RNA–Protein interactions for RNA: ENST00000592705.5

DNMT1-228, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 5,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-228ENST00000592705 PHKA1P46020 1223 aa14.03□□□□□ -0.16
DNMT1-228ENST00000592705 GBP6Q6ZN66 633 aa14.03□□□□□ -0.16
DNMT1-228ENST00000592705 ZBED2Q9BTP6 218 aa14.03□□□□□ -0.16
DNMT1-228ENST00000592705 GREM2Q9H772 168 aa14.03□□□□□ -0.16
DNMT1-228ENST00000592705 VIMP08670 466 aaKnown RBP14.02□□□□□ -0.16
DNMT1-228ENST00000592705 ZBTB16Q05516 673 aa14.02□□□□□ -0.16
DNMT1-228ENST00000592705 FAM71BQ8TC56 605 aa14.02□□□□□ -0.16
DNMT1-228ENST00000592705 DHX36Q9H2U1 1008 aaKnown RBP14.02□□□□□ -0.16
DNMT1-228ENST00000592705 HACL1Q9UJ83 578 aa14.02□□□□□ -0.16
DNMT1-228ENST00000592705 ABCA6Q8N139 1617 aa14.02□□□□□ -0.16
DNMT1-228ENST00000592705 GOLGA8KD6RF30 607 aa14.02□□□□□ -0.16
DNMT1-228ENST00000592705 OR52Z1P0C646 297 aa14.02□□□□□ -0.16
DNMT1-228ENST00000592705 TCP1P17987 556 aaKnown RBP14.02□□□□□ -0.16
DNMT1-228ENST00000592705 PEX26Q7Z412 305 aa14.02□□□□□ -0.16
DNMT1-228ENST00000592705 DEFB132Q7Z7B7 95 aa14.02□□□□□ -0.16
DNMT1-228ENST00000592705 NELFCDQ8IXH7 590 aa14.02□□□□□ -0.16
DNMT1-228ENST00000592705 KIF2CQ99661 725 aa14.02□□□□□ -0.16
DNMT1-228ENST00000592705 MCTP2Q6DN12 878 aa14.02□□□□□ -0.17
DNMT1-228ENST00000592705 MYOCDQ8IZQ8 938 aa14.02□□□□□ -0.17
DNMT1-228ENST00000592705 RIMBP3CA6NJZ7 1639 aa14.02□□□□□ -0.17
DNMT1-228ENST00000592705 RIMBP3BA6NNM3 1639 aa14.02□□□□□ -0.17
DNMT1-228ENST00000592705 RIMBP3Q9UFD9 1639 aa14.02□□□□□ -0.17
DNMT1-228ENST00000592705 LRRC7Q96NW7 1537 aa14.02□□□□□ -0.17
DNMT1-228ENST00000592705 SH2B2O14492 632 aaPredicted RBP14.02□□□□□ -0.17
DNMT1-228ENST00000592705 CASP14P31944 242 aa14.02□□□□□ -0.17
DNMT1-228ENST00000592705 ARHGEF1Q92888 912 aaKnown RBP14.02□□□□□ -0.17
DNMT1-228ENST00000592705 ATP8A2Q9NTI2 1148 aa14.02□□□□□ -0.17
DNMT1-228ENST00000592705 EXOC7Q9UPT5 735 aa14.02□□□□□ -0.17
DNMT1-228ENST00000592705 WDR44Q5JSH3 913 aa14.01□□□□□ -0.17
DNMT1-228ENST00000592705 VSTM4Q8IW00 320 aa14.01□□□□□ -0.17
DNMT1-228ENST00000592705 PNMA1Q8ND90 353 aa14.01□□□□□ -0.17
DNMT1-228ENST00000592705 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.01□□□□□ -0.17
DNMT1-228ENST00000592705 TBC1D7Q9P0N9 293 aa14.01□□□□□ -0.17
DNMT1-228ENST00000592705 ERCC6L2Q5T890 1561 aa14.01□□□□□ -0.17
DNMT1-228ENST00000592705 REREQ9P2R6 1566 aa14.01□□□□□ -0.17
DNMT1-228ENST00000592705 POLR1AO95602 1720 aaPredicted RBP14.01□□□□□ -0.17
DNMT1-228ENST00000592705 DDX39AO00148 427 aaKnown RBP14.01□□□□□ -0.17
DNMT1-228ENST00000592705 LACTBP83111 547 aaPredicted RBP14.01□□□□□ -0.17
DNMT1-228ENST00000592705 INF2Q27J81 1249 aa14.01□□□□□ -0.17
DNMT1-228ENST00000592705 ENOX1Q8TC92 643 aaKnown RBP14.01□□□□□ -0.17
DNMT1-228ENST00000592705 LSM14BQ9BX40 385 aaKnown RBP14.01□□□□□ -0.17
DNMT1-228ENST00000592705 BRIP1Q9BX63 1249 aa14.01□□□□□ -0.17
DNMT1-228ENST00000592705 NLRC4Q9NPP4 1024 aa14.01□□□□□ -0.17
DNMT1-228ENST00000592705 PLCB1Q9NQ66 1216 aa14.01□□□□□ -0.17
DNMT1-228ENST00000592705 CRB1P82279 1406 aa14.01□□□□□ -0.17
DNMT1-228ENST00000592705 NCAPD2Q15021 1401 aa14.01□□□□□ -0.17
DNMT1-228ENST00000592705 MXRA7P84157 204 aa14.01□□□□□ -0.17
DNMT1-228ENST00000592705 BIRC3Q13489 604 aa14.01□□□□□ -0.17
DNMT1-228ENST00000592705 TOB2Q14106 344 aaPredicted RBP14.01□□□□□ -0.17
DNMT1-228ENST00000592705 DAAM2Q86T65 1068 aa14.01□□□□□ -0.17
DNMT1-228ENST00000592705 METTL13Q8N6R0 699 aa14.01□□□□□ -0.17
DNMT1-228ENST00000592705 OSBP2Q969R2 916 aa14.01□□□□□ -0.17
DNMT1-228ENST00000592705 CUEDC2Q9H467 287 aa14.01□□□□□ -0.17
DNMT1-228ENST00000592705 ZDHHC9Q9Y397 364 aa14.01□□□□□ -0.17
DNMT1-228ENST00000592705 HEG1Q9ULI3 1381 aa14.01□□□□□ -0.17
DNMT1-228ENST00000592705 MMP1P03956 469 aa14.01□□□□□ -0.17
DNMT1-228ENST00000592705 PODNQ7Z5L7 613 aa14.01□□□□□ -0.17
DNMT1-228ENST00000592705 NEK8Q86SG6 692 aa14.01□□□□□ -0.17
DNMT1-228ENST00000592705 TRIM7Q9C029 511 aa14.01□□□□□ -0.17
DNMT1-228ENST00000592705 MTIF3Q9H2K0 278 aaKnown RBP14.01□□□□□ -0.17
DNMT1-228ENST00000592705 ZNF277Q9NRM2 450 aaPredicted RBP14.01□□□□□ -0.17
DNMT1-228ENST00000592705 MAN1B1Q9UKM7 699 aa14.01□□□□□ -0.17
DNMT1-228ENST00000592705 LAD1O00515 517 aa14□□□□□ -0.17
DNMT1-228ENST00000592705 KRT5P13647 590 aa14□□□□□ -0.17
DNMT1-228ENST00000592705 TAOK1Q7L7X3 1001 aa14□□□□□ -0.17
DNMT1-228ENST00000592705 RETREG2Q8NC44 543 aa14□□□□□ -0.17
DNMT1-228ENST00000592705 CTTNBP2NLQ9P2B4 639 aa14□□□□□ -0.17
DNMT1-228ENST00000592705 DDX41Q9UJV9 622 aaKnown RBP14□□□□□ -0.17
DNMT1-228ENST00000592705 CCPG1Q9ULG6 757 aa14□□□□□ -0.17
DNMT1-228ENST00000592705 PPFIA4O75335 1185 aa14□□□□□ -0.17
DNMT1-228ENST00000592705 ALDH3A1P30838 453 aa14□□□□□ -0.17
DNMT1-228ENST00000592705 RSRC1Q96IZ7 334 aaKnown RBP14□□□□□ -0.17
DNMT1-228ENST00000592705 ATP10DQ9P241 1426 aa14□□□□□ -0.17
DNMT1-228ENST00000592705 SKIV2LQ15477 1246 aaKnown RBP14□□□□□ -0.17
DNMT1-228ENST00000592705 SLFN13Q68D06 897 aa14□□□□□ -0.17
DNMT1-228ENST00000592705 OTUD6AQ7L8S5 288 aa14□□□□□ -0.17
DNMT1-228ENST00000592705 GOLGA5Q8TBA6 731 aa14□□□□□ -0.17
DNMT1-228ENST00000592705 SMC6Q96SB8 1091 aa14□□□□□ -0.17
DNMT1-228ENST00000592705 SLFN14P0C7P3 912 aa14□□□□□ -0.17
DNMT1-228ENST00000592705 BCRP11274 1271 aa14□□□□□ -0.17
DNMT1-228ENST00000592705 IFNAR1P17181 557 aa14□□□□□ -0.17
DNMT1-228ENST00000592705 EEF1GP26641 437 aaKnown RBP14□□□□□ -0.17
DNMT1-228ENST00000592705 TECP42680 631 aa14□□□□□ -0.17
DNMT1-228ENST00000592705 TRPC3Q13507 836 aa14□□□□□ -0.17
DNMT1-228ENST00000592705 INTS8Q75QN2 995 aaKnown RBP14□□□□□ -0.17
DNMT1-228ENST00000592705 MRPL44Q9H9J2 332 aaKnown RBP14□□□□□ -0.17
DNMT1-228ENST00000592705 ADGRB3O60242 1522 aa14□□□□□ -0.17
DNMT1-228ENST00000592705 RBL2Q08999 1139 aa13.99□□□□□ -0.17
DNMT1-228ENST00000592705 RAB17Q9H0T7 212 aa13.99□□□□□ -0.17
DNMT1-228ENST00000592705 GCNT3O95395 438 aa13.99□□□□□ -0.17
DNMT1-228ENST00000592705 SLC15A2Q16348 729 aa13.99□□□□□ -0.17
DNMT1-228ENST00000592705 LIN9Q5TKA1 542 aa13.99□□□□□ -0.17
DNMT1-228ENST00000592705 MYCT1Q8N699 235 aa13.99□□□□□ -0.17
DNMT1-228ENST00000592705 CABS1Q96KC9 395 aa13.99□□□□□ -0.17
DNMT1-228ENST00000592705 TRIM31Q9BZY9 425 aa13.99□□□□□ -0.17
DNMT1-228ENST00000592705 KCNH4Q9UQ05 1017 aa13.99□□□□□ -0.17
DNMT1-228ENST00000592705 RFX7Q2KHR2 1363 aa13.99□□□□□ -0.17
DNMT1-228ENST00000592705 POLR2MP0CAP2 368 aa13.99□□□□□ -0.17
DNMT1-228ENST00000592705 ERCC3P19447 782 aa13.99□□□□□ -0.17
DNMT1-228ENST00000592705 MRPS9P82933 396 aaKnown RBP13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms