBP19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms