RNA–Protein interactions for RNA: ENST00000592965.2

MBD3-211, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 4

Gene MBD3, Length 568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-211ENST00000592965 PRDM5Q9NQX1 630 aaPredicted RBP27.37■■□□□ 1.97
MBD3-211ENST00000592965 DGKHQ86XP1 1220 aa27.36■■□□□ 1.97
MBD3-211ENST00000592965 PNMA2Q9UL42 364 aa27.36■■□□□ 1.97
MBD3-211ENST00000592965 ASTN1O14525 1302 aa27.36■■□□□ 1.97
MBD3-211ENST00000592965 GJA9P57773 515 aa27.35■■□□□ 1.97
MBD3-211ENST00000592965 CCDC178Q5BJE1 867 aa27.35■■□□□ 1.97
MBD3-211ENST00000592965 TTC22Q5TAA0 569 aa27.35■■□□□ 1.97
MBD3-211ENST00000592965 NUP133Q8WUM0 1156 aa27.35■■□□□ 1.97
MBD3-211ENST00000592965 SPC25Q9HBM1 224 aa27.35■■□□□ 1.97
MBD3-211ENST00000592965 CTNNA3Q9UI47 895 aa27.35■■□□□ 1.97
MBD3-211ENST00000592965 MYADML2A6NDP7 307 aa27.34■■□□□ 1.97
MBD3-211ENST00000592965 KCNA10Q16322 511 aa27.34■■□□□ 1.97
MBD3-211ENST00000592965 IMMTQ16891 758 aaKnown RBP27.34■■□□□ 1.97
MBD3-211ENST00000592965 NSMFQ6X4W1 530 aa27.34■■□□□ 1.97
MBD3-211ENST00000592965 IQCA1Q86XH1 822 aa27.34■■□□□ 1.97
MBD3-211ENST00000592965 KDM4AO75164 1064 aa27.33■■□□□ 1.97
MBD3-211ENST00000592965 C6orf222P0C671 652 aaPredicted RBP27.33■■□□□ 1.97
MBD3-211ENST00000592965 GSPT1P15170 499 aaKnown RBP27.33■■□□□ 1.97
MBD3-211ENST00000592965 NKX3-2P78367 333 aa27.33■■□□□ 1.97
MBD3-211ENST00000592965 GPATCH4Q5T3I0 446 aaKnown RBP27.33■■□□□ 1.97
MBD3-211ENST00000592965 SH3RF1Q7Z6J0 888 aa27.33■■□□□ 1.97
MBD3-211ENST00000592965 PCSK9Q8NBP7 692 aaKnown RBP27.33■■□□□ 1.97
MBD3-211ENST00000592965 ANKS1AQ92625 1134 aa27.33■■□□□ 1.97
MBD3-211ENST00000592965 ZKSCAN3Q9BRR0 538 aa27.33■■□□□ 1.97
MBD3-211ENST00000592965 STARD7Q9NQZ5 370 aa27.33■■□□□ 1.97
MBD3-211ENST00000592965 TRIM43BA6NCK2 446 aa27.32■■□□□ 1.96
MBD3-211ENST00000592965 CLTBP09497 229 aa27.32■■□□□ 1.96
MBD3-211ENST00000592965 ANKRD33Q7Z3H0 272 aa27.32■■□□□ 1.96
MBD3-211ENST00000592965 TRIM43Q96BQ3 446 aaPredicted RBP27.32■■□□□ 1.96
MBD3-211ENST00000592965 TOX2Q96NM4 488 aa27.32■■□□□ 1.96
MBD3-211ENST00000592965 IL25Q9H293 177 aa27.32■■□□□ 1.96
MBD3-211ENST00000592965 WDR19Q8NEZ3 1342 aa27.32■■□□□ 1.96
MBD3-211ENST00000592965 RAD50Q92878 1312 aa27.32■■□□□ 1.96
MBD3-211ENST00000592965 COL6A3P12111 3177 aa27.31■■□□□ 1.96
MBD3-211ENST00000592965 B4E1Z4 1266 aa27.31■■□□□ 1.96
MBD3-211ENST00000592965 NFIBO00712 420 aa27.31■■□□□ 1.96
MBD3-211ENST00000592965 PQBP1O60828 265 aaKnown RBP27.31■■□□□ 1.96
MBD3-211ENST00000592965 TNFAIP2Q03169 654 aa27.31■■□□□ 1.96
MBD3-211ENST00000592965 MORC4Q8TE76 937 aa27.31■■□□□ 1.96
MBD3-211ENST00000592965 ELP1O95163 1332 aa27.31■■□□□ 1.96
MBD3-211ENST00000592965 LOC102724159A0A0B4J2E5 919 aa27.3■■□□□ 1.96
MBD3-211ENST00000592965 KIAA0355O15063 1070 aa27.3■■□□□ 1.96
MBD3-211ENST00000592965 CTAGE5O15320 804 aa27.3■■□□□ 1.96
MBD3-211ENST00000592965 IRX5P78411 483 aaPredicted RBP27.3■■□□□ 1.96
MBD3-211ENST00000592965 BAATQ14032 418 aaPredicted RBP27.3■■□□□ 1.96
MBD3-211ENST00000592965 PWP2Q15269 919 aaKnown RBP27.3■■□□□ 1.96
MBD3-211ENST00000592965 PNMA1Q8ND90 353 aa27.3■■□□□ 1.96
MBD3-211ENST00000592965 BADQ92934 168 aa27.3■■□□□ 1.96
MBD3-211ENST00000592965 GLT1D1Q96MS3 346 aa27.3■■□□□ 1.96
MBD3-211ENST00000592965 ZSCAN10Q96SZ4 725 aaPredicted RBP27.3■■□□□ 1.96
MBD3-211ENST00000592965 ASGR1P07306 291 aa27.29■■□□□ 1.96
MBD3-211ENST00000592965 IRX6P78412 446 aaPredicted RBP27.29■■□□□ 1.96
MBD3-211ENST00000592965 GNASQ5JWF2 1037 aa27.29■■□□□ 1.96
MBD3-211ENST00000592965 CLEC4DQ8WXI8 215 aa27.29■■□□□ 1.96
MBD3-211ENST00000592965 KRT23Q9C075 422 aa27.29■■□□□ 1.96
MBD3-211ENST00000592965 CNNM2Q9H8M5 875 aa27.29■■□□□ 1.96
MBD3-211ENST00000592965 VTA1Q9NP79 307 aa27.29■■□□□ 1.96
MBD3-211ENST00000592965 ADD3Q9UEY8 706 aaKnown RBP27.29■■□□□ 1.96
MBD3-211ENST00000592965 GNEQ9Y223 722 aaKnown RBP27.29■■□□□ 1.96
MBD3-211ENST00000592965 MYH6P13533 1939 aa27.28■■□□□ 1.96
MBD3-211ENST00000592965 C11orf97A0A1B0GVM6 126 aaPredicted RBP27.28■■□□□ 1.96
MBD3-211ENST00000592965 ENAHQ8N8S7 591 aaPredicted RBP27.28■■□□□ 1.96
MBD3-211ENST00000592965 PURBQ96QR8 312 aaKnown RBP27.28■■□□□ 1.96
MBD3-211ENST00000592965 KAT14Q9H8E8 782 aa27.28■■□□□ 1.96
MBD3-211ENST00000592965 ZSWIM5Q9P217 1185 aa27.28■■□□□ 1.96
MBD3-211ENST00000592965 DDX49Q9Y6V7 483 aaKnown RBP27.28■■□□□ 1.96
MBD3-211ENST00000592965 MROH7Q68CQ1 1323 aa27.27■■□□□ 1.96
MBD3-211ENST00000592965 TAPT1Q6NXT6 567 aa27.27■■□□□ 1.96
MBD3-211ENST00000592965 TLK2Q86UE8 772 aa27.27■■□□□ 1.96
MBD3-211ENST00000592965 FBXO16Q8IX29 292 aaPredicted RBP27.27■■□□□ 1.96
MBD3-211ENST00000592965 TNKSO95271 1327 aa27.26■■□□□ 1.95
MBD3-211ENST00000592965 PTPDC1A2A3K4 754 aa27.26■■□□□ 1.95
MBD3-211ENST00000592965 DCDC2CA8MYV0 355 aa27.26■■□□□ 1.95
MBD3-211ENST00000592965 GOLGA8HP0CJ92 632 aa27.26■■□□□ 1.95
MBD3-211ENST00000592965 ITGB8P26012 769 aa27.26■■□□□ 1.95
MBD3-211ENST00000592965 ALDH5A1P51649 535 aaPredicted RBP27.26■■□□□ 1.95
MBD3-211ENST00000592965 FAAP100Q0VG06 881 aa27.26■■□□□ 1.95
MBD3-211ENST00000592965 IQSEC1Q6DN90 963 aa27.26■■□□□ 1.95
MBD3-211ENST00000592965 SLC30A10Q6XR72 485 aa27.26■■□□□ 1.95
MBD3-211ENST00000592965 NOL8Q76FK4 1167 aaKnown RBP27.26■■□□□ 1.95
MBD3-211ENST00000592965 DEFB123Q8N688 67 aa27.26■■□□□ 1.95
MBD3-211ENST00000592965 TMEM39AQ9NV64 488 aa27.26■■□□□ 1.95
MBD3-211ENST00000592965 A0A0U1RQG5 324 aaPredicted RBP27.25■■□□□ 1.95
MBD3-211ENST00000592965 SMPD1P17405 629 aa27.25■■□□□ 1.95
MBD3-211ENST00000592965 CDK7P50613 346 aa27.25■■□□□ 1.95
MBD3-211ENST00000592965 ASPRV1Q53RT3 343 aa27.25■■□□□ 1.95
MBD3-211ENST00000592965 RNF207Q6ZRF8 634 aa27.25■■□□□ 1.95
MBD3-211ENST00000592965 RUFY2Q8WXA3 655 aa27.25■■□□□ 1.95
MBD3-211ENST00000592965 UBAC1Q9BSL1 405 aa27.25■■□□□ 1.95
MBD3-211ENST00000592965 PDGFCQ9NRA1 345 aa27.25■■□□□ 1.95
MBD3-211ENST00000592965 Q9Y3F1 56 aa27.25■■□□□ 1.95
MBD3-211ENST00000592965 RAG1P15918 1043 aa27.24■■□□□ 1.95
MBD3-211ENST00000592965 SHHQ15465 462 aa27.24■■□□□ 1.95
MBD3-211ENST00000592965 FSCN1Q16658 493 aaKnown RBP27.24■■□□□ 1.95
MBD3-211ENST00000592965 EEPD1Q7L9B9 569 aa27.24■■□□□ 1.95
MBD3-211ENST00000592965 AP5M1Q9H0R1 490 aa27.24■■□□□ 1.95
MBD3-211ENST00000592965 CPVLQ9H3G5 476 aa27.24■■□□□ 1.95
MBD3-211ENST00000592965 TBX21Q9UL17 535 aa27.24■■□□□ 1.95
MBD3-211ENST00000592965 ARVCFO00192 962 aa27.23■■□□□ 1.95
MBD3-211ENST00000592965 CHMLP26374 656 aa27.23■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms