RNA–Protein interactions for RNA: ENST00000596726.3

PNKP-209, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 637 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-209ENST00000596726 KLRF2D3W0D1 207 aa24.59■■□□□ 1.53
PNKP-209ENST00000596726 NFIBO00712 420 aa24.59■■□□□ 1.53
PNKP-209ENST00000596726 SH2B2O14492 632 aaPredicted RBP24.59■■□□□ 1.53
PNKP-209ENST00000596726 ZNF865P0CJ78 1059 aaPredicted RBP24.59■■□□□ 1.53
PNKP-209ENST00000596726 KCNB2Q92953 911 aa24.59■■□□□ 1.53
PNKP-209ENST00000596726 MTMR8Q96EF0 704 aa24.59■■□□□ 1.53
PNKP-209ENST00000596726 BAZ2BQ9UIF8 2168 aaKnown RBP24.59■■□□□ 1.53
PNKP-209ENST00000596726 LIFRP42702 1097 aa24.58■■□□□ 1.53
PNKP-209ENST00000596726 NSMFQ6X4W1 530 aa24.58■■□□□ 1.53
PNKP-209ENST00000596726 NECAB2Q7Z6G3 386 aa24.58■■□□□ 1.53
PNKP-209ENST00000596726 CATIPQ7Z7H3 387 aa24.58■■□□□ 1.53
PNKP-209ENST00000596726 SLC35G1Q2M3R5 365 aa24.57■■□□□ 1.52
PNKP-209ENST00000596726 QRICH1Q2TAL8 776 aa24.57■■□□□ 1.52
PNKP-209ENST00000596726 TMTC2Q8N394 836 aa24.57■■□□□ 1.52
PNKP-209ENST00000596726 NEK1Q96PY6 1258 aa24.57■■□□□ 1.52
PNKP-209ENST00000596726 MAP3K14Q99558 947 aa24.57■■□□□ 1.52
PNKP-209ENST00000596726 VAT1LQ9HCJ6 419 aa24.57■■□□□ 1.52
PNKP-209ENST00000596726 ASTN1O14525 1302 aa24.57■■□□□ 1.52
PNKP-209ENST00000596726 ALPK3Q96L96 1907 aa24.57■■□□□ 1.52
PNKP-209ENST00000596726 BAATQ14032 418 aaPredicted RBP24.56■■□□□ 1.52
PNKP-209ENST00000596726 ADCK5Q3MIX3 580 aa24.56■■□□□ 1.52
PNKP-209ENST00000596726 ARMCX2Q7L311 632 aa24.56■■□□□ 1.52
PNKP-209ENST00000596726 ZNF654Q8IZM8 581 aa24.56■■□□□ 1.52
PNKP-209ENST00000596726 RIOX1Q9H6W3 641 aa24.56■■□□□ 1.52
PNKP-209ENST00000596726 CDKN2AIPQ9NXV6 580 aaPredicted RBP24.56■■□□□ 1.52
PNKP-209ENST00000596726 CNPY2Q9Y2B0 182 aa24.56■■□□□ 1.52
PNKP-209ENST00000596726 DDAH1O94760 285 aa24.55■■□□□ 1.52
PNKP-209ENST00000596726 REC8O95072 547 aa24.55■■□□□ 1.52
PNKP-209ENST00000596726 COL6A1P12109 1028 aa24.55■■□□□ 1.52
PNKP-209ENST00000596726 HSPA4P34932 840 aa24.55■■□□□ 1.52
PNKP-209ENST00000596726 EXOSC10Q01780 885 aaKnown RBP24.55■■□□□ 1.52
PNKP-209ENST00000596726 KRT32Q14532 448 aa24.55■■□□□ 1.52
PNKP-209ENST00000596726 USH1GQ495M9 461 aa24.55■■□□□ 1.52
PNKP-209ENST00000596726 CCDC144CPQ8IYA2 1237 aa24.55■■□□□ 1.52
PNKP-209ENST00000596726 RGS22Q8NE09 1264 aa24.55■■□□□ 1.52
PNKP-209ENST00000596726 HTATIP2Q9BUP3 242 aa24.55■■□□□ 1.52
PNKP-209ENST00000596726 MAF1Q9H063 256 aa24.55■■□□□ 1.52
PNKP-209ENST00000596726 KATNBL1Q9H079 304 aa24.55■■□□□ 1.52
PNKP-209ENST00000596726 ABCB11O95342 1321 aa24.55■■□□□ 1.52
PNKP-209ENST00000596726 ASB14A6NK59 587 aa24.54■■□□□ 1.52
PNKP-209ENST00000596726 EPB41L2O43491 1005 aaKnown RBP24.54■■□□□ 1.52
PNKP-209ENST00000596726 DHX16O60231 1041 aaKnown RBP24.54■■□□□ 1.52
PNKP-209ENST00000596726 ACVR2BQ13705 512 aa24.54■■□□□ 1.52
PNKP-209ENST00000596726 ANO1Q5XXA6 986 aa24.54■■□□□ 1.52
PNKP-209ENST00000596726 FBXO11Q86XK2 927 aa24.54■■□□□ 1.52
PNKP-209ENST00000596726 PURBQ96QR8 312 aaKnown RBP24.54■■□□□ 1.52
PNKP-209ENST00000596726 LRRC2Q9BYS8 371 aa24.54■■□□□ 1.52
PNKP-209ENST00000596726 ABHD16BQ9H3Z7 469 aa24.54■■□□□ 1.52
PNKP-209ENST00000596726 C11orf49Q9H6J7 331 aa24.54■■□□□ 1.52
PNKP-209ENST00000596726 LRRC37A2A6NM11 1700 aa24.53■■□□□ 1.52
PNKP-209ENST00000596726 CYTH3O43739 400 aa24.53■■□□□ 1.52
PNKP-209ENST00000596726 AKR1A1P14550 325 aa24.53■■□□□ 1.52
PNKP-209ENST00000596726 RNF207Q6ZRF8 634 aa24.53■■□□□ 1.52
PNKP-209ENST00000596726 DHX32Q7L7V1 743 aaKnown RBP24.53■■□□□ 1.52
PNKP-209ENST00000596726 SGMS1Q86VZ5 419 aa24.53■■□□□ 1.52
PNKP-209ENST00000596726 MORC4Q8TE76 937 aa24.53■■□□□ 1.52
PNKP-209ENST00000596726 NUP133Q8WUM0 1156 aa24.53■■□□□ 1.52
PNKP-209ENST00000596726 MYL10Q9BUA6 226 aa24.53■■□□□ 1.52
PNKP-209ENST00000596726 PTPDC1A2A3K4 754 aa24.52■■□□□ 1.52
PNKP-209ENST00000596726 CCDC69A6NI79 296 aa24.52■■□□□ 1.52
PNKP-209ENST00000596726 ZBTB5O15062 677 aa24.52■■□□□ 1.52
PNKP-209ENST00000596726 RPS6P62753 249 aaKnown RBP24.52■■□□□ 1.52
PNKP-209ENST00000596726 PRPF38BQ5VTL8 546 aaKnown RBP24.52■■□□□ 1.52
PNKP-209ENST00000596726 SLC30A10Q6XR72 485 aa24.52■■□□□ 1.52
PNKP-209ENST00000596726 NFXL1Q6ZNB6 911 aa24.52■■□□□ 1.52
PNKP-209ENST00000596726 ARRDC4Q8NCT1 418 aa24.52■■□□□ 1.52
PNKP-209ENST00000596726 SNX14Q9Y5W7 946 aa24.52■■□□□ 1.52
PNKP-209ENST00000596726 LOC102724159A0A0B4J2E5 919 aa24.51■■□□□ 1.51
PNKP-209ENST00000596726 DNM1LO00429 736 aa24.51■■□□□ 1.51
PNKP-209ENST00000596726 PPP1R11O60927 126 aaPredicted RBP24.51■■□□□ 1.51
PNKP-209ENST00000596726 RARBP10826 455 aa24.51■■□□□ 1.51
PNKP-209ENST00000596726 PWP2Q15269 919 aaKnown RBP24.51■■□□□ 1.51
PNKP-209ENST00000596726 DPF3Q92784 378 aa24.51■■□□□ 1.51
PNKP-209ENST00000596726 AMNQ9BXJ7 453 aa24.51■■□□□ 1.51
PNKP-209ENST00000596726 ADD3Q9UEY8 706 aaKnown RBP24.51■■□□□ 1.51
PNKP-209ENST00000596726 ZHX1Q9UKY1 873 aaPredicted RBP24.51■■□□□ 1.51
PNKP-209ENST00000596726 FAM184BQ9ULE4 1060 aa24.51■■□□□ 1.51
PNKP-209ENST00000596726 MRPL11Q9Y3B7 192 aaKnown RBP24.51■■□□□ 1.51
PNKP-209ENST00000596726 DNAH12Q6ZR08 3092 aa24.5■■□□□ 1.51
PNKP-209ENST00000596726 HMGB1P09429 215 aaKnown RBP24.5■■□□□ 1.51
PNKP-209ENST00000596726 CALM1P0DP23 149 aa24.5■■□□□ 1.51
PNKP-209ENST00000596726 CALM2P0DP24 149 aa24.5■■□□□ 1.51
PNKP-209ENST00000596726 CALM3P0DP25 149 aa24.5■■□□□ 1.51
PNKP-209ENST00000596726 SMARCA1P28370 1054 aa24.5■■□□□ 1.51
PNKP-209ENST00000596726 KIF5BP33176 963 aa24.5■■□□□ 1.51
PNKP-209ENST00000596726 ALDH5A1P51649 535 aaPredicted RBP24.5■■□□□ 1.51
PNKP-209ENST00000596726 CTCFLQ8NI51 663 aaPredicted RBP24.5■■□□□ 1.51
PNKP-209ENST00000596726 TBC1D5Q92609 795 aa24.5■■□□□ 1.51
PNKP-209ENST00000596726 PIGSQ96S52 555 aa24.5■■□□□ 1.51
PNKP-209ENST00000596726 CALML3P27482 149 aa24.49■■□□□ 1.51
PNKP-209ENST00000596726 LRRC41Q15345 812 aa24.49■■□□□ 1.51
PNKP-209ENST00000596726 CCDC144BQ3MJ40 725 aa24.49■■□□□ 1.51
PNKP-209ENST00000596726 GJC2Q5T442 439 aaPredicted RBP24.49■■□□□ 1.51
PNKP-209ENST00000596726 TCEANC2Q96MN5 208 aa24.49■■□□□ 1.51
PNKP-209ENST00000596726 SPZ1Q9BXG8 430 aa24.49■■□□□ 1.51
PNKP-209ENST00000596726 SLC12A7Q9Y666 1083 aa24.49■■□□□ 1.51
PNKP-209ENST00000596726 DDX49Q9Y6V7 483 aaKnown RBP24.49■■□□□ 1.51
PNKP-209ENST00000596726 OPLAHO14841 1288 aa24.48■■□□□ 1.51
PNKP-209ENST00000596726 GNAQP50148 359 aa24.48■■□□□ 1.51
PNKP-209ENST00000596726 MCF2L2Q86YR7 1114 aa24.48■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms