RNA–Protein interactions for RNA: ENST00000594399.1

USE1-204, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2

Gene USE1, Length 613 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-204ENST00000594399 LARP1BQ659C4 914 aaKnown RBP12.49□□□□□ -0.41
USE1-204ENST00000594399 SNRNP48Q6IEG0 339 aaKnown RBP12.49□□□□□ -0.41
USE1-204ENST00000594399 COA7Q96BR5 231 aa12.49□□□□□ -0.41
USE1-204ENST00000594399 AGBL1Q96MI9 1066 aa12.49□□□□□ -0.41
USE1-204ENST00000594399 BTBD7Q9P203 1132 aa12.49□□□□□ -0.41
USE1-204ENST00000594399 ESYT2A0FGR8 921 aa12.48□□□□□ -0.41
USE1-204ENST00000594399 H3BQV1 296 aa12.48□□□□□ -0.41
USE1-204ENST00000594399 CNMDO75829 334 aa12.48□□□□□ -0.41
USE1-204ENST00000594399 TAL1P17542 331 aaPredicted RBP12.48□□□□□ -0.41
USE1-204ENST00000594399 COPB2P35606 906 aa12.48□□□□□ -0.41
USE1-204ENST00000594399 ERVK-9P63128 1117 aa12.48□□□□□ -0.41
USE1-204ENST00000594399 ERVK-24P63145 666 aa12.48□□□□□ -0.41
USE1-204ENST00000594399 TKFCQ3LXA3 575 aa12.48□□□□□ -0.41
USE1-204ENST00000594399 TYW1BQ6NUM6 668 aa12.48□□□□□ -0.41
USE1-204ENST00000594399 POTEEQ6S8J3 1075 aa12.48□□□□□ -0.41
USE1-204ENST00000594399 RGS22Q8NE09 1264 aa12.48□□□□□ -0.41
USE1-204ENST00000594399 SHISA4Q96DD7 197 aa12.48□□□□□ -0.41
USE1-204ENST00000594399 SPATC1LQ9H0A9 340 aa12.48□□□□□ -0.41
USE1-204ENST00000594399 ZFYVE28Q9HCC9 887 aa12.48□□□□□ -0.41
USE1-204ENST00000594399 TXNRD2Q9NNW7 524 aa12.48□□□□□ -0.41
USE1-204ENST00000594399 RBPJLQ9UBG7 517 aa12.48□□□□□ -0.41
USE1-204ENST00000594399 MORF4L1Q9UBU8 362 aa12.48□□□□□ -0.41
USE1-204ENST00000594399 MRPL11Q9Y3B7 192 aaKnown RBP12.48□□□□□ -0.41
USE1-204ENST00000594399 CASP8AP2Q9UKL3 1982 aa12.47□□□□□ -0.41
USE1-204ENST00000594399 VPS37CA5D8V6 355 aaPredicted RBP12.47□□□□□ -0.41
USE1-204ENST00000594399 ALAS1P13196 640 aa12.47□□□□□ -0.41
USE1-204ENST00000594399 PDIA4P13667 645 aaKnown RBP12.47□□□□□ -0.41
USE1-204ENST00000594399 SYT1P21579 422 aa12.47□□□□□ -0.41
USE1-204ENST00000594399 CALML3P27482 149 aa12.47□□□□□ -0.41
USE1-204ENST00000594399 STAT3P40763 770 aa12.47□□□□□ -0.41
USE1-204ENST00000594399 ADCY7P51828 1080 aa12.47□□□□□ -0.41
USE1-204ENST00000594399 NLRP5P59047 1200 aa12.47□□□□□ -0.41
USE1-204ENST00000594399 GUCY1B3Q02153 619 aa12.47□□□□□ -0.41
USE1-204ENST00000594399 FAM110CQ1W6H9 321 aa12.47□□□□□ -0.41
USE1-204ENST00000594399 KRT40Q6A162 431 aa12.47□□□□□ -0.41
USE1-204ENST00000594399 RIOX2Q8IUF8 465 aa12.47□□□□□ -0.41
USE1-204ENST00000594399 FBXO18Q8NFZ0 1043 aa12.47□□□□□ -0.41
USE1-204ENST00000594399 PHF20Q9BVI0 1012 aa12.47□□□□□ -0.41
USE1-204ENST00000594399 ZMYND12Q9H0C1 365 aa12.47□□□□□ -0.41
USE1-204ENST00000594399 BRMS1Q9HCU9 246 aa12.47□□□□□ -0.41
USE1-204ENST00000594399 GJB4Q9NTQ9 266 aa12.47□□□□□ -0.41
USE1-204ENST00000594399 RNF146Q9NTX7 359 aa12.47□□□□□ -0.41
USE1-204ENST00000594399 KCNJ14Q9UNX9 436 aa12.47□□□□□ -0.41
USE1-204ENST00000594399 STX6O43752 255 aa12.46□□□□□ -0.41
USE1-204ENST00000594399 TLR2O60603 784 aa12.46□□□□□ -0.41
USE1-204ENST00000594399 PEX10O60683 326 aa12.46□□□□□ -0.41
USE1-204ENST00000594399 SLC25A27O95847 323 aa12.46□□□□□ -0.41
USE1-204ENST00000594399 MMP1P03956 469 aa12.46□□□□□ -0.41
USE1-204ENST00000594399 GNA11P29992 359 aa12.46□□□□□ -0.41
USE1-204ENST00000594399 DDIT3P35638 169 aa12.46□□□□□ -0.41
USE1-204ENST00000594399 CCNA1P78396 465 aa12.46□□□□□ -0.41
USE1-204ENST00000594399 CRHR2Q13324 411 aa12.46□□□□□ -0.41
USE1-204ENST00000594399 SAFBQ15424 915 aaKnown RBP eCLIP12.46□□□□□ -0.41
USE1-204ENST00000594399 GALNT17Q6IS24 598 aa12.46□□□□□ -0.41
USE1-204ENST00000594399 TEX2Q8IWB9 1127 aa12.46□□□□□ -0.41
USE1-204ENST00000594399 ANKRD13CQ8N6S4 541 aa12.46□□□□□ -0.41
USE1-204ENST00000594399 DAGLBQ8NCG7 672 aa12.46□□□□□ -0.41
USE1-204ENST00000594399 GPRC5AQ8NFJ5 357 aa12.46□□□□□ -0.41
USE1-204ENST00000594399 CUL5Q93034 780 aa12.46□□□□□ -0.41
USE1-204ENST00000594399 TRERF1Q96PN7 1200 aa12.46□□□□□ -0.41
USE1-204ENST00000594399 MOV10L1Q9BXT6 1211 aaKnown RBP12.46□□□□□ -0.41
USE1-204ENST00000594399 GLT8D2Q9H1C3 349 aa12.46□□□□□ -0.41
USE1-204ENST00000594399 C6orf50Q9HD87 102 aa12.46□□□□□ -0.41
USE1-204ENST00000594399 HOMER2Q9NSB8 354 aa12.46□□□□□ -0.41
USE1-204ENST00000594399 SMCO2A6NFE2 343 aa12.45□□□□□ -0.42
USE1-204ENST00000594399 BCRP11274 1271 aa12.45□□□□□ -0.42
USE1-204ENST00000594399 KRT2P35908 639 aa12.45□□□□□ -0.42
USE1-204ENST00000594399 NCAPG2Q86XI2 1143 aa12.45□□□□□ -0.42
USE1-204ENST00000594399 DIS3L2Q8IYB7 885 aaKnown RBP12.45□□□□□ -0.42
USE1-204ENST00000594399 BLIDQ8IZY5 108 aa12.45□□□□□ -0.42
USE1-204ENST00000594399 SHCBP1Q8NEM2 672 aa12.45□□□□□ -0.42
USE1-204ENST00000594399 CHST13Q8NET6 341 aa12.45□□□□□ -0.42
USE1-204ENST00000594399 BICD2Q8TD16 824 aa12.45□□□□□ -0.42
USE1-204ENST00000594399 CLEC4DQ8WXI8 215 aa12.45□□□□□ -0.42
USE1-204ENST00000594399 ACAD9Q9H845 621 aa12.45□□□□□ -0.42
USE1-204ENST00000594399 PSTPIP2Q9H939 334 aa12.45□□□□□ -0.42
USE1-204ENST00000594399 RIC8AQ9NPQ8 531 aa12.45□□□□□ -0.42
USE1-204ENST00000594399 FBXO40Q9UH90 709 aa12.45□□□□□ -0.42
USE1-204ENST00000594399 CPA4Q9UI42 421 aa12.45□□□□□ -0.42
USE1-204ENST00000594399 CIZ1Q9ULV3 898 aaPredicted RBP12.45□□□□□ -0.42
USE1-204ENST00000594399 PCDHA4Q9UN74 947 aa12.45□□□□□ -0.42
USE1-204ENST00000594399 RIPK3Q9Y572 518 aa12.45□□□□□ -0.42
USE1-204ENST00000594399 NFIBO00712 420 aa12.44□□□□□ -0.42
USE1-204ENST00000594399 OPLAHO14841 1288 aa12.44□□□□□ -0.42
USE1-204ENST00000594399 ERCC3P19447 782 aa12.44□□□□□ -0.42
USE1-204ENST00000594399 MRPL12P52815 198 aaKnown RBP12.44□□□□□ -0.42
USE1-204ENST00000594399 NUCB2P80303 420 aa12.44□□□□□ -0.42
USE1-204ENST00000594399 GNL2Q13823 731 aaKnown RBP12.44□□□□□ -0.42
USE1-204ENST00000594399 NPY5RQ15761 445 aa12.44□□□□□ -0.42
USE1-204ENST00000594399 Q3C1V9 767 aa12.44□□□□□ -0.42
USE1-204ENST00000594399 MUM1L1Q5H9M0 696 aa12.44□□□□□ -0.42
USE1-204ENST00000594399 C17orf99Q6UX52 265 aa12.44□□□□□ -0.42
USE1-204ENST00000594399 MCF2L2Q86YR7 1114 aa12.44□□□□□ -0.42
USE1-204ENST00000594399 REXO1Q8N1G1 1221 aaKnown RBP12.44□□□□□ -0.42
USE1-204ENST00000594399 ABHD8Q96I13 439 aa12.44□□□□□ -0.42
USE1-204ENST00000594399 CFHR5Q9BXR6 569 aa12.44□□□□□ -0.42
USE1-204ENST00000594399 MROH8Q9H579 483 aa12.44□□□□□ -0.42
USE1-204ENST00000594399 MTMR6Q9Y217 621 aa12.44□□□□□ -0.42
USE1-204ENST00000594399 GCOM1H8Y6P7 765 aaPredicted RBP12.43□□□□□ -0.42
USE1-204ENST00000594399 PIK3CDO00329 1044 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms