RNA–Protein interactions for RNA: ENST00000593104.5

PRKCSH-220, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 4

Gene PRKCSH, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-220ENST00000593104 TLK2Q86UE8 772 aa13.34□□□□□ -0.27
PRKCSH-220ENST00000593104 GMCL1P1Q8NEA9 526 aa13.34□□□□□ -0.27
PRKCSH-220ENST00000593104 NEDD1Q8NHV4 660 aa13.34□□□□□ -0.27
PRKCSH-220ENST00000593104 TRPV6Q9H1D0 765 aa13.34□□□□□ -0.27
PRKCSH-220ENST00000593104 DCTPP1Q9H773 170 aa13.34□□□□□ -0.27
PRKCSH-220ENST00000593104 ACAD9Q9H845 621 aa13.34□□□□□ -0.27
PRKCSH-220ENST00000593104 GNEQ9Y223 722 aaKnown RBP13.34□□□□□ -0.27
PRKCSH-220ENST00000593104 DYNC1LI2O43237 492 aaPredicted RBP13.33□□□□□ -0.28
PRKCSH-220ENST00000593104 B4GALT4O60513 344 aa13.33□□□□□ -0.28
PRKCSH-220ENST00000593104 SLC1A4P43007 532 aa13.33□□□□□ -0.28
PRKCSH-220ENST00000593104 TTBK2Q6IQ55 1244 aa13.33□□□□□ -0.28
PRKCSH-220ENST00000593104 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.33□□□□□ -0.28
PRKCSH-220ENST00000593104 TMEM199Q8N511 208 aa13.33□□□□□ -0.28
PRKCSH-220ENST00000593104 PI4K2BQ8TCG2 481 aa13.33□□□□□ -0.28
PRKCSH-220ENST00000593104 SCLYQ96I15 445 aa13.33□□□□□ -0.28
PRKCSH-220ENST00000593104 TRERF1Q96PN7 1200 aa13.33□□□□□ -0.28
PRKCSH-220ENST00000593104 WNT8AQ9H1J5 351 aa13.33□□□□□ -0.28
PRKCSH-220ENST00000593104 SPC25Q9HBM1 224 aa13.33□□□□□ -0.28
PRKCSH-220ENST00000593104 IL17RBQ9NRM6 502 aa13.33□□□□□ -0.28
PRKCSH-220ENST00000593104 MROH7Q68CQ1 1323 aa13.33□□□□□ -0.28
PRKCSH-220ENST00000593104 PLIN4Q96Q06 1357 aa13.32□□□□□ -0.28
PRKCSH-220ENST00000593104 SCN5AQ14524 2016 aa13.32□□□□□ -0.28
PRKCSH-220ENST00000593104 IGFBP4P22692 258 aa13.32□□□□□ -0.28
PRKCSH-220ENST00000593104 SLC16A2P36021 539 aa13.32□□□□□ -0.28
PRKCSH-220ENST00000593104 STAT2P52630 851 aa13.32□□□□□ -0.28
PRKCSH-220ENST00000593104 OAZ1P54368 228 aa13.32□□□□□ -0.28
PRKCSH-220ENST00000593104 ITGA7Q13683 1181 aa13.32□□□□□ -0.28
PRKCSH-220ENST00000593104 VPS53Q5VIR6 699 aa13.32□□□□□ -0.28
PRKCSH-220ENST00000593104 NSMFQ6X4W1 530 aa13.32□□□□□ -0.28
PRKCSH-220ENST00000593104 STAG1Q8WVM7 1258 aa13.32□□□□□ -0.28
PRKCSH-220ENST00000593104 VWCEQ96DN2 955 aa13.32□□□□□ -0.28
PRKCSH-220ENST00000593104 FSD1Q9BTV5 496 aa13.32□□□□□ -0.28
PRKCSH-220ENST00000593104 NAPBQ9H115 298 aa13.32□□□□□ -0.28
PRKCSH-220ENST00000593104 HIPK3Q9H422 1215 aa13.32□□□□□ -0.28
PRKCSH-220ENST00000593104 IL23AQ9NPF7 189 aa13.32□□□□□ -0.28
PRKCSH-220ENST00000593104 FBXO40Q9UH90 709 aa13.32□□□□□ -0.28
PRKCSH-220ENST00000593104 PRR12Q9ULL5 1215 aa13.32□□□□□ -0.28
PRKCSH-220ENST00000593104 STX8Q9UNK0 236 aa13.32□□□□□ -0.28
PRKCSH-220ENST00000593104 TCF20Q9UGU0 1960 aaKnown RBP13.31□□□□□ -0.28
PRKCSH-220ENST00000593104 TLR3O15455 904 aaKnown RBP13.31□□□□□ -0.28
PRKCSH-220ENST00000593104 GNAT2P19087 354 aa13.31□□□□□ -0.28
PRKCSH-220ENST00000593104 FSCN1Q16658 493 aaKnown RBP13.31□□□□□ -0.28
PRKCSH-220ENST00000593104 TJAP1Q5JTD0 557 aa13.31□□□□□ -0.28
PRKCSH-220ENST00000593104 ZMYM1Q5SVZ6 1142 aa13.31□□□□□ -0.28
PRKCSH-220ENST00000593104 TAPT1Q6NXT6 567 aa13.31□□□□□ -0.28
PRKCSH-220ENST00000593104 GPATCH3Q96I76 525 aa13.31□□□□□ -0.28
PRKCSH-220ENST00000593104 GAS2L1Q99501 681 aaPredicted RBP13.31□□□□□ -0.28
PRKCSH-220ENST00000593104 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.31□□□□□ -0.28
PRKCSH-220ENST00000593104 PCDHB15Q9Y5E8 787 aa13.31□□□□□ -0.28
PRKCSH-220ENST00000593104 FRMPD2Q68DX3 1309 aaPredicted RBP13.31□□□□□ -0.28
PRKCSH-220ENST00000593104 RFXAPO00287 272 aa13.3□□□□□ -0.28
PRKCSH-220ENST00000593104 ZFYP08048 801 aaPredicted RBP13.3□□□□□ -0.28
PRKCSH-220ENST00000593104 CYP2C9P11712 490 aa13.3□□□□□ -0.28
PRKCSH-220ENST00000593104 PDE4BQ07343 736 aa13.3□□□□□ -0.28
PRKCSH-220ENST00000593104 CCDC96Q2M329 555 aa13.3□□□□□ -0.28
PRKCSH-220ENST00000593104 PSRC1Q6PGN9 363 aaPredicted RBP13.3□□□□□ -0.28
PRKCSH-220ENST00000593104 MICALL1Q8N3F8 863 aa13.3□□□□□ -0.28
PRKCSH-220ENST00000593104 SLC43A3Q8NBI5 491 aa13.3□□□□□ -0.28
PRKCSH-220ENST00000593104 HERVK_113Q902F9 699 aa13.3□□□□□ -0.28
PRKCSH-220ENST00000593104 NECAB3Q96P71 396 aaPredicted RBP13.3□□□□□ -0.28
PRKCSH-220ENST00000593104 NOC4LQ9BVI4 516 aaKnown RBP13.3□□□□□ -0.28
PRKCSH-220ENST00000593104 TRMT13Q9NUP7 481 aaKnown RBP13.3□□□□□ -0.28
PRKCSH-220ENST00000593104 CYP39A1Q9NYL5 469 aa13.3□□□□□ -0.28
PRKCSH-220ENST00000593104 CCPG1Q9ULG6 757 aa13.3□□□□□ -0.28
PRKCSH-220ENST00000593104 SPTBN5Q9NRC6 3674 aaKnown RBP13.3□□□□□ -0.28
PRKCSH-220ENST00000593104 ASB14A6NK59 587 aa13.29□□□□□ -0.28
PRKCSH-220ENST00000593104 TSPY2A6NKD2 308 aa13.29□□□□□ -0.28
PRKCSH-220ENST00000593104 NFIBO00712 420 aa13.29□□□□□ -0.28
PRKCSH-220ENST00000593104 FGBP02675 491 aa13.29□□□□□ -0.28
PRKCSH-220ENST00000593104 NKX3-2P78367 333 aa13.29□□□□□ -0.28
PRKCSH-220ENST00000593104 BAATQ14032 418 aaPredicted RBP13.29□□□□□ -0.28
PRKCSH-220ENST00000593104 KIAA1211Q6ZU35 1233 aa13.29□□□□□ -0.28
PRKCSH-220ENST00000593104 FAM160B2Q86V87 743 aa13.29□□□□□ -0.28
PRKCSH-220ENST00000593104 CHURC1Q8WUH1 139 aa13.29□□□□□ -0.28
PRKCSH-220ENST00000593104 GMCL1Q96IK5 515 aa13.29□□□□□ -0.28
PRKCSH-220ENST00000593104 NACAP1Q9BZK3 213 aa13.29□□□□□ -0.28
PRKCSH-220ENST00000593104 AP5M1Q9H0R1 490 aa13.29□□□□□ -0.28
PRKCSH-220ENST00000593104 CHMP4BQ9H444 224 aaKnown RBP13.29□□□□□ -0.28
PRKCSH-220ENST00000593104 CERS4Q9HA82 394 aa13.29□□□□□ -0.28
PRKCSH-220ENST00000593104 ZNF287Q9HBT7 754 aa13.29□□□□□ -0.28
PRKCSH-220ENST00000593104 GPCPD1Q9NPB8 672 aa13.29□□□□□ -0.28
PRKCSH-220ENST00000593104 ZBBXA8MT70 800 aa13.28□□□□□ -0.28
PRKCSH-220ENST00000593104 TNFRSF10AO00220 468 aa13.28□□□□□ -0.28
PRKCSH-220ENST00000593104 RANBP6O60518 1105 aaKnown RBP13.28□□□□□ -0.28
PRKCSH-220ENST00000593104 TTLL4Q14679 1199 aa13.28□□□□□ -0.28
PRKCSH-220ENST00000593104 KRT40Q6A162 431 aa13.28□□□□□ -0.28
PRKCSH-220ENST00000593104 RCSD1Q6JBY9 416 aa13.28□□□□□ -0.28
PRKCSH-220ENST00000593104 SLC30A10Q6XR72 485 aa13.28□□□□□ -0.28
PRKCSH-220ENST00000593104 DEFB128Q7Z7B8 93 aa13.28□□□□□ -0.28
PRKCSH-220ENST00000593104 SYMPKQ92797 1274 aaKnown RBP13.28□□□□□ -0.28
PRKCSH-220ENST00000593104 COPS5Q92905 334 aa13.28□□□□□ -0.28
PRKCSH-220ENST00000593104 MSRAQ9UJ68 235 aa13.28□□□□□ -0.28
PRKCSH-220ENST00000593104 SYNPO2Q9UMS6 1093 aa13.28□□□□□ -0.28
PRKCSH-220ENST00000593104 ARHGEF15O94989 841 aa13.27□□□□□ -0.29
PRKCSH-220ENST00000593104 MYL3P08590 195 aa13.27□□□□□ -0.29
PRKCSH-220ENST00000593104 COL9A1P20849 921 aa13.27□□□□□ -0.29
PRKCSH-220ENST00000593104 TFF2Q03403 129 aa13.27□□□□□ -0.29
PRKCSH-220ENST00000593104 RRP12Q5JTH9 1297 aaKnown RBP13.27□□□□□ -0.29
PRKCSH-220ENST00000593104 SPRED2Q7Z698 418 aa13.27□□□□□ -0.29
PRKCSH-220ENST00000593104 ADAMTS19Q8TE59 1207 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms