RNA–Protein interactions for RNA: ENST00000596549.5

LIG1-212, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-212ENST00000596549 FERMT2Q96AC1 680 aa15.33■□□□□ 0.04
LIG1-212ENST00000596549 ZSCAN10Q96SZ4 725 aaPredicted RBP15.33■□□□□ 0.04
LIG1-212ENST00000596549 ABHD16BQ9H3Z7 469 aa15.33■□□□□ 0.04
LIG1-212ENST00000596549 FAM184BQ9ULE4 1060 aa15.33■□□□□ 0.04
LIG1-212ENST00000596549 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.32■□□□□ 0.04
LIG1-212ENST00000596549 A0A1W2PQ45 241 aaPredicted RBP15.32■□□□□ 0.04
LIG1-212ENST00000596549 A0A1W2PQY0 241 aa15.32■□□□□ 0.04
LIG1-212ENST00000596549 SGSM2O43147 1006 aa15.32■□□□□ 0.04
LIG1-212ENST00000596549 CYP21A2P08686 494 aa15.32■□□□□ 0.04
LIG1-212ENST00000596549 CCDC144BQ3MJ40 725 aa15.32■□□□□ 0.04
LIG1-212ENST00000596549 CCSAPQ6IQ19 270 aaPredicted RBP15.32■□□□□ 0.04
LIG1-212ENST00000596549 NSMFQ6X4W1 530 aa15.32■□□□□ 0.04
LIG1-212ENST00000596549 CYB5R4Q7L1T6 521 aa15.32■□□□□ 0.04
LIG1-212ENST00000596549 RNF180Q86T96 592 aa15.32■□□□□ 0.04
LIG1-212ENST00000596549 SKAP1Q86WV1 359 aa15.32■□□□□ 0.04
LIG1-212ENST00000596549 KLHDC9Q8NEP7 349 aa15.32■□□□□ 0.04
LIG1-212ENST00000596549 CLEC4DQ8WXI8 215 aa15.32■□□□□ 0.04
LIG1-212ENST00000596549 ANKS1AQ92625 1134 aa15.32■□□□□ 0.04
LIG1-212ENST00000596549 CTNNA3Q9UI47 895 aa15.32■□□□□ 0.04
LIG1-212ENST00000596549 ATP11BQ9Y2G3 1177 aa15.32■□□□□ 0.04
LIG1-212ENST00000596549 WDR19Q8NEZ3 1342 aa15.32■□□□□ 0.04
LIG1-212ENST00000596549 CTAGE5O15320 804 aa15.31■□□□□ 0.04
LIG1-212ENST00000596549 DUSP11O75319 330 aaKnown RBP15.31■□□□□ 0.04
LIG1-212ENST00000596549 PTGS1P23219 599 aa15.31■□□□□ 0.04
LIG1-212ENST00000596549 MDM2Q00987 491 aaPredicted RBP15.31■□□□□ 0.04
LIG1-212ENST00000596549 SEC23AQ15436 765 aa15.31■□□□□ 0.04
LIG1-212ENST00000596549 GPATCH4Q5T3I0 446 aaKnown RBP15.31■□□□□ 0.04
LIG1-212ENST00000596549 C1orf53Q5VUE5 145 aa15.31■□□□□ 0.04
LIG1-212ENST00000596549 KRT23Q9C075 422 aa15.31■□□□□ 0.04
LIG1-212ENST00000596549 UPF3AQ9H1J1 476 aaKnown RBP15.31■□□□□ 0.04
LIG1-212ENST00000596549 KAT14Q9H8E8 782 aa15.31■□□□□ 0.04
LIG1-212ENST00000596549 CNNM2Q9H8M5 875 aa15.31■□□□□ 0.04
LIG1-212ENST00000596549 PDLIM7Q9NR12 457 aa15.31■□□□□ 0.04
LIG1-212ENST00000596549 CST5P28325 142 aaPredicted RBP15.3■□□□□ 0.04
LIG1-212ENST00000596549 STOX1Q6ZVD7 989 aa15.3■□□□□ 0.04
LIG1-212ENST00000596549 FBXO16Q8IX29 292 aaPredicted RBP15.3■□□□□ 0.04
LIG1-212ENST00000596549 MORC4Q8TE76 937 aa15.3■□□□□ 0.04
LIG1-212ENST00000596549 RUFY2Q8WXA3 655 aa15.3■□□□□ 0.04
LIG1-212ENST00000596549 LRCH3Q96II8 777 aa15.3■□□□□ 0.04
LIG1-212ENST00000596549 UBA5Q9GZZ9 404 aa15.3■□□□□ 0.04
LIG1-212ENST00000596549 ASB14A6NK59 587 aa15.29■□□□□ 0.04
LIG1-212ENST00000596549 ALDH5A1P51649 535 aaPredicted RBP15.29■□□□□ 0.04
LIG1-212ENST00000596549 ACLYP53396 1101 aa15.29■□□□□ 0.04
LIG1-212ENST00000596549 GJA9P57773 515 aa15.29■□□□□ 0.04
LIG1-212ENST00000596549 BAATQ14032 418 aaPredicted RBP15.29■□□□□ 0.04
LIG1-212ENST00000596549 CDC37Q16543 378 aaPredicted RBP15.29■□□□□ 0.04
LIG1-212ENST00000596549 CCDC178Q5BJE1 867 aa15.29■□□□□ 0.04
LIG1-212ENST00000596549 TMEM63BQ5T3F8 832 aa15.29■□□□□ 0.04
LIG1-212ENST00000596549 SH3RF1Q7Z6J0 888 aa15.29■□□□□ 0.04
LIG1-212ENST00000596549 TDHQ8IZJ6 230 aa15.29■□□□□ 0.04
LIG1-212ENST00000596549 MOXD2PA6NHM9 499 aa15.28■□□□□ 0.04
LIG1-212ENST00000596549 C6orf222P0C671 652 aaPredicted RBP15.28■□□□□ 0.04
LIG1-212ENST00000596549 NKX3-2P78367 333 aa15.28■□□□□ 0.04
LIG1-212ENST00000596549 KCNA10Q16322 511 aa15.28■□□□□ 0.04
LIG1-212ENST00000596549 USH1GQ495M9 461 aa15.28■□□□□ 0.04
LIG1-212ENST00000596549 ASPRV1Q53RT3 343 aa15.28■□□□□ 0.04
LIG1-212ENST00000596549 TAPT1Q6NXT6 567 aa15.28■□□□□ 0.04
LIG1-212ENST00000596549 EEPD1Q7L9B9 569 aa15.28■□□□□ 0.04
LIG1-212ENST00000596549 UBAC1Q9BSL1 405 aa15.28■□□□□ 0.04
LIG1-212ENST00000596549 TSEN34Q9BSV6 310 aaKnown RBP15.28■□□□□ 0.04
LIG1-212ENST00000596549 UBE2OQ9C0C9 1292 aaKnown RBP15.28■□□□□ 0.04
LIG1-212ENST00000596549 PRDM5Q9NQX1 630 aaPredicted RBP15.28■□□□□ 0.04
LIG1-212ENST00000596549 PDGFCQ9NRA1 345 aa15.28■□□□□ 0.04
LIG1-212ENST00000596549 GNEQ9Y223 722 aaKnown RBP15.28■□□□□ 0.04
LIG1-212ENST00000596549 TANC1Q9C0D5 1861 aa15.27■□□□□ 0.04
LIG1-212ENST00000596549 PTPDC1A2A3K4 754 aa15.27■□□□□ 0.04
LIG1-212ENST00000596549 ASGR1P07306 291 aa15.27■□□□□ 0.04
LIG1-212ENST00000596549 SMPD1P17405 629 aa15.27■□□□□ 0.04
LIG1-212ENST00000596549 RPS6P62753 249 aaKnown RBP15.27■□□□□ 0.04
LIG1-212ENST00000596549 TLE2Q04725 743 aa15.27■□□□□ 0.04
LIG1-212ENST00000596549 IFIT1BQ5T764 474 aaKnown RBP15.27■□□□□ 0.04
LIG1-212ENST00000596549 TLK2Q86UE8 772 aa15.27■□□□□ 0.04
LIG1-212ENST00000596549 ADGRF4Q8IZF3 695 aa15.27■□□□□ 0.04
LIG1-212ENST00000596549 STAG2Q8N3U4 1231 aa15.27■□□□□ 0.04
LIG1-212ENST00000596549 SENP2Q9HC62 589 aa15.27■□□□□ 0.04
LIG1-212ENST00000596549 STARD7Q9NQZ5 370 aa15.27■□□□□ 0.04
LIG1-212ENST00000596549 U3KPZ7 1027 aaPredicted RBP15.27■□□□□ 0.04
LIG1-212ENST00000596549 TRIM43BA6NCK2 446 aa15.26■□□□□ 0.03
LIG1-212ENST00000596549 E7EWF7 191 aa15.26■□□□□ 0.03
LIG1-212ENST00000596549 PARP1P09874 1014 aaKnown RBP15.26■□□□□ 0.03
LIG1-212ENST00000596549 ITGB8P26012 769 aa15.26■□□□□ 0.03
LIG1-212ENST00000596549 CALML3P27482 149 aa15.26■□□□□ 0.03
LIG1-212ENST00000596549 ANTXR2P58335 489 aa15.26■□□□□ 0.03
LIG1-212ENST00000596549 BEX3Q00994 111 aa15.26■□□□□ 0.03
LIG1-212ENST00000596549 TNFAIP2Q03169 654 aa15.26■□□□□ 0.03
LIG1-212ENST00000596549 COL9A3Q14050 684 aaPredicted RBP15.26■□□□□ 0.03
LIG1-212ENST00000596549 SLC35G1Q2M3R5 365 aa15.26■□□□□ 0.03
LIG1-212ENST00000596549 QRICH1Q2TAL8 776 aa15.26■□□□□ 0.03
LIG1-212ENST00000596549 RNF207Q6ZRF8 634 aa15.26■□□□□ 0.03
LIG1-212ENST00000596549 MAP4K1Q92918 833 aa15.26■□□□□ 0.03
LIG1-212ENST00000596549 TRIM43Q96BQ3 446 aaPredicted RBP15.26■□□□□ 0.03
LIG1-212ENST00000596549 VTA1Q9NP79 307 aa15.26■□□□□ 0.03
LIG1-212ENST00000596549 RBM8AQ9Y5S9 174 aaKnown RBP15.26■□□□□ 0.03
LIG1-212ENST00000596549 SCN10AQ9Y5Y9 1956 aa15.25■□□□□ 0.03
LIG1-212ENST00000596549 PQBP1O60828 265 aaKnown RBP15.25■□□□□ 0.03
LIG1-212ENST00000596549 CLTBP09497 229 aa15.25■□□□□ 0.03
LIG1-212ENST00000596549 EDNRBP24530 442 aa15.25■□□□□ 0.03
LIG1-212ENST00000596549 LRIT3Q3SXY7 679 aa15.25■□□□□ 0.03
LIG1-212ENST00000596549 CENPQQ7L2Z9 268 aaPredicted RBP15.25■□□□□ 0.03
LIG1-212ENST00000596549 MB21D2Q8IYB1 491 aaPredicted RBP15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms