RNA–Protein interactions for RNA: ENST00000592909.1

SMCO4P1-201, Transcript of single-pass membrane protein with coiled-coil domains 4 pseudogene 1, humanhuman

BASIC

Gene SMCO4P1, Length 177 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4P1-201ENST00000592909 KRT40Q6A162 431 aa12.14□□□□□ -0.47
SMCO4P1-201ENST00000592909 ALYREFQ86V81 257 aaKnown RBP12.14□□□□□ -0.47
SMCO4P1-201ENST00000592909 MKL1Q969V6 931 aa12.14□□□□□ -0.47
SMCO4P1-201ENST00000592909 SLC4A4Q9Y6R1 1079 aa12.14□□□□□ -0.47
SMCO4P1-201ENST00000592909 XIRP2A4UGR9 3374 aa12.13□□□□□ -0.47
SMCO4P1-201ENST00000592909 IGKV6D-41A0A0C4DH26 115 aa12.13□□□□□ -0.47
SMCO4P1-201ENST00000592909 FAM86C2PA6NEL3 165 aa12.13□□□□□ -0.47
SMCO4P1-201ENST00000592909 ACTN1P12814 892 aa12.13□□□□□ -0.47
SMCO4P1-201ENST00000592909 RFC2P35250 354 aa12.13□□□□□ -0.47
SMCO4P1-201ENST00000592909 SBK1Q52WX2 424 aa12.13□□□□□ -0.47
SMCO4P1-201ENST00000592909 TAPT1Q6NXT6 567 aa12.13□□□□□ -0.47
SMCO4P1-201ENST00000592909 CLASRPQ8N2M8 674 aaKnown RBP12.13□□□□□ -0.47
SMCO4P1-201ENST00000592909 ARNTL2Q8WYA1 636 aa12.13□□□□□ -0.47
SMCO4P1-201ENST00000592909 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.13□□□□□ -0.47
SMCO4P1-201ENST00000592909 ACAD9Q9H845 621 aa12.13□□□□□ -0.47
SMCO4P1-201ENST00000592909 CD320Q9NPF0 282 aa12.13□□□□□ -0.47
SMCO4P1-201ENST00000592909 A1CFQ9NQ94 594 aaKnown RBP12.13□□□□□ -0.47
SMCO4P1-201ENST00000592909 PAG1Q9NWQ8 432 aa12.13□□□□□ -0.47
SMCO4P1-201ENST00000592909 LMCD1Q9NZU5 365 aa12.13□□□□□ -0.47
SMCO4P1-201ENST00000592909 ARPP21Q9UBL0 812 aaPredicted RBP12.13□□□□□ -0.47
SMCO4P1-201ENST00000592909 CLIP2Q9UDT6 1046 aa12.13□□□□□ -0.47
SMCO4P1-201ENST00000592909 SYNPO2Q9UMS6 1093 aa12.13□□□□□ -0.47
SMCO4P1-201ENST00000592909 PRR33A8MZF0 331 aa12.12□□□□□ -0.47
SMCO4P1-201ENST00000592909 KIF28PB7ZC32 967 aa12.12□□□□□ -0.47
SMCO4P1-201ENST00000592909 LPXNO60711 386 aa12.12□□□□□ -0.47
SMCO4P1-201ENST00000592909 ARHGEF15O94989 841 aa12.12□□□□□ -0.47
SMCO4P1-201ENST00000592909 PTGS1P23219 599 aa12.12□□□□□ -0.47
SMCO4P1-201ENST00000592909 GRB10Q13322 594 aa12.12□□□□□ -0.47
SMCO4P1-201ENST00000592909 DEFB128Q7Z7B8 93 aa12.12□□□□□ -0.47
SMCO4P1-201ENST00000592909 HERC6Q8IVU3 1022 aa12.12□□□□□ -0.47
SMCO4P1-201ENST00000592909 ITPRIPQ8IWB1 547 aa12.12□□□□□ -0.47
SMCO4P1-201ENST00000592909 RPAP2Q8IXW5 612 aaPredicted RBP12.12□□□□□ -0.47
SMCO4P1-201ENST00000592909 MKNK2Q9HBH9 465 aa12.12□□□□□ -0.47
SMCO4P1-201ENST00000592909 PDGFCQ9NRA1 345 aa12.12□□□□□ -0.47
SMCO4P1-201ENST00000592909 TRMT13Q9NUP7 481 aaKnown RBP12.12□□□□□ -0.47
SMCO4P1-201ENST00000592909 TNKSO95271 1327 aa12.11□□□□□ -0.47
SMCO4P1-201ENST00000592909 IFIT2P09913 472 aaKnown RBP12.11□□□□□ -0.47
SMCO4P1-201ENST00000592909 CYP2C9P11712 490 aa12.11□□□□□ -0.47
SMCO4P1-201ENST00000592909 TKFCQ3LXA3 575 aa12.11□□□□□ -0.47
SMCO4P1-201ENST00000592909 FTSJ3Q8IY81 847 aaKnown RBP12.11□□□□□ -0.47
SMCO4P1-201ENST00000592909 GMCL1P1Q8NEA9 526 aa12.11□□□□□ -0.47
SMCO4P1-201ENST00000592909 KIF1BPQ96EK5 621 aa12.11□□□□□ -0.47
SMCO4P1-201ENST00000592909 BOLA2Q9H3K6 86 aa12.11□□□□□ -0.47
SMCO4P1-201ENST00000592909 HOMER2Q9NSB8 354 aa12.11□□□□□ -0.47
SMCO4P1-201ENST00000592909 POLR3EQ9NVU0 708 aa12.11□□□□□ -0.47
SMCO4P1-201ENST00000592909 COG6Q9Y2V7 657 aa12.11□□□□□ -0.47
SMCO4P1-201ENST00000592909 GBF1Q92538 1859 aa12.1□□□□□ -0.47
SMCO4P1-201ENST00000592909 PITPNM1O00562 1244 aa12.1□□□□□ -0.47
SMCO4P1-201ENST00000592909 CHGBP05060 677 aa12.1□□□□□ -0.47
SMCO4P1-201ENST00000592909 IQCF3P0C7M6 154 aa12.1□□□□□ -0.47
SMCO4P1-201ENST00000592909 RLBP1P12271 317 aa12.1□□□□□ -0.47
SMCO4P1-201ENST00000592909 ATP5JP18859 108 aa12.1□□□□□ -0.47
SMCO4P1-201ENST00000592909 DUSP28Q4G0W2 176 aa12.1□□□□□ -0.47
SMCO4P1-201ENST00000592909 TMEM63BQ5T3F8 832 aa12.1□□□□□ -0.47
SMCO4P1-201ENST00000592909 GIMAP6Q6P9H5 292 aa12.1□□□□□ -0.47
SMCO4P1-201ENST00000592909 MORC4Q8TE76 937 aa12.1□□□□□ -0.47
SMCO4P1-201ENST00000592909 HAUS7Q99871 368 aa12.1□□□□□ -0.47
SMCO4P1-201ENST00000592909 PUS7LQ9H0K6 701 aaKnown RBP12.1□□□□□ -0.47
SMCO4P1-201ENST00000592909 VTA1Q9NP79 307 aa12.1□□□□□ -0.47
SMCO4P1-201ENST00000592909 RNF146Q9NTX7 359 aa12.1□□□□□ -0.47
SMCO4P1-201ENST00000592909 MTMR4Q9NYA4 1195 aa12.1□□□□□ -0.47
SMCO4P1-201ENST00000592909 ZNF536O15090 1300 aa12.1□□□□□ -0.47
SMCO4P1-201ENST00000592909 BRWD1Q9NSI6 2320 aa12.09□□□□□ -0.47
SMCO4P1-201ENST00000592909 MCM3APO60318 1980 aa12.09□□□□□ -0.47
SMCO4P1-201ENST00000592909 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.09□□□□□ -0.47
SMCO4P1-201ENST00000592909 BAIAP3O94812 1187 aa12.09□□□□□ -0.47
SMCO4P1-201ENST00000592909 TTLL1O95922 423 aa12.09□□□□□ -0.47
SMCO4P1-201ENST00000592909 BMP3P12645 472 aa12.09□□□□□ -0.47
SMCO4P1-201ENST00000592909 PURAQ00577 322 aaKnown RBP12.09□□□□□ -0.47
SMCO4P1-201ENST00000592909 SLFN13Q68D06 897 aa12.09□□□□□ -0.47
SMCO4P1-201ENST00000592909 ZSCAN25Q6NSZ9 544 aa12.09□□□□□ -0.47
SMCO4P1-201ENST00000592909 KIAA1211Q6ZU35 1233 aa12.09□□□□□ -0.47
SMCO4P1-201ENST00000592909 EEPD1Q7L9B9 569 aa12.09□□□□□ -0.47
SMCO4P1-201ENST00000592909 FAM160B2Q86V87 743 aa12.09□□□□□ -0.47
SMCO4P1-201ENST00000592909 FBXO16Q8IX29 292 aaPredicted RBP12.09□□□□□ -0.47
SMCO4P1-201ENST00000592909 FAM178BQ8IXR5 827 aa12.09□□□□□ -0.47
SMCO4P1-201ENST00000592909 GJD3Q8N144 294 aa12.09□□□□□ -0.47
SMCO4P1-201ENST00000592909 RETREG2Q8NC44 543 aa12.09□□□□□ -0.47
SMCO4P1-201ENST00000592909 CHURC1Q8WUH1 139 aa12.09□□□□□ -0.47
SMCO4P1-201ENST00000592909 CEP95Q96GE4 821 aa12.09□□□□□ -0.47
SMCO4P1-201ENST00000592909 TRERF1Q96PN7 1200 aa12.09□□□□□ -0.47
SMCO4P1-201ENST00000592909 STRBPQ96SI9 672 aaKnown RBP12.09□□□□□ -0.47
SMCO4P1-201ENST00000592909 MYH8P13535 1937 aa12.08□□□□□ -0.48
SMCO4P1-201ENST00000592909 GSG1L2A8MUP6 293 aa12.08□□□□□ -0.48
SMCO4P1-201ENST00000592909 TMEM232C9JQI7 657 aa12.08□□□□□ -0.48
SMCO4P1-201ENST00000592909 ALADP13716 330 aa12.08□□□□□ -0.48
SMCO4P1-201ENST00000592909 MRE11P49959 708 aa12.08□□□□□ -0.48
SMCO4P1-201ENST00000592909 STAT2P52630 851 aa12.08□□□□□ -0.48
SMCO4P1-201ENST00000592909 LEXMQ3ZCV2 418 aa12.08□□□□□ -0.48
SMCO4P1-201ENST00000592909 NFRKBQ6P4R8 1299 aa12.08□□□□□ -0.48
SMCO4P1-201ENST00000592909 SPRED2Q7Z698 418 aa12.08□□□□□ -0.48
SMCO4P1-201ENST00000592909 ZNF444Q8N0Y2 327 aaPredicted RBP12.08□□□□□ -0.48
SMCO4P1-201ENST00000592909 STAG1Q8WVM7 1258 aa12.08□□□□□ -0.48
SMCO4P1-201ENST00000592909 MTG1Q9BT17 334 aaPredicted RBP12.08□□□□□ -0.48
SMCO4P1-201ENST00000592909 FTOQ9C0B1 505 aaKnown RBP eCLIP12.08□□□□□ -0.48
SMCO4P1-201ENST00000592909 ZNF287Q9HBT7 754 aa12.08□□□□□ -0.48
SMCO4P1-201ENST00000592909 CYP39A1Q9NYL5 469 aa12.08□□□□□ -0.48
SMCO4P1-201ENST00000592909 DDX49Q9Y6V7 483 aaKnown RBP12.08□□□□□ -0.48
SMCO4P1-201ENST00000592909 LRRC37A2A6NM11 1700 aa12.08□□□□□ -0.48
SMCO4P1-201ENST00000592909 GREB1LQ9C091 1923 aaPredicted RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms