RNA–Protein interactions for RNA: ENST00000595803.5

SHKBP1-209, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-209ENST00000595803 FOXP1Q9H334 677 aaPredicted RBP15□□□□□ -0.01
SHKBP1-209ENST00000595803 C6orf50Q9HD87 102 aa15□□□□□ -0.01
SHKBP1-209ENST00000595803 VCANP13611 3396 aa15□□□□□ -0.01
SHKBP1-209ENST00000595803 A0A1W2PPC1 479 aa14.99□□□□□ -0.01
SHKBP1-209ENST00000595803 SMCO2A6NFE2 343 aa14.99□□□□□ -0.01
SHKBP1-209ENST00000595803 SPDYE5A6NIY4 337 aa14.99□□□□□ -0.01
SHKBP1-209ENST00000595803 BTBD18B2RXH4 712 aa14.99□□□□□ -0.01
SHKBP1-209ENST00000595803 CXCL11O14625 94 aa14.99□□□□□ -0.01
SHKBP1-209ENST00000595803 NCLP19338 710 aaKnown RBP14.99□□□□□ -0.01
SHKBP1-209ENST00000595803 MCM4P33991 863 aa14.99□□□□□ -0.01
SHKBP1-209ENST00000595803 QRICH1Q2TAL8 776 aa14.99□□□□□ -0.01
SHKBP1-209ENST00000595803 SH3D19Q5HYK7 790 aa14.99□□□□□ -0.01
SHKBP1-209ENST00000595803 PRPF38AQ8NAV1 312 aaKnown RBP14.99□□□□□ -0.01
SHKBP1-209ENST00000595803 COA7Q96BR5 231 aa14.99□□□□□ -0.01
SHKBP1-209ENST00000595803 WNK4Q96J92 1243 aa14.99□□□□□ -0.01
SHKBP1-209ENST00000595803 C12orf42Q96LP6 360 aa14.99□□□□□ -0.01
SHKBP1-209ENST00000595803 AMNQ9BXJ7 453 aa14.99□□□□□ -0.01
SHKBP1-209ENST00000595803 TANGO6Q9C0B7 1094 aa14.99□□□□□ -0.01
SHKBP1-209ENST00000595803 RPAP3Q9H6T3 665 aaPredicted RBP14.99□□□□□ -0.01
SHKBP1-209ENST00000595803 CTDP1Q9Y5B0 961 aaPredicted RBP14.99□□□□□ -0.01
SHKBP1-209ENST00000595803 VCAM1P19320 739 aa14.98□□□□□ -0.01
SHKBP1-209ENST00000595803 U2AF2P26368 475 aaKnown RBP eCLIP14.98□□□□□ -0.01
SHKBP1-209ENST00000595803 GNA11P29992 359 aa14.98□□□□□ -0.01
SHKBP1-209ENST00000595803 SNAP25P60880 206 aa14.98□□□□□ -0.01
SHKBP1-209ENST00000595803 KRT85P78386 507 aa14.98□□□□□ -0.01
SHKBP1-209ENST00000595803 DNM1Q05193 864 aaKnown RBP14.98□□□□□ -0.01
SHKBP1-209ENST00000595803 PPIL2Q13356 520 aa14.98□□□□□ -0.01
SHKBP1-209ENST00000595803 CSPP1Q1MSJ5 1256 aa14.98□□□□□ -0.01
SHKBP1-209ENST00000595803 ATL3Q6DD88 541 aa14.98□□□□□ -0.01
SHKBP1-209ENST00000595803 FAM173BQ6P4H8 233 aa14.98□□□□□ -0.01
SHKBP1-209ENST00000595803 FBXO11Q86XK2 927 aa14.98□□□□□ -0.01
SHKBP1-209ENST00000595803 BLIDQ8IZY5 108 aa14.98□□□□□ -0.01
SHKBP1-209ENST00000595803 SH3TC2Q8TF17 1288 aa14.98□□□□□ -0.01
SHKBP1-209ENST00000595803 CNKSR2Q8WXI2 1034 aa14.98□□□□□ -0.01
SHKBP1-209ENST00000595803 SLF1Q9BQI6 1058 aa14.98□□□□□ -0.01
SHKBP1-209ENST00000595803 CFAP45Q9UL16 551 aa14.98□□□□□ -0.01
SHKBP1-209ENST00000595803 PCDHA4Q9UN74 947 aa14.98□□□□□ -0.01
SHKBP1-209ENST00000595803 KIF28PB7ZC32 967 aa14.97□□□□□ -0.01
SHKBP1-209ENST00000595803 USP17L15C9J2P7 530 aa14.97□□□□□ -0.01
SHKBP1-209ENST00000595803 USP17L13C9JLJ4 530 aa14.97□□□□□ -0.01
SHKBP1-209ENST00000595803 USP17L11C9JVI0 530 aa14.97□□□□□ -0.01
SHKBP1-209ENST00000595803 USP17L18D6R9N7 530 aa14.97□□□□□ -0.01
SHKBP1-209ENST00000595803 USP17L22D6RA61 530 aa14.97□□□□□ -0.01
SHKBP1-209ENST00000595803 USP17L17D6RBQ6 530 aa14.97□□□□□ -0.01
SHKBP1-209ENST00000595803 USP17L19D6RCP7 530 aa14.97□□□□□ -0.01
SHKBP1-209ENST00000595803 USP17L20D6RJB6 530 aa14.97□□□□□ -0.01
SHKBP1-209ENST00000595803 ZBED4O75132 1171 aa14.97□□□□□ -0.01
SHKBP1-209ENST00000595803 FLOT1O75955 427 aa14.97□□□□□ -0.01
SHKBP1-209ENST00000595803 USP17L24Q0WX57 530 aa14.97□□□□□ -0.01
SHKBP1-209ENST00000595803 PPP1R18Q6NYC8 613 aa14.97□□□□□ -0.01
SHKBP1-209ENST00000595803 GADL1Q6ZQY3 521 aa14.97□□□□□ -0.01
SHKBP1-209ENST00000595803 BICD2Q8TD16 824 aa14.97□□□□□ -0.01
SHKBP1-209ENST00000595803 OPTNQ96CV9 577 aa14.97□□□□□ -0.01
SHKBP1-209ENST00000595803 CHAMP1Q96JM3 812 aa14.97□□□□□ -0.01
SHKBP1-209ENST00000595803 FBXO28Q9NVF7 368 aa14.97□□□□□ -0.01
SHKBP1-209ENST00000595803 TFIP11Q9UBB9 837 aaKnown RBP14.97□□□□□ -0.01
SHKBP1-209ENST00000595803 PCDHA1Q9Y5I3 950 aa14.97□□□□□ -0.01
SHKBP1-209ENST00000595803 ESYT2A0FGR8 921 aa14.96□□□□□ -0.01
SHKBP1-209ENST00000595803 DDX11L8A8MPP1 907 aa14.96□□□□□ -0.01
SHKBP1-209ENST00000595803 IRF6O14896 467 aa14.96□□□□□ -0.01
SHKBP1-209ENST00000595803 FDX1P10109 184 aa14.96□□□□□ -0.01
SHKBP1-209ENST00000595803 PTMSP20962 102 aa14.96□□□□□ -0.01
SHKBP1-209ENST00000595803 ADCY7P51828 1080 aa14.96□□□□□ -0.01
SHKBP1-209ENST00000595803 MRPL12P52815 198 aaKnown RBP14.96□□□□□ -0.01
SHKBP1-209ENST00000595803 COG2Q14746 738 aa14.96□□□□□ -0.01
SHKBP1-209ENST00000595803 TYW1BQ6NUM6 668 aa14.96□□□□□ -0.01
SHKBP1-209ENST00000595803 CCDC174Q6PII3 467 aa14.96□□□□□ -0.01
SHKBP1-209ENST00000595803 CATSPERGQ6ZRH7 1159 aa14.96□□□□□ -0.01
SHKBP1-209ENST00000595803 NOSTRINQ8IVI9 506 aa14.96□□□□□ -0.01
SHKBP1-209ENST00000595803 OXER1Q8TDS5 423 aa14.96□□□□□ -0.01
SHKBP1-209ENST00000595803 ZMYND12Q9H0C1 365 aa14.96□□□□□ -0.01
SHKBP1-209ENST00000595803 GLT8D2Q9H1C3 349 aa14.96□□□□□ -0.01
SHKBP1-209ENST00000595803 RANBP17Q9H2T7 1088 aaKnown RBP14.96□□□□□ -0.01
SHKBP1-209ENST00000595803 HOXC10Q9NYD6 342 aa14.96□□□□□ -0.01
SHKBP1-209ENST00000595803 CNPY2Q9Y2B0 182 aa14.96□□□□□ -0.01
SHKBP1-209ENST00000595803 ZSWIM8A7E2V4 1837 aa14.95□□□□□ -0.02
SHKBP1-209ENST00000595803 PPP1R11O60927 126 aaPredicted RBP14.95□□□□□ -0.02
SHKBP1-209ENST00000595803 PRPF40AO75400 957 aaKnown RBP14.95□□□□□ -0.02
SHKBP1-209ENST00000595803 GJA5P36382 358 aa14.95□□□□□ -0.02
SHKBP1-209ENST00000595803 NR5A1Q13285 461 aa14.95□□□□□ -0.02
SHKBP1-209ENST00000595803 MYSM1Q5VVJ2 828 aa14.95□□□□□ -0.02
SHKBP1-209ENST00000595803 FASTKD5Q7L8L6 764 aaKnown RBP14.95□□□□□ -0.02
SHKBP1-209ENST00000595803 DEFB123Q8N688 67 aa14.95□□□□□ -0.02
SHKBP1-209ENST00000595803 DAGLBQ8NCG7 672 aa14.95□□□□□ -0.02
SHKBP1-209ENST00000595803 PTPN18Q99952 460 aa14.95□□□□□ -0.02
SHKBP1-209ENST00000595803 HTATIP2Q9BUP3 242 aa14.95□□□□□ -0.02
SHKBP1-209ENST00000595803 SCAND2PQ9GZW5 306 aaPredicted RBP14.95□□□□□ -0.02
SHKBP1-209ENST00000595803 PNMA2Q9UL42 364 aa14.95□□□□□ -0.02
SHKBP1-209ENST00000595803 PPP1R9AQ9ULJ8 1098 aa14.95□□□□□ -0.02
SHKBP1-209ENST00000595803 NOL7Q9UMY1 257 aaKnown RBP14.95□□□□□ -0.02
SHKBP1-209ENST00000595803 KCNH4Q9UQ05 1017 aa14.95□□□□□ -0.02
SHKBP1-209ENST00000595803 STXBP5LQ9Y2K9 1186 aa14.95□□□□□ -0.02
SHKBP1-209ENST00000595803 SPTBN5Q9NRC6 3674 aaKnown RBP14.95□□□□□ -0.02
SHKBP1-209ENST00000595803 A0A0G2JLL6 359 aaPredicted RBP14.94□□□□□ -0.02
SHKBP1-209ENST00000595803 CCDC194A0A1B0GVG4 234 aa14.94□□□□□ -0.02
SHKBP1-209ENST00000595803 DSG3P32926 999 aa14.94□□□□□ -0.02
SHKBP1-209ENST00000595803 CEBPZQ03701 1054 aaKnown RBP14.94□□□□□ -0.02
SHKBP1-209ENST00000595803 SNAPC2Q13487 334 aa14.94□□□□□ -0.02
SHKBP1-209ENST00000595803 ARHGEF6Q15052 776 aa14.94□□□□□ -0.02
SHKBP1-209ENST00000595803 USH1GQ495M9 461 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 105.3 ms