RNA–Protein interactions for RNA: ENST00000597365.1

PAF1-206, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 606 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-206ENST00000597365 NSMFQ6X4W1 530 aa17.22■□□□□ 0.35
PAF1-206ENST00000597365 CLEC4DQ8WXI8 215 aa17.22■□□□□ 0.35
PAF1-206ENST00000597365 MTMR8Q96EF0 704 aa17.22■□□□□ 0.35
PAF1-206ENST00000597365 RIOX1Q9H6W3 641 aa17.22■□□□□ 0.35
PAF1-206ENST00000597365 ZSWIM6Q9HCJ5 1215 aa17.22■□□□□ 0.35
PAF1-206ENST00000597365 PDE4DIPQ5VU43 2346 aa17.22■□□□□ 0.35
PAF1-206ENST00000597365 RPTORQ8N122 1335 aa17.21■□□□□ 0.35
PAF1-206ENST00000597365 PLEKHA8P1O95397 391 aa17.21■□□□□ 0.35
PAF1-206ENST00000597365 CALM1P0DP23 149 aa17.21■□□□□ 0.35
PAF1-206ENST00000597365 CALM2P0DP24 149 aa17.21■□□□□ 0.35
PAF1-206ENST00000597365 CALM3P0DP25 149 aa17.21■□□□□ 0.35
PAF1-206ENST00000597365 KIF5BP33176 963 aa17.21■□□□□ 0.35
PAF1-206ENST00000597365 FGD1P98174 961 aa17.21■□□□□ 0.35
PAF1-206ENST00000597365 RUFY3Q7L099 469 aa17.21■□□□□ 0.35
PAF1-206ENST00000597365 MICU3Q86XE3 530 aa17.21■□□□□ 0.35
PAF1-206ENST00000597365 FBXO11Q86XK2 927 aa17.21■□□□□ 0.35
PAF1-206ENST00000597365 HOMER1Q86YM7 354 aa17.21■□□□□ 0.35
PAF1-206ENST00000597365 PIGSQ96S52 555 aa17.21■□□□□ 0.35
PAF1-206ENST00000597365 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.21■□□□□ 0.35
PAF1-206ENST00000597365 HMX1Q9NP08 348 aaPredicted RBP17.21■□□□□ 0.35
PAF1-206ENST00000597365 PNMA2Q9UL42 364 aa17.21■□□□□ 0.35
PAF1-206ENST00000597365 DIS3Q9Y2L1 958 aaKnown RBP17.21■□□□□ 0.35
PAF1-206ENST00000597365 MCM3APO60318 1980 aa17.2■□□□□ 0.34
PAF1-206ENST00000597365 KLF18A0A0U1RQI7 1052 aa17.2■□□□□ 0.34
PAF1-206ENST00000597365 ZBTB5O15062 677 aa17.2■□□□□ 0.34
PAF1-206ENST00000597365 PPP1R11O60927 126 aaPredicted RBP17.2■□□□□ 0.34
PAF1-206ENST00000597365 EN2P19622 333 aaPredicted RBP17.2■□□□□ 0.34
PAF1-206ENST00000597365 CCND3P30281 292 aaPredicted RBP17.2■□□□□ 0.34
PAF1-206ENST00000597365 CNTN2Q02246 1040 aa17.2■□□□□ 0.34
PAF1-206ENST00000597365 APOBRQ0VD83 1088 aa17.2■□□□□ 0.34
PAF1-206ENST00000597365 SYNE3Q6ZMZ3 975 aa17.2■□□□□ 0.34
PAF1-206ENST00000597365 CMTR1Q8N1G2 835 aaKnown RBP17.2■□□□□ 0.34
PAF1-206ENST00000597365 FANCBQ8NB91 859 aa17.2■□□□□ 0.34
PAF1-206ENST00000597365 TRPV1Q8NER1 839 aa17.2■□□□□ 0.34
PAF1-206ENST00000597365 PIBF1Q8WXW3 757 aa17.2■□□□□ 0.34
PAF1-206ENST00000597365 BRF1Q92994 677 aa17.2■□□□□ 0.34
PAF1-206ENST00000597365 FGD4Q96M96 766 aa17.2■□□□□ 0.34
PAF1-206ENST00000597365 TM6SF1Q9BZW5 370 aa17.2■□□□□ 0.34
PAF1-206ENST00000597365 PAK6Q9NQU5 681 aaPredicted RBP17.2■□□□□ 0.34
PAF1-206ENST00000597365 CYP39A1Q9NYL5 469 aa17.2■□□□□ 0.34
PAF1-206ENST00000597365 BRCA2P51587 3418 aa17.2■□□□□ 0.34
PAF1-206ENST00000597365 PFASO15067 1338 aa17.2■□□□□ 0.34
PAF1-206ENST00000597365 ABCB11O95342 1321 aa17.2■□□□□ 0.34
PAF1-206ENST00000597365 POTEB2H3BUK9 544 aa17.19■□□□□ 0.34
PAF1-206ENST00000597365 ZBTB43O43298 467 aa17.19■□□□□ 0.34
PAF1-206ENST00000597365 EIF5BO60841 1220 aaKnown RBP17.19■□□□□ 0.34
PAF1-206ENST00000597365 GJB1P08034 283 aa17.19■□□□□ 0.34
PAF1-206ENST00000597365 PRAMEF19Q5SWL8 479 aa17.19■□□□□ 0.34
PAF1-206ENST00000597365 SRBD1Q8N5C6 995 aaKnown RBP17.19■□□□□ 0.34
PAF1-206ENST00000597365 FAM133AQ8N9E0 248 aa17.19■□□□□ 0.34
PAF1-206ENST00000597365 TINF2Q9BSI4 451 aa17.19■□□□□ 0.34
PAF1-206ENST00000597365 AMNQ9BXJ7 453 aa17.19■□□□□ 0.34
PAF1-206ENST00000597365 AGXT2Q9BYV1 514 aa17.19■□□□□ 0.34
PAF1-206ENST00000597365 UPF3BQ9BZI7 483 aaKnown RBP17.19■□□□□ 0.34
PAF1-206ENST00000597365 NAP1L2Q9ULW6 460 aaPredicted RBP17.19■□□□□ 0.34
PAF1-206ENST00000597365 CYP46A1Q9Y6A2 500 aa17.19■□□□□ 0.34
PAF1-206ENST00000597365 PTPDC1A2A3K4 754 aa17.18■□□□□ 0.34
PAF1-206ENST00000597365 SOWAHBA6NEL2 793 aa17.18■□□□□ 0.34
PAF1-206ENST00000597365 CYBAP13498 195 aa17.18■□□□□ 0.34
PAF1-206ENST00000597365 GJA8P48165 433 aa17.18■□□□□ 0.34
PAF1-206ENST00000597365 GNAQP50148 359 aa17.18■□□□□ 0.34
PAF1-206ENST00000597365 BAATQ14032 418 aaPredicted RBP17.18■□□□□ 0.34
PAF1-206ENST00000597365 SLC30A10Q6XR72 485 aa17.18■□□□□ 0.34
PAF1-206ENST00000597365 TMTC3Q6ZXV5 915 aa17.18■□□□□ 0.34
PAF1-206ENST00000597365 FBXL16Q8N461 479 aa17.18■□□□□ 0.34
PAF1-206ENST00000597365 U2AF1L4Q8WU68 220 aaKnown RBP17.18■□□□□ 0.34
PAF1-206ENST00000597365 SHISA4Q96DD7 197 aa17.18■□□□□ 0.34
PAF1-206ENST00000597365 DEFB118Q96PH6 123 aa17.18■□□□□ 0.34
PAF1-206ENST00000597365 PURBQ96QR8 312 aaKnown RBP17.18■□□□□ 0.34
PAF1-206ENST00000597365 LZTS2Q9BRK4 669 aa17.18■□□□□ 0.34
PAF1-206ENST00000597365 SPZ1Q9BXG8 430 aa17.18■□□□□ 0.34
PAF1-206ENST00000597365 PCDH10Q9P2E7 1040 aa17.18■□□□□ 0.34
PAF1-206ENST00000597365 TNRC18O15417 2968 aaPredicted RBP17.17■□□□□ 0.34
PAF1-206ENST00000597365 PNMA6FA0A0J9YX94 578 aa17.17■□□□□ 0.34
PAF1-206ENST00000597365 GOLGA8AA7E2F4 631 aa17.17■□□□□ 0.34
PAF1-206ENST00000597365 GOLGA8BA8MQT2 603 aa17.17■□□□□ 0.34
PAF1-206ENST00000597365 SGPL1O95470 568 aa17.17■□□□□ 0.34
PAF1-206ENST00000597365 SMARCA1P28370 1054 aa17.17■□□□□ 0.34
PAF1-206ENST00000597365 ANAPC15P60006 121 aa17.17■□□□□ 0.34
PAF1-206ENST00000597365 TOB2Q14106 344 aaPredicted RBP17.17■□□□□ 0.34
PAF1-206ENST00000597365 RTN1Q16799 776 aa17.17■□□□□ 0.34
PAF1-206ENST00000597365 RNF207Q6ZRF8 634 aa17.17■□□□□ 0.34
PAF1-206ENST00000597365 ZNF467Q7Z7K2 595 aaPredicted RBP17.17■□□□□ 0.34
PAF1-206ENST00000597365 CCDC82Q8N4S0 544 aa17.17■□□□□ 0.34
PAF1-206ENST00000597365 TBC1D5Q92609 795 aa17.17■□□□□ 0.34
PAF1-206ENST00000597365 MRPL11Q9Y3B7 192 aaKnown RBP17.17■□□□□ 0.34
PAF1-206ENST00000597365 ASTN1O14525 1302 aa17.17■□□□□ 0.34
PAF1-206ENST00000597365 SNAI1O95863 264 aaPredicted RBP17.16■□□□□ 0.34
PAF1-206ENST00000597365 CALML3P27482 149 aa17.16■□□□□ 0.34
PAF1-206ENST00000597365 CNGA1P29973 690 aa17.16■□□□□ 0.34
PAF1-206ENST00000597365 CDC27P30260 824 aa17.16■□□□□ 0.34
PAF1-206ENST00000597365 RPS6P62753 249 aaKnown RBP17.16■□□□□ 0.34
PAF1-206ENST00000597365 MAMDC4Q6UXC1 1216 aa17.16■□□□□ 0.34
PAF1-206ENST00000597365 MSL3Q8N5Y2 521 aaKnown RBP17.16■□□□□ 0.34
PAF1-206ENST00000597365 RRP36Q96EU6 259 aaKnown RBP17.16■□□□□ 0.34
PAF1-206ENST00000597365 FAM217BQ9NTX9 383 aaPredicted RBP17.16■□□□□ 0.34
PAF1-206ENST00000597365 PDRG1Q9NUG6 133 aa17.16■□□□□ 0.34
PAF1-206ENST00000597365 RBM28Q9NW13 759 aaKnown RBP17.16■□□□□ 0.34
PAF1-206ENST00000597365 PCDHA1Q9Y5I3 950 aa17.16■□□□□ 0.34
PAF1-206ENST00000597365 DDX49Q9Y6V7 483 aaKnown RBP17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms