RNA–Protein interactions for RNA: ENST00000595495.1

SIPA1L3-205, Transcript of signal induced proliferation associated 1 like 3, humanhuman

TSL 4

Gene SIPA1L3, Length 584 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1L3-205ENST00000595495 DDX11Q96FC9 970 aa16.69■□□□□ 0.26
SIPA1L3-205ENST00000595495 MAML3Q96JK9 1138 aa16.69■□□□□ 0.26
SIPA1L3-205ENST00000595495 LZTS2Q9BRK4 669 aa16.69■□□□□ 0.26
SIPA1L3-205ENST00000595495 SPZ1Q9BXG8 430 aa16.69■□□□□ 0.26
SIPA1L3-205ENST00000595495 UPF3BQ9BZI7 483 aaKnown RBP16.69■□□□□ 0.26
SIPA1L3-205ENST00000595495 DIS3Q9Y2L1 958 aaKnown RBP16.69■□□□□ 0.26
SIPA1L3-205ENST00000595495 PFASO15067 1338 aa16.69■□□□□ 0.26
SIPA1L3-205ENST00000595495 NFIBO00712 420 aa16.68■□□□□ 0.26
SIPA1L3-205ENST00000595495 ZBTB5O15062 677 aa16.68■□□□□ 0.26
SIPA1L3-205ENST00000595495 ZBTB43O43298 467 aa16.68■□□□□ 0.26
SIPA1L3-205ENST00000595495 PLEKHA8P1O95397 391 aa16.68■□□□□ 0.26
SIPA1L3-205ENST00000595495 CCL5P13501 91 aa16.68■□□□□ 0.26
SIPA1L3-205ENST00000595495 PRKAR2AP13861 404 aaKnown RBP16.68■□□□□ 0.26
SIPA1L3-205ENST00000595495 SOX10P56693 466 aa16.68■□□□□ 0.26
SIPA1L3-205ENST00000595495 MFSD14CQ5VZR4 134 aa16.68■□□□□ 0.26
SIPA1L3-205ENST00000595495 FBXO11Q86XK2 927 aa16.68■□□□□ 0.26
SIPA1L3-205ENST00000595495 HOMER1Q86YM7 354 aa16.68■□□□□ 0.26
SIPA1L3-205ENST00000595495 CLEC4DQ8WXI8 215 aa16.68■□□□□ 0.26
SIPA1L3-205ENST00000595495 UNC93B1Q9H1C4 597 aa16.68■□□□□ 0.26
SIPA1L3-205ENST00000595495 ABCB11O95342 1321 aa16.68■□□□□ 0.26
SIPA1L3-205ENST00000595495 GOLGA8BA8MQT2 603 aa16.67■□□□□ 0.26
SIPA1L3-205ENST00000595495 PPP1R11O60927 126 aaPredicted RBP16.67■□□□□ 0.26
SIPA1L3-205ENST00000595495 SMARCA1P28370 1054 aa16.67■□□□□ 0.26
SIPA1L3-205ENST00000595495 CYP2C19P33261 490 aa16.67■□□□□ 0.26
SIPA1L3-205ENST00000595495 CACNB2Q08289 660 aaPredicted RBP16.67■□□□□ 0.26
SIPA1L3-205ENST00000595495 APOBRQ0VD83 1088 aa16.67■□□□□ 0.26
SIPA1L3-205ENST00000595495 NSMFQ6X4W1 530 aa16.67■□□□□ 0.26
SIPA1L3-205ENST00000595495 TMTC3Q6ZXV5 915 aa16.67■□□□□ 0.26
SIPA1L3-205ENST00000595495 PIGSQ96S52 555 aa16.67■□□□□ 0.26
SIPA1L3-205ENST00000595495 TMEM106CQ9BVX2 250 aa16.67■□□□□ 0.26
SIPA1L3-205ENST00000595495 AMNQ9BXJ7 453 aa16.67■□□□□ 0.26
SIPA1L3-205ENST00000595495 CYP39A1Q9NYL5 469 aa16.67■□□□□ 0.26
SIPA1L3-205ENST00000595495 NID2Q14112 1375 aa16.66■□□□□ 0.26
SIPA1L3-205ENST00000595495 GOLGA8AA7E2F4 631 aa16.66■□□□□ 0.26
SIPA1L3-205ENST00000595495 POTEB2H3BUK9 544 aa16.66■□□□□ 0.26
SIPA1L3-205ENST00000595495 RTN1Q16799 776 aa16.66■□□□□ 0.26
SIPA1L3-205ENST00000595495 ZNF467Q7Z7K2 595 aaPredicted RBP16.66■□□□□ 0.26
SIPA1L3-205ENST00000595495 SRBD1Q8N5C6 995 aaKnown RBP16.66■□□□□ 0.26
SIPA1L3-205ENST00000595495 FAM133AQ8N9E0 248 aa16.66■□□□□ 0.26
SIPA1L3-205ENST00000595495 FGD4Q96M96 766 aa16.66■□□□□ 0.26
SIPA1L3-205ENST00000595495 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.66■□□□□ 0.26
SIPA1L3-205ENST00000595495 RNF208Q9H0X6 261 aa16.66■□□□□ 0.26
SIPA1L3-205ENST00000595495 PAK6Q9NQU5 681 aaPredicted RBP16.66■□□□□ 0.26
SIPA1L3-205ENST00000595495 RBM28Q9NW13 759 aaKnown RBP16.66■□□□□ 0.26
SIPA1L3-205ENST00000595495 RPTORQ8N122 1335 aa16.66■□□□□ 0.26
SIPA1L3-205ENST00000595495 RBBP6Q7Z6E9 1792 aaKnown RBP16.65■□□□□ 0.26
SIPA1L3-205ENST00000595495 PNMA6FA0A0J9YX94 578 aa16.65■□□□□ 0.26
SIPA1L3-205ENST00000595495 POTEFA5A3E0 1075 aa16.65■□□□□ 0.26
SIPA1L3-205ENST00000595495 EVCP57679 992 aa16.65■□□□□ 0.26
SIPA1L3-205ENST00000595495 CNTN2Q02246 1040 aa16.65■□□□□ 0.26
SIPA1L3-205ENST00000595495 TOB2Q14106 344 aaPredicted RBP16.65■□□□□ 0.26
SIPA1L3-205ENST00000595495 CMTR1Q8N1G2 835 aaKnown RBP16.65■□□□□ 0.26
SIPA1L3-205ENST00000595495 MSL3Q8N5Y2 521 aaKnown RBP16.65■□□□□ 0.26
SIPA1L3-205ENST00000595495 RRP36Q96EU6 259 aaKnown RBP16.65■□□□□ 0.26
SIPA1L3-205ENST00000595495 TINF2Q9BSI4 451 aa16.65■□□□□ 0.26
SIPA1L3-205ENST00000595495 HMX1Q9NP08 348 aaPredicted RBP16.65■□□□□ 0.26
SIPA1L3-205ENST00000595495 NAP1L2Q9ULW6 460 aaPredicted RBP16.65■□□□□ 0.26
SIPA1L3-205ENST00000595495 MRPL11Q9Y3B7 192 aaKnown RBP16.65■□□□□ 0.26
SIPA1L3-205ENST00000595495 BRCA2P51587 3418 aa16.65■□□□□ 0.26
SIPA1L3-205ENST00000595495 PTPDC1A2A3K4 754 aa16.64■□□□□ 0.25
SIPA1L3-205ENST00000595495 GJB1P08034 283 aa16.64■□□□□ 0.25
SIPA1L3-205ENST00000595495 CYBAP13498 195 aa16.64■□□□□ 0.25
SIPA1L3-205ENST00000595495 METAP2P50579 478 aaKnown RBP eCLIP16.64■□□□□ 0.25
SIPA1L3-205ENST00000595495 TRAF1Q13077 416 aa16.64■□□□□ 0.25
SIPA1L3-205ENST00000595495 BAATQ14032 418 aaPredicted RBP16.64■□□□□ 0.25
SIPA1L3-205ENST00000595495 MAMDC4Q6UXC1 1216 aa16.64■□□□□ 0.25
SIPA1L3-205ENST00000595495 SLC30A10Q6XR72 485 aa16.64■□□□□ 0.25
SIPA1L3-205ENST00000595495 RNF207Q6ZRF8 634 aa16.64■□□□□ 0.25
SIPA1L3-205ENST00000595495 RGS22Q8NE09 1264 aa16.64■□□□□ 0.25
SIPA1L3-205ENST00000595495 PIBF1Q8WXW3 757 aa16.64■□□□□ 0.25
SIPA1L3-205ENST00000595495 FAM217BQ9NTX9 383 aaPredicted RBP16.64■□□□□ 0.25
SIPA1L3-205ENST00000595495 PDRG1Q9NUG6 133 aa16.64■□□□□ 0.25
SIPA1L3-205ENST00000595495 SEC63Q9UGP8 760 aaKnown RBP16.64■□□□□ 0.25
SIPA1L3-205ENST00000595495 PCDHA1Q9Y5I3 950 aa16.64■□□□□ 0.25
SIPA1L3-205ENST00000595495 CNTNAP5Q8WYK1 1306 aa16.64■□□□□ 0.25
SIPA1L3-205ENST00000595495 SYNGAP1Q96PV0 1343 aa16.64■□□□□ 0.25
SIPA1L3-205ENST00000595495 SOWAHBA6NEL2 793 aa16.63■□□□□ 0.25
SIPA1L3-205ENST00000595495 CCND3P30281 292 aaPredicted RBP16.63■□□□□ 0.25
SIPA1L3-205ENST00000595495 RPS6P62753 249 aaKnown RBP16.63■□□□□ 0.25
SIPA1L3-205ENST00000595495 FUT2Q10981 343 aa16.63■□□□□ 0.25
SIPA1L3-205ENST00000595495 PPP2R5BQ15173 497 aa16.63■□□□□ 0.25
SIPA1L3-205ENST00000595495 TRPV1Q8NER1 839 aa16.63■□□□□ 0.25
SIPA1L3-205ENST00000595495 MAF1Q9H063 256 aa16.63■□□□□ 0.25
SIPA1L3-205ENST00000595495 NRBP1Q9UHY1 535 aa16.63■□□□□ 0.25
SIPA1L3-205ENST00000595495 ASTN1O14525 1302 aa16.63■□□□□ 0.25
SIPA1L3-205ENST00000595495 PLXNA1Q9UIW2 1896 aa16.63■□□□□ 0.25
SIPA1L3-205ENST00000595495 SMCHD1A6NHR9 2005 aa16.62■□□□□ 0.25
SIPA1L3-205ENST00000595495 CCDC196A0A1B0GTZ2 297 aa16.62■□□□□ 0.25
SIPA1L3-205ENST00000595495 OPLAHO14841 1288 aa16.62■□□□□ 0.25
SIPA1L3-205ENST00000595495 CALML3P27482 149 aa16.62■□□□□ 0.25
SIPA1L3-205ENST00000595495 CDC27P30260 824 aa16.62■□□□□ 0.25
SIPA1L3-205ENST00000595495 GJA8P48165 433 aa16.62■□□□□ 0.25
SIPA1L3-205ENST00000595495 MCF2L2Q86YR7 1114 aa16.62■□□□□ 0.25
SIPA1L3-205ENST00000595495 CCDC82Q8N4S0 544 aa16.62■□□□□ 0.25
SIPA1L3-205ENST00000595495 U2AF1L4Q8WU68 220 aaKnown RBP16.62■□□□□ 0.25
SIPA1L3-205ENST00000595495 DEFB118Q96PH6 123 aa16.62■□□□□ 0.25
SIPA1L3-205ENST00000595495 ZNFX1Q9P2E3 1918 aaKnown RBP16.62■□□□□ 0.25
SIPA1L3-205ENST00000595495 KIAA0100Q14667 2235 aaKnown RBP16.61■□□□□ 0.25
SIPA1L3-205ENST00000595495 PDIA3P30101 505 aaKnown RBP16.61■□□□□ 0.25
SIPA1L3-205ENST00000595495 ADD1P35611 737 aaKnown RBP16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms