RNA–Protein interactions for RNA: ENST00000597369.1

IRF3-218, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-218ENST00000597369 ZNF292O60281 2723 aa15.73■□□□□ 0.11
IRF3-218ENST00000597369 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.73■□□□□ 0.11
IRF3-218ENST00000597369 LINC01553A4QN01 128 aa15.73■□□□□ 0.11
IRF3-218ENST00000597369 TMEM221A6NGB7 291 aa15.73■□□□□ 0.11
IRF3-218ENST00000597369 M0R296 226 aa15.73■□□□□ 0.11
IRF3-218ENST00000597369 CYP7A1P22680 504 aa15.73■□□□□ 0.11
IRF3-218ENST00000597369 ID4P47928 161 aa15.73■□□□□ 0.11
IRF3-218ENST00000597369 PSMC6P62333 389 aa15.73■□□□□ 0.11
IRF3-218ENST00000597369 TLK2Q86UE8 772 aa15.73■□□□□ 0.11
IRF3-218ENST00000597369 RNF135Q8IUD6 432 aa15.73■□□□□ 0.11
IRF3-218ENST00000597369 CCDC144CPQ8IYA2 1237 aa15.73■□□□□ 0.11
IRF3-218ENST00000597369 ATOH1Q92858 354 aaPredicted RBP15.73■□□□□ 0.11
IRF3-218ENST00000597369 MRPL38Q96DV4 380 aaKnown RBP15.73■□□□□ 0.11
IRF3-218ENST00000597369 ZBED2Q9BTP6 218 aa15.73■□□□□ 0.11
IRF3-218ENST00000597369 FTOQ9C0B1 505 aaKnown RBP eCLIP15.73■□□□□ 0.11
IRF3-218ENST00000597369 AP5M1Q9H0R1 490 aa15.73■□□□□ 0.11
IRF3-218ENST00000597369 Q9Y3F1 56 aa15.73■□□□□ 0.11
IRF3-218ENST00000597369 RIPK3Q9Y572 518 aa15.73■□□□□ 0.11
IRF3-218ENST00000597369 NAV1Q8NEY1 1877 aa15.72■□□□□ 0.11
IRF3-218ENST00000597369 GJB5O95377 273 aa15.72■□□□□ 0.11
IRF3-218ENST00000597369 WDR5P61964 334 aaKnown RBP15.72■□□□□ 0.11
IRF3-218ENST00000597369 SMAD2Q15796 467 aaKnown RBP15.72■□□□□ 0.11
IRF3-218ENST00000597369 SNRNP48Q6IEG0 339 aaKnown RBP15.72■□□□□ 0.11
IRF3-218ENST00000597369 FBXL6Q8N531 539 aa15.72■□□□□ 0.11
IRF3-218ENST00000597369 MIGA1Q8NAN2 632 aa15.72■□□□□ 0.11
IRF3-218ENST00000597369 MTUS1Q9ULD2 1270 aa15.72■□□□□ 0.11
IRF3-218ENST00000597369 ATP2A1O14983 1001 aa15.71■□□□□ 0.11
IRF3-218ENST00000597369 POLR3DP05423 398 aaPredicted RBP15.71■□□□□ 0.11
IRF3-218ENST00000597369 ICA1Q05084 483 aa15.71■□□□□ 0.11
IRF3-218ENST00000597369 TMED8Q6PL24 325 aaPredicted RBP15.71■□□□□ 0.11
IRF3-218ENST00000597369 NOL8Q76FK4 1167 aaKnown RBP15.71■□□□□ 0.11
IRF3-218ENST00000597369 RETREG2Q8NC44 543 aa15.71■□□□□ 0.11
IRF3-218ENST00000597369 ZNF512BQ96KM6 892 aaPredicted RBP15.71■□□□□ 0.11
IRF3-218ENST00000597369 SCN10AQ9Y5Y9 1956 aa15.71■□□□□ 0.1
IRF3-218ENST00000597369 DYNC1LI2O43237 492 aaPredicted RBP15.7■□□□□ 0.1
IRF3-218ENST00000597369 RGS20O76081 388 aa15.7■□□□□ 0.1
IRF3-218ENST00000597369 PTPROQ16827 1216 aa15.7■□□□□ 0.1
IRF3-218ENST00000597369 TIGD5Q53EQ6 642 aa15.7■□□□□ 0.1
IRF3-218ENST00000597369 ASCL5Q7RTU5 278 aa15.7■□□□□ 0.1
IRF3-218ENST00000597369 ANKRD35Q8N283 1001 aa15.7■□□□□ 0.1
IRF3-218ENST00000597369 SALL2Q9Y467 1007 aaPredicted RBP15.7■□□□□ 0.1
IRF3-218ENST00000597369 BAHCC1Q9P281 2608 aa15.69■□□□□ 0.1
IRF3-218ENST00000597369 DMXL1Q9Y485 3027 aa15.69■□□□□ 0.1
IRF3-218ENST00000597369 KRT37O76014 449 aa15.69■□□□□ 0.1
IRF3-218ENST00000597369 SMPD1P17405 629 aa15.69■□□□□ 0.1
IRF3-218ENST00000597369 NUBP1P53384 320 aa15.69■□□□□ 0.1
IRF3-218ENST00000597369 MTX1Q13505 466 aa15.69■□□□□ 0.1
IRF3-218ENST00000597369 LRRFIP1Q32MZ4 808 aaKnown RBP15.69■□□□□ 0.1
IRF3-218ENST00000597369 CCDC158Q5M9N0 1113 aa15.69■□□□□ 0.1
IRF3-218ENST00000597369 TTC39AQ5SRH9 613 aa15.69■□□□□ 0.1
IRF3-218ENST00000597369 BANK1Q8NDB2 785 aa15.69■□□□□ 0.1
IRF3-218ENST00000597369 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.69■□□□□ 0.1
IRF3-218ENST00000597369 PIH1D3Q9NQM4 214 aaKnown RBP15.69■□□□□ 0.1
IRF3-218ENST00000597369 SWAP70Q9UH65 585 aa15.69■□□□□ 0.1
IRF3-218ENST00000597369 TRPC6Q9Y210 931 aa15.69■□□□□ 0.1
IRF3-218ENST00000597369 NCOR2Q9Y618 2525 aa15.69■□□□□ 0.1
IRF3-218ENST00000597369 PRR23AA6NEV1 266 aa15.68■□□□□ 0.1
IRF3-218ENST00000597369 SRGAP3O43295 1099 aa15.68■□□□□ 0.1
IRF3-218ENST00000597369 NCK2O43639 380 aa15.68■□□□□ 0.1
IRF3-218ENST00000597369 NEFLP07196 543 aa15.68■□□□□ 0.1
IRF3-218ENST00000597369 BFSP2Q13515 415 aa15.68■□□□□ 0.1
IRF3-218ENST00000597369 IQSEC1Q6DN90 963 aa15.68■□□□□ 0.1
IRF3-218ENST00000597369 TMCO2Q7Z6W1 182 aaPredicted RBP15.68■□□□□ 0.1
IRF3-218ENST00000597369 CLEC10AQ8IUN9 316 aa15.68■□□□□ 0.1
IRF3-218ENST00000597369 FBXO22Q8NEZ5 403 aa15.68■□□□□ 0.1
IRF3-218ENST00000597369 FBXO40Q9UH90 709 aa15.68■□□□□ 0.1
IRF3-218ENST00000597369 CHD8Q9HCK8 2581 aa15.67■□□□□ 0.1
IRF3-218ENST00000597369 ACACBO00763 2458 aa15.67■□□□□ 0.1
IRF3-218ENST00000597369 LTBRP36941 435 aa15.67■□□□□ 0.1
IRF3-218ENST00000597369 ZAP70P43403 619 aa15.67■□□□□ 0.1
IRF3-218ENST00000597369 DEFB103AP81534 67 aa15.67■□□□□ 0.1
IRF3-218ENST00000597369 ZXDAP98168 799 aa15.67■□□□□ 0.1
IRF3-218ENST00000597369 CHST13Q8NET6 341 aa15.67■□□□□ 0.1
IRF3-218ENST00000597369 SSH1Q8WYL5 1049 aa15.67■□□□□ 0.1
IRF3-218ENST00000597369 SLF1Q9BQI6 1058 aa15.67■□□□□ 0.1
IRF3-218ENST00000597369 GOPCQ9HD26 462 aa15.67■□□□□ 0.1
IRF3-218ENST00000597369 POLR3EQ9NVU0 708 aa15.67■□□□□ 0.1
IRF3-218ENST00000597369 COL4A6Q14031 1691 aa15.67■□□□□ 0.1
IRF3-218ENST00000597369 ASB14A6NK59 587 aa15.66■□□□□ 0.1
IRF3-218ENST00000597369 AKR1B1P15121 316 aa15.66■□□□□ 0.1
IRF3-218ENST00000597369 AVPR2P30518 371 aa15.66■□□□□ 0.1
IRF3-218ENST00000597369 EVX2Q03828 476 aa15.66■□□□□ 0.1
IRF3-218ENST00000597369 CTC1Q2NKJ3 1217 aa15.66■□□□□ 0.1
IRF3-218ENST00000597369 TCEAL5Q5H9L2 206 aa15.66■□□□□ 0.1
IRF3-218ENST00000597369 FAM83BQ5T0W9 1011 aa15.66■□□□□ 0.1
IRF3-218ENST00000597369 FAM133AQ8N9E0 248 aa15.66■□□□□ 0.1
IRF3-218ENST00000597369 CCDC17Q96LX7 622 aa15.66■□□□□ 0.1
IRF3-218ENST00000597369 RIOK1Q9BRS2 568 aaKnown RBP15.66■□□□□ 0.1
IRF3-218ENST00000597369 FSD1Q9BTV5 496 aa15.66■□□□□ 0.1
IRF3-218ENST00000597369 GPR108Q9NPR9 543 aa15.66■□□□□ 0.1
IRF3-218ENST00000597369 MCM9Q9NXL9 1143 aa15.66■□□□□ 0.1
IRF3-218ENST00000597369 EP300Q09472 2414 aaPredicted RBP15.65■□□□□ 0.1
IRF3-218ENST00000597369 ABHD14A-ACY1A0A1B0GW23 586 aa15.65■□□□□ 0.1
IRF3-218ENST00000597369 MBTPS2O43462 519 aa15.65■□□□□ 0.1
IRF3-218ENST00000597369 EEF2P13639 858 aaKnown RBP15.65■□□□□ 0.1
IRF3-218ENST00000597369 NBL1P41271 181 aa15.65■□□□□ 0.1
IRF3-218ENST00000597369 PURAQ00577 322 aaKnown RBP15.65■□□□□ 0.1
IRF3-218ENST00000597369 PTPN11Q06124 597 aaPredicted RBP15.65■□□□□ 0.1
IRF3-218ENST00000597369 GPNMBQ14956 572 aa15.65■□□□□ 0.1
IRF3-218ENST00000597369 TAPT1Q6NXT6 567 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms