RNA–Protein interactions for RNA: ENST00000596445.5

VRK3-211, Transcript of vaccinia related kinase 3, humanhuman

TSL 5

Gene VRK3, Length 840 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-211ENST00000596445 ZSCAN31Q96LW9 406 aaPredicted RBP9.68□□□□□ -0.86
VRK3-211ENST00000596445 AMNQ9BXJ7 453 aa9.68□□□□□ -0.86
VRK3-211ENST00000596445 HOMER2Q9NSB8 354 aa9.68□□□□□ -0.86
VRK3-211ENST00000596445 RNF146Q9NTX7 359 aa9.68□□□□□ -0.86
VRK3-211ENST00000596445 SRRDQ9UH36 339 aa9.68□□□□□ -0.86
VRK3-211ENST00000596445 GJD2Q9UKL4 321 aa9.68□□□□□ -0.86
VRK3-211ENST00000596445 TRIM17Q9Y577 477 aa9.68□□□□□ -0.86
VRK3-211ENST00000596445 PLXNA1Q9UIW2 1896 aa9.68□□□□□ -0.86
VRK3-211ENST00000596445 RBBP6Q7Z6E9 1792 aaKnown RBP9.68□□□□□ -0.86
VRK3-211ENST00000596445 ABCB11O95342 1321 aa9.67□□□□□ -0.86
VRK3-211ENST00000596445 CPLX1O14810 134 aa9.67□□□□□ -0.86
VRK3-211ENST00000596445 PRPF3O43395 683 aaKnown RBP9.67□□□□□ -0.86
VRK3-211ENST00000596445 PPP1R11O60927 126 aaPredicted RBP9.67□□□□□ -0.86
VRK3-211ENST00000596445 MCM2P49736 904 aa9.67□□□□□ -0.86
VRK3-211ENST00000596445 FLT3LGP49771 235 aa9.67□□□□□ -0.86
VRK3-211ENST00000596445 PRKCZQ05513 592 aa9.67□□□□□ -0.86
VRK3-211ENST00000596445 SCRN1Q12765 414 aa9.67□□□□□ -0.86
VRK3-211ENST00000596445 GRB14Q14449 540 aa9.67□□□□□ -0.86
VRK3-211ENST00000596445 KCTD2Q14681 263 aa9.67□□□□□ -0.86
VRK3-211ENST00000596445 PKN2Q16513 984 aaKnown RBP9.67□□□□□ -0.86
VRK3-211ENST00000596445 MUM1L1Q5H9M0 696 aa9.67□□□□□ -0.86
VRK3-211ENST00000596445 CPLX2Q6PUV4 134 aaKnown RBP9.67□□□□□ -0.86
VRK3-211ENST00000596445 CLEC4DQ8WXI8 215 aa9.67□□□□□ -0.86
VRK3-211ENST00000596445 USP6NLQ92738 828 aa9.67□□□□□ -0.86
VRK3-211ENST00000596445 GTF3C6Q969F1 213 aa9.67□□□□□ -0.86
VRK3-211ENST00000596445 MMP19Q99542 508 aa9.67□□□□□ -0.86
VRK3-211ENST00000596445 NUDT12Q9BQG2 462 aa9.67□□□□□ -0.86
VRK3-211ENST00000596445 MAF1Q9H063 256 aa9.67□□□□□ -0.86
VRK3-211ENST00000596445 ACAD9Q9H845 621 aa9.67□□□□□ -0.86
VRK3-211ENST00000596445 SH2B1Q9NRF2 756 aaPredicted RBP9.67□□□□□ -0.86
VRK3-211ENST00000596445 RBM27Q9P2N5 1060 aaKnown RBP9.67□□□□□ -0.86
VRK3-211ENST00000596445 GABRQQ9UN88 632 aa9.67□□□□□ -0.86
VRK3-211ENST00000596445 MRPL11Q9Y3B7 192 aaKnown RBP9.67□□□□□ -0.86
VRK3-211ENST00000596445 PCDHA1Q9Y5I3 950 aa9.67□□□□□ -0.86
VRK3-211ENST00000596445 V9GY48 417 aaPredicted RBP9.67□□□□□ -0.86
VRK3-211ENST00000596445 PFASO15067 1338 aa9.66□□□□□ -0.86
VRK3-211ENST00000596445 hCG_1642624A0A1W2PR95 340 aa9.66□□□□□ -0.86
VRK3-211ENST00000596445 CDKL5O76039 1030 aa9.66□□□□□ -0.86
VRK3-211ENST00000596445 LARGE1O95461 756 aa9.66□□□□□ -0.86
VRK3-211ENST00000596445 XRCC5P13010 732 aaKnown RBP9.66□□□□□ -0.86
VRK3-211ENST00000596445 TAL1P17542 331 aaPredicted RBP9.66□□□□□ -0.86
VRK3-211ENST00000596445 ADORA2AP29274 412 aa9.66□□□□□ -0.86
VRK3-211ENST00000596445 RGS2P41220 211 aa9.66□□□□□ -0.86
VRK3-211ENST00000596445 AKAP17AQ02040 695 aaKnown RBP9.66□□□□□ -0.86
VRK3-211ENST00000596445 MAP2K5Q13163 448 aa9.66□□□□□ -0.86
VRK3-211ENST00000596445 IRF5Q13568 498 aa9.66□□□□□ -0.86
VRK3-211ENST00000596445 TRIM22Q8IYM9 498 aa9.66□□□□□ -0.86
VRK3-211ENST00000596445 ANKRD35Q8N283 1001 aa9.66□□□□□ -0.86
VRK3-211ENST00000596445 NECAB1Q8N987 351 aa9.66□□□□□ -0.86
VRK3-211ENST00000596445 RGS22Q8NE09 1264 aa9.66□□□□□ -0.86
VRK3-211ENST00000596445 PHKBQ93100 1093 aa9.66□□□□□ -0.86
VRK3-211ENST00000596445 RNF26Q9BY78 433 aaPredicted RBP9.66□□□□□ -0.86
VRK3-211ENST00000596445 SLC5A4Q9NY91 659 aa9.66□□□□□ -0.86
VRK3-211ENST00000596445 PTPN22Q9Y2R2 807 aa9.66□□□□□ -0.86
VRK3-211ENST00000596445 LCTP09848 1927 aa9.65□□□□□ -0.86
VRK3-211ENST00000596445 DNAJC25-GNG10A0A024R161 153 aa9.65□□□□□ -0.86
VRK3-211ENST00000596445 hCG_1984214I3L0E3 225 aa9.65□□□□□ -0.86
VRK3-211ENST00000596445 NFIBO00712 420 aa9.65□□□□□ -0.86
VRK3-211ENST00000596445 COBLO75128 1261 aa9.65□□□□□ -0.86
VRK3-211ENST00000596445 CD2BP2O95400 341 aaKnown RBP9.65□□□□□ -0.86
VRK3-211ENST00000596445 HOXC6P09630 235 aa9.65□□□□□ -0.86
VRK3-211ENST00000596445 SCG2P13521 617 aa9.65□□□□□ -0.86
VRK3-211ENST00000596445 SSRP1Q08945 709 aaKnown RBP9.65□□□□□ -0.86
VRK3-211ENST00000596445 PFKFB3Q16875 520 aaPredicted RBP9.65□□□□□ -0.86
VRK3-211ENST00000596445 FBXO46Q6PJ61 603 aaPredicted RBP9.65□□□□□ -0.86
VRK3-211ENST00000596445 NSMFQ6X4W1 530 aa9.65□□□□□ -0.86
VRK3-211ENST00000596445 DPP9Q86TI2 863 aa9.65□□□□□ -0.86
VRK3-211ENST00000596445 MCF2L2Q86YR7 1114 aa9.65□□□□□ -0.86
VRK3-211ENST00000596445 ZNF713Q8N859 430 aaPredicted RBP9.65□□□□□ -0.86
VRK3-211ENST00000596445 RAET1EQ8TD07 263 aa9.65□□□□□ -0.86
VRK3-211ENST00000596445 DDX11Q96FC9 970 aa9.65□□□□□ -0.86
VRK3-211ENST00000596445 APBA2Q99767 749 aa9.65□□□□□ -0.86
VRK3-211ENST00000596445 SLC26A6Q9BXS9 759 aa9.65□□□□□ -0.86
VRK3-211ENST00000596445 A1CFQ9NQ94 594 aaKnown RBP9.65□□□□□ -0.86
VRK3-211ENST00000596445 CYP39A1Q9NYL5 469 aa9.65□□□□□ -0.86
VRK3-211ENST00000596445 BRCA2P51587 3418 aa9.65□□□□□ -0.86
VRK3-211ENST00000596445 PTPDC1A2A3K4 754 aa9.64□□□□□ -0.87
VRK3-211ENST00000596445 OPLAHO14841 1288 aa9.64□□□□□ -0.87
VRK3-211ENST00000596445 ADCY3O60266 1144 aa9.64□□□□□ -0.87
VRK3-211ENST00000596445 DEXIO95424 95 aa9.64□□□□□ -0.87
VRK3-211ENST00000596445 CTDNEP1O95476 244 aa9.64□□□□□ -0.87
VRK3-211ENST00000596445 PGK2P07205 417 aa9.64□□□□□ -0.87
VRK3-211ENST00000596445 CYP2B6P20813 491 aa9.64□□□□□ -0.87
VRK3-211ENST00000596445 RPS6P62753 249 aaKnown RBP9.64□□□□□ -0.87
VRK3-211ENST00000596445 GHRHRQ02643 423 aa9.64□□□□□ -0.87
VRK3-211ENST00000596445 BAATQ14032 418 aaPredicted RBP9.64□□□□□ -0.87
VRK3-211ENST00000596445 PKN1Q16512 942 aa9.64□□□□□ -0.87
VRK3-211ENST00000596445 ZNF792Q3KQV3 632 aa9.64□□□□□ -0.87
VRK3-211ENST00000596445 WWC2Q6AWC2 1192 aa9.64□□□□□ -0.87
VRK3-211ENST00000596445 PPP1R18Q6NYC8 613 aa9.64□□□□□ -0.87
VRK3-211ENST00000596445 RNF207Q6ZRF8 634 aa9.64□□□□□ -0.87
VRK3-211ENST00000596445 HEATR3Q7Z4Q2 680 aa9.64□□□□□ -0.87
VRK3-211ENST00000596445 TRMT44Q8IYL2 757 aaKnown RBP9.64□□□□□ -0.87
VRK3-211ENST00000596445 SAMD3Q8N6K7 520 aa9.64□□□□□ -0.87
VRK3-211ENST00000596445 PXYLP1Q8TE99 480 aa9.64□□□□□ -0.87
VRK3-211ENST00000596445 GPKOWQ92917 476 aaPredicted RBP eCLIP9.64□□□□□ -0.87
VRK3-211ENST00000596445 TMX3Q96JJ7 454 aa9.64□□□□□ -0.87
VRK3-211ENST00000596445 BARHL2Q9NY43 387 aa9.64□□□□□ -0.87
VRK3-211ENST00000596445 MAP3K20Q9NYL2 800 aaKnown RBP9.64□□□□□ -0.87
VRK3-211ENST00000596445 DIS3Q9Y2L1 958 aaKnown RBP9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms