RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 ANKS1AQ92625 1134 aa27.54■■■□□ 2
LSM4-204ENST00000594828 KAT14Q9H8E8 782 aa27.54■■■□□ 2
LSM4-204ENST00000594828 CNNM2Q9H8M5 875 aa27.54■■■□□ 2
LSM4-204ENST00000594828 SPC25Q9HBM1 224 aa27.54■■■□□ 2
LSM4-204ENST00000594828 RAD50Q92878 1312 aa27.53■■■□□ 2
LSM4-204ENST00000594828 ADCY6O43306 1168 aa27.53■■■□□ 2
LSM4-204ENST00000594828 ACLYP53396 1101 aa27.53■■■□□ 2
LSM4-204ENST00000594828 KCNA10Q16322 511 aa27.53■■■□□ 2
LSM4-204ENST00000594828 PNMA1Q8ND90 353 aa27.53■■■□□ 2
LSM4-204ENST00000594828 PRDM5Q9NQX1 630 aaPredicted RBP27.53■■■□□ 2
LSM4-204ENST00000594828 DNAH12Q6ZR08 3092 aa27.52■■■□□ 2
LSM4-204ENST00000594828 MCM3APO60318 1980 aa27.52■■■□□ 2
LSM4-204ENST00000594828 MOXD2PA6NHM9 499 aa27.52■■■□□ 2
LSM4-204ENST00000594828 C6orf222P0C671 652 aaPredicted RBP27.52■■■□□ 2
LSM4-204ENST00000594828 GOLGA8HP0CJ92 632 aa27.52■■■□□ 2
LSM4-204ENST00000594828 CHMLP26374 656 aa27.52■■■□□ 2
LSM4-204ENST00000594828 TLE2Q04725 743 aa27.52■■■□□ 2
LSM4-204ENST00000594828 BAATQ14032 418 aaPredicted RBP27.52■■■□□ 2
LSM4-204ENST00000594828 CCSAPQ6IQ19 270 aaPredicted RBP27.52■■■□□ 2
LSM4-204ENST00000594828 NUP133Q8WUM0 1156 aa27.52■■■□□ 2
LSM4-204ENST00000594828 ASTN1O14525 1302 aa27.51■■□□□ 1.99
LSM4-204ENST00000594828 MYADML2A6NDP7 307 aa27.51■■□□□ 1.99
LSM4-204ENST00000594828 NFIBO00712 420 aa27.51■■□□□ 1.99
LSM4-204ENST00000594828 CST5P28325 142 aaPredicted RBP27.51■■□□□ 1.99
LSM4-204ENST00000594828 GJA9P57773 515 aa27.51■■□□□ 1.99
LSM4-204ENST00000594828 TNFAIP2Q03169 654 aa27.51■■□□□ 1.99
LSM4-204ENST00000594828 ENAHQ8N8S7 591 aaPredicted RBP27.51■■□□□ 1.99
LSM4-204ENST00000594828 PCSK9Q8NBP7 692 aaKnown RBP27.51■■□□□ 1.99
LSM4-204ENST00000594828 LRCH3Q96II8 777 aa27.51■■□□□ 1.99
LSM4-204ENST00000594828 PURBQ96QR8 312 aaKnown RBP27.51■■□□□ 1.99
LSM4-204ENST00000594828 STARD7Q9NQZ5 370 aa27.51■■□□□ 1.99
LSM4-204ENST00000594828 TNKSO95271 1327 aa27.5■■□□□ 1.99
LSM4-204ENST00000594828 LRIT3Q3SXY7 679 aa27.5■■□□□ 1.99
LSM4-204ENST00000594828 NOL8Q76FK4 1167 aaKnown RBP27.5■■□□□ 1.99
LSM4-204ENST00000594828 UBAC1Q9BSL1 405 aa27.5■■□□□ 1.99
LSM4-204ENST00000594828 UBA5Q9GZZ9 404 aa27.5■■□□□ 1.99
LSM4-204ENST00000594828 UPF3AQ9H1J1 476 aaKnown RBP27.5■■□□□ 1.99
LSM4-204ENST00000594828 PDLIM7Q9NR12 457 aa27.5■■□□□ 1.99
LSM4-204ENST00000594828 ADD3Q9UEY8 706 aaKnown RBP27.5■■□□□ 1.99
LSM4-204ENST00000594828 WDR19Q8NEZ3 1342 aa27.49■■□□□ 1.99
LSM4-204ENST00000594828 PTPDC1A2A3K4 754 aa27.49■■□□□ 1.99
LSM4-204ENST00000594828 IRX5P78411 483 aaPredicted RBP27.49■■□□□ 1.99
LSM4-204ENST00000594828 GNASQ5JWF2 1037 aa27.49■■□□□ 1.99
LSM4-204ENST00000594828 CLEC4DQ8WXI8 215 aa27.49■■□□□ 1.99
LSM4-204ENST00000594828 DDX49Q9Y6V7 483 aaKnown RBP27.49■■□□□ 1.99
LSM4-204ENST00000594828 C11orf97A0A1B0GVM6 126 aaPredicted RBP27.48■■□□□ 1.99
LSM4-204ENST00000594828 EEPD1Q7L9B9 569 aa27.48■■□□□ 1.99
LSM4-204ENST00000594828 SH3RF1Q7Z6J0 888 aa27.48■■□□□ 1.99
LSM4-204ENST00000594828 GLT1D1Q96MS3 346 aa27.48■■□□□ 1.99
LSM4-204ENST00000594828 CPVLQ9H3G5 476 aa27.48■■□□□ 1.99
LSM4-204ENST00000594828 TRIM43BA6NCK2 446 aa27.47■■□□□ 1.99
LSM4-204ENST00000594828 PQBP1O60828 265 aaKnown RBP27.47■■□□□ 1.99
LSM4-204ENST00000594828 ASGR1P07306 291 aa27.47■■□□□ 1.99
LSM4-204ENST00000594828 PTH1RQ03431 593 aa27.47■■□□□ 1.99
LSM4-204ENST00000594828 ASPRV1Q53RT3 343 aa27.47■■□□□ 1.99
LSM4-204ENST00000594828 IQSEC1Q6DN90 963 aa27.47■■□□□ 1.99
LSM4-204ENST00000594828 RNF207Q6ZRF8 634 aa27.47■■□□□ 1.99
LSM4-204ENST00000594828 MORC4Q8TE76 937 aa27.47■■□□□ 1.99
LSM4-204ENST00000594828 TRIM43Q96BQ3 446 aaPredicted RBP27.47■■□□□ 1.99
LSM4-204ENST00000594828 U3KPZ7 1027 aaPredicted RBP27.47■■□□□ 1.99
LSM4-204ENST00000594828 CLTBP09497 229 aa27.46■■□□□ 1.99
LSM4-204ENST00000594828 CALML3P27482 149 aa27.46■■□□□ 1.99
LSM4-204ENST00000594828 NKX3-2P78367 333 aa27.46■■□□□ 1.99
LSM4-204ENST00000594828 TRDNQ13061 729 aa27.46■■□□□ 1.99
LSM4-204ENST00000594828 IFIT1BQ5T764 474 aaKnown RBP27.46■■□□□ 1.99
LSM4-204ENST00000594828 TAPT1Q6NXT6 567 aa27.46■■□□□ 1.99
LSM4-204ENST00000594828 FBXO16Q8IX29 292 aaPredicted RBP27.46■■□□□ 1.99
LSM4-204ENST00000594828 BADQ92934 168 aa27.46■■□□□ 1.99
LSM4-204ENST00000594828 VTI1AQ96AJ9 217 aa27.46■■□□□ 1.99
LSM4-204ENST00000594828 PDGFCQ9NRA1 345 aa27.46■■□□□ 1.99
LSM4-204ENST00000594828 GNEQ9Y223 722 aaKnown RBP27.46■■□□□ 1.99
LSM4-204ENST00000594828 ELP1O95163 1332 aa27.45■■□□□ 1.99
LSM4-204ENST00000594828 LOC102724159A0A0B4J2E5 919 aa27.45■■□□□ 1.98
LSM4-204ENST00000594828 PARP1P09874 1014 aaKnown RBP27.45■■□□□ 1.98
LSM4-204ENST00000594828 ALDH5A1P51649 535 aaPredicted RBP27.45■■□□□ 1.98
LSM4-204ENST00000594828 PWP2Q15269 919 aaKnown RBP27.45■■□□□ 1.98
LSM4-204ENST00000594828 USH1GQ495M9 461 aa27.45■■□□□ 1.98
LSM4-204ENST00000594828 SLC30A10Q6XR72 485 aa27.45■■□□□ 1.98
LSM4-204ENST00000594828 ANKRD33Q7Z3H0 272 aa27.45■■□□□ 1.98
LSM4-204ENST00000594828 TOX2Q96NM4 488 aa27.45■■□□□ 1.98
LSM4-204ENST00000594828 VTA1Q9NP79 307 aa27.45■■□□□ 1.98
LSM4-204ENST00000594828 DCDC2CA8MYV0 355 aa27.44■■□□□ 1.98
LSM4-204ENST00000594828 CTAGE5O15320 804 aa27.44■■□□□ 1.98
LSM4-204ENST00000594828 SGSM2O43147 1006 aa27.44■■□□□ 1.98
LSM4-204ENST00000594828 CYP21A2P08686 494 aa27.44■■□□□ 1.98
LSM4-204ENST00000594828 SMPD1P17405 629 aa27.44■■□□□ 1.98
LSM4-204ENST00000594828 RPS6P62753 249 aaKnown RBP27.44■■□□□ 1.98
LSM4-204ENST00000594828 ADGRF4Q8IZF3 695 aa27.44■■□□□ 1.98
LSM4-204ENST00000594828 AP5M1Q9H0R1 490 aa27.44■■□□□ 1.98
LSM4-204ENST00000594828 BEX3Q00994 111 aa27.43■■□□□ 1.98
LSM4-204ENST00000594828 CDC37Q16543 378 aaPredicted RBP27.43■■□□□ 1.98
LSM4-204ENST00000594828 GPR153Q6NV75 609 aa27.43■■□□□ 1.98
LSM4-204ENST00000594828 KIAA1211Q6ZU35 1233 aa27.43■■□□□ 1.98
LSM4-204ENST00000594828 CYB5R4Q7L1T6 521 aa27.43■■□□□ 1.98
LSM4-204ENST00000594828 TLK2Q86UE8 772 aa27.43■■□□□ 1.98
LSM4-204ENST00000594828 TMEM39AQ9NV64 488 aa27.43■■□□□ 1.98
LSM4-204ENST00000594828 KIAA0355O15063 1070 aa27.42■■□□□ 1.98
LSM4-204ENST00000594828 DYNC1LI2O43237 492 aaPredicted RBP27.42■■□□□ 1.98
LSM4-204ENST00000594828 DHX16O60231 1041 aaKnown RBP27.42■■□□□ 1.98
LSM4-204ENST00000594828 FAAP100Q0VG06 881 aa27.42■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms