RNA–Protein interactions for RNA: ENST00000592822.1

TPM4-216, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-216ENST00000592822 IVNS1ABPQ9Y6Y0 642 aa11.54□□□□□ -0.56
TPM4-216ENST00000592822 PLXNA1Q9UIW2 1896 aa11.53□□□□□ -0.56
TPM4-216ENST00000592822 PNMA6FA0A0J9YX94 578 aa11.53□□□□□ -0.56
TPM4-216ENST00000592822 COBLO75128 1261 aa11.53□□□□□ -0.56
TPM4-216ENST00000592822 CYP2B6P20813 491 aa11.53□□□□□ -0.56
TPM4-216ENST00000592822 ADORA2AP29274 412 aa11.53□□□□□ -0.56
TPM4-216ENST00000592822 CCT2P78371 535 aaKnown RBP11.53□□□□□ -0.56
TPM4-216ENST00000592822 MAP2K5Q13163 448 aa11.53□□□□□ -0.56
TPM4-216ENST00000592822 IRF5Q13568 498 aa11.53□□□□□ -0.56
TPM4-216ENST00000592822 KCTD2Q14681 263 aa11.53□□□□□ -0.56
TPM4-216ENST00000592822 ANKRD1Q15327 319 aa11.53□□□□□ -0.56
TPM4-216ENST00000592822 RRP36Q96EU6 259 aaKnown RBP11.53□□□□□ -0.56
TPM4-216ENST00000592822 ACAD9Q9H845 621 aa11.53□□□□□ -0.56
TPM4-216ENST00000592822 A1CFQ9NQ94 594 aaKnown RBP11.53□□□□□ -0.56
TPM4-216ENST00000592822 FBXO40Q9UH90 709 aa11.53□□□□□ -0.56
TPM4-216ENST00000592822 CENPFP49454 3210 aa11.53□□□□□ -0.56
TPM4-216ENST00000592822 CNTNAP5Q8WYK1 1306 aa11.53□□□□□ -0.56
TPM4-216ENST00000592822 DNAJC25-GNG10A0A024R161 153 aa11.52□□□□□ -0.57
TPM4-216ENST00000592822 CCDC196A0A1B0GTZ2 297 aa11.52□□□□□ -0.57
TPM4-216ENST00000592822 hCG_1642624A0A1W2PR95 340 aa11.52□□□□□ -0.57
TPM4-216ENST00000592822 NFIBO00712 420 aa11.52□□□□□ -0.57
TPM4-216ENST00000592822 LARGE1O95461 756 aa11.52□□□□□ -0.57
TPM4-216ENST00000592822 PGK2P07205 417 aa11.52□□□□□ -0.57
TPM4-216ENST00000592822 HOXC6P09630 235 aa11.52□□□□□ -0.57
TPM4-216ENST00000592822 XRCC5P13010 732 aaKnown RBP11.52□□□□□ -0.57
TPM4-216ENST00000592822 RGS2P41220 211 aa11.52□□□□□ -0.57
TPM4-216ENST00000592822 STK3Q13188 491 aa11.52□□□□□ -0.57
TPM4-216ENST00000592822 RABEP1Q15276 862 aa11.52□□□□□ -0.57
TPM4-216ENST00000592822 NTRK3Q16288 839 aa11.52□□□□□ -0.57
TPM4-216ENST00000592822 NOL8Q76FK4 1167 aaKnown RBP11.52□□□□□ -0.57
TPM4-216ENST00000592822 NPLOC4Q8TAT6 608 aa11.52□□□□□ -0.57
TPM4-216ENST00000592822 RAET1EQ8TD07 263 aa11.52□□□□□ -0.57
TPM4-216ENST00000592822 AMNQ9BXJ7 453 aa11.52□□□□□ -0.57
TPM4-216ENST00000592822 ABCB11O95342 1321 aa11.52□□□□□ -0.57
TPM4-216ENST00000592822 LCTP09848 1927 aa11.52□□□□□ -0.57
TPM4-216ENST00000592822 RBBP6Q7Z6E9 1792 aaKnown RBP11.51□□□□□ -0.57
TPM4-216ENST00000592822 OPLAHO14841 1288 aa11.51□□□□□ -0.57
TPM4-216ENST00000592822 ADCY3O60266 1144 aa11.51□□□□□ -0.57
TPM4-216ENST00000592822 PFKFB2O60825 505 aa11.51□□□□□ -0.57
TPM4-216ENST00000592822 ELNP15502 786 aa11.51□□□□□ -0.57
TPM4-216ENST00000592822 SCRN1Q12765 414 aa11.51□□□□□ -0.57
TPM4-216ENST00000592822 CCL14Q16627 93 aa11.51□□□□□ -0.57
TPM4-216ENST00000592822 ME3Q16798 604 aa11.51□□□□□ -0.57
TPM4-216ENST00000592822 ZNF792Q3KQV3 632 aa11.51□□□□□ -0.57
TPM4-216ENST00000592822 DPP9Q86TI2 863 aa11.51□□□□□ -0.57
TPM4-216ENST00000592822 ANKRD35Q8N283 1001 aa11.51□□□□□ -0.57
TPM4-216ENST00000592822 DDX11Q96FC9 970 aa11.51□□□□□ -0.57
TPM4-216ENST00000592822 APBA2Q99767 749 aa11.51□□□□□ -0.57
TPM4-216ENST00000592822 SLKQ9H2G2 1235 aaPredicted RBP11.51□□□□□ -0.57
TPM4-216ENST00000592822 CYP39A1Q9NYL5 469 aa11.51□□□□□ -0.57
TPM4-216ENST00000592822 FLRT1Q9NZU1 646 aa11.51□□□□□ -0.57
TPM4-216ENST00000592822 PCDHA1Q9Y5I3 950 aa11.51□□□□□ -0.57
TPM4-216ENST00000592822 V9GY48 417 aaPredicted RBP11.51□□□□□ -0.57
TPM4-216ENST00000592822 PPFIA3O75145 1194 aa11.5□□□□□ -0.57
TPM4-216ENST00000592822 IGHA2P01877 340 aa11.5□□□□□ -0.57
TPM4-216ENST00000592822 IFNAR1P17181 557 aa11.5□□□□□ -0.57
TPM4-216ENST00000592822 GRK4P32298 578 aa11.5□□□□□ -0.57
TPM4-216ENST00000592822 BAATQ14032 418 aaPredicted RBP11.5□□□□□ -0.57
TPM4-216ENST00000592822 NSMFQ6X4W1 530 aa11.5□□□□□ -0.57
TPM4-216ENST00000592822 NECAB1Q8N987 351 aa11.5□□□□□ -0.57
TPM4-216ENST00000592822 SLAIN1Q8ND83 568 aa11.5□□□□□ -0.57
TPM4-216ENST00000592822 RGS22Q8NE09 1264 aa11.5□□□□□ -0.57
TPM4-216ENST00000592822 PXYLP1Q8TE99 480 aa11.5□□□□□ -0.57
TPM4-216ENST00000592822 SH3TC2Q8TF17 1288 aa11.5□□□□□ -0.57
TPM4-216ENST00000592822 TRIB2Q92519 343 aa11.5□□□□□ -0.57
TPM4-216ENST00000592822 TBC1D5Q92609 795 aa11.5□□□□□ -0.57
TPM4-216ENST00000592822 PHKBQ93100 1093 aa11.5□□□□□ -0.57
TPM4-216ENST00000592822 FGD4Q96M96 766 aa11.5□□□□□ -0.57
TPM4-216ENST00000592822 SEC63Q9UGP8 760 aaKnown RBP11.5□□□□□ -0.57
TPM4-216ENST00000592822 LIMCH1Q9UPQ0 1083 aa11.5□□□□□ -0.57
TPM4-216ENST00000592822 MRPL11Q9Y3B7 192 aaKnown RBP11.5□□□□□ -0.57
TPM4-216ENST00000592822 PFASO15067 1338 aa11.5□□□□□ -0.57
TPM4-216ENST00000592822 SOWAHBA6NEL2 793 aa11.49□□□□□ -0.57
TPM4-216ENST00000592822 PRPF3O43395 683 aaKnown RBP11.49□□□□□ -0.57
TPM4-216ENST00000592822 CD2BP2O95400 341 aaKnown RBP11.49□□□□□ -0.57
TPM4-216ENST00000592822 RPS6P62753 249 aaKnown RBP11.49□□□□□ -0.57
TPM4-216ENST00000592822 CNTN2Q02246 1040 aa11.49□□□□□ -0.57
TPM4-216ENST00000592822 ST3GAL1Q11201 340 aa11.49□□□□□ -0.57
TPM4-216ENST00000592822 TRAF1Q13077 416 aa11.49□□□□□ -0.57
TPM4-216ENST00000592822 PKN1Q16512 942 aa11.49□□□□□ -0.57
TPM4-216ENST00000592822 SLC9C1Q4G0N8 1177 aa11.49□□□□□ -0.57
TPM4-216ENST00000592822 SLC30A10Q6XR72 485 aa11.49□□□□□ -0.57
TPM4-216ENST00000592822 RNF207Q6ZRF8 634 aa11.49□□□□□ -0.57
TPM4-216ENST00000592822 FAM133AQ8N9E0 248 aa11.49□□□□□ -0.57
TPM4-216ENST00000592822 GPKOWQ92917 476 aaPredicted RBP eCLIP11.49□□□□□ -0.574e-10■□□□□ 9.3
TPM4-216ENST00000592822 GTF3C6Q969F1 213 aa11.49□□□□□ -0.57
TPM4-216ENST00000592822 MAML3Q96JK9 1138 aa11.49□□□□□ -0.57
TPM4-216ENST00000592822 PURBQ96QR8 312 aaKnown RBP11.49□□□□□ -0.57
TPM4-216ENST00000592822 DIS3Q9Y2L1 958 aaKnown RBP11.49□□□□□ -0.57
TPM4-216ENST00000592822 ASTN1O14525 1302 aa11.49□□□□□ -0.57
TPM4-216ENST00000592822 MCM3APO60318 1980 aa11.48□□□□□ -0.57
TPM4-216ENST00000592822 PTPDC1A2A3K4 754 aa11.48□□□□□ -0.57
TPM4-216ENST00000592822 POTEB2H3BUK9 544 aa11.48□□□□□ -0.57
TPM4-216ENST00000592822 CPLX1O14810 134 aa11.48□□□□□ -0.57
TPM4-216ENST00000592822 ST18O60284 1047 aa11.48□□□□□ -0.57
TPM4-216ENST00000592822 DTNBO60941 627 aa11.48□□□□□ -0.57
TPM4-216ENST00000592822 CTDNEP1O95476 244 aa11.48□□□□□ -0.57
TPM4-216ENST00000592822 INHAP05111 366 aa11.48□□□□□ -0.57
TPM4-216ENST00000592822 CALML3P27482 149 aa11.48□□□□□ -0.57
TPM4-216ENST00000592822 HSD17B4P51659 736 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms