RNA–Protein interactions for RNA: ENST00000592158.1

SMARCA4-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 409 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-218ENST00000592158 ZBTB21Q9ULJ3 1066 aa11.03□□□□□ -0.64
SMARCA4-218ENST00000592158 USP18Q9UMW8 372 aa11.03□□□□□ -0.64
SMARCA4-218ENST00000592158 DMXL2Q8TDJ6 3036 aa11.02□□□□□ -0.65
SMARCA4-218ENST00000592158 LMBR1LQ6UX01 489 aa11.02□□□□□ -0.65
SMARCA4-218ENST00000592158 HECTD1Q9ULT8 2610 aa11.01□□□□□ -0.65
SMARCA4-218ENST00000592158 SLC30A4O14863 429 aa11.01□□□□□ -0.65
SMARCA4-218ENST00000592158 NPM3O75607 178 aaKnown RBP11.01□□□□□ -0.65
SMARCA4-218ENST00000592158 ATF7P17544 494 aaPredicted RBP11.01□□□□□ -0.65
SMARCA4-218ENST00000592158 TMPOP42166 694 aaKnown RBP11.01□□□□□ -0.65
SMARCA4-218ENST00000592158 BTDP43251 543 aa11.01□□□□□ -0.65
SMARCA4-218ENST00000592158 RBM25P49756 843 aaKnown RBP11.01□□□□□ -0.65
SMARCA4-218ENST00000592158 NKX3-2P78367 333 aa11.01□□□□□ -0.65
SMARCA4-218ENST00000592158 LMOD3Q0VAK6 560 aa11.01□□□□□ -0.65
SMARCA4-218ENST00000592158 CCDC144BQ3MJ40 725 aa11.01□□□□□ -0.65
SMARCA4-218ENST00000592158 N4BP2L1Q5TBK1 243 aaPredicted RBP11.01□□□□□ -0.65
SMARCA4-218ENST00000592158 TMEM192Q8IY95 271 aa11.01□□□□□ -0.65
SMARCA4-218ENST00000592158 CCDC146Q8IYE0 955 aa11.01□□□□□ -0.65
SMARCA4-218ENST00000592158 ADAM32Q8TC27 787 aa11.01□□□□□ -0.65
SMARCA4-218ENST00000592158 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.01□□□□□ -0.65
SMARCA4-218ENST00000592158 RTP3Q9BQQ7 232 aa11.01□□□□□ -0.65
SMARCA4-218ENST00000592158 GINM1Q9NU53 330 aa11.01□□□□□ -0.65
SMARCA4-218ENST00000592158 TENM4Q6N022 2769 aa11.01□□□□□ -0.65
SMARCA4-218ENST00000592158 MROH5Q6ZUA9 1318 aa11.01□□□□□ -0.65
SMARCA4-218ENST00000592158 MCM3APO60318 1980 aa11.01□□□□□ -0.65
SMARCA4-218ENST00000592158 WDFY3Q8IZQ1 3526 aa11.01□□□□□ -0.65
SMARCA4-218ENST00000592158 PITPNM1O00562 1244 aa11□□□□□ -0.65
SMARCA4-218ENST00000592158 SP100P23497 879 aaPredicted RBP11□□□□□ -0.65
SMARCA4-218ENST00000592158 USP14P54578 494 aa11□□□□□ -0.65
SMARCA4-218ENST00000592158 ACVR2BQ13705 512 aa11□□□□□ -0.65
SMARCA4-218ENST00000592158 COG2Q14746 738 aa11□□□□□ -0.65
SMARCA4-218ENST00000592158 RALBP1Q15311 655 aa11□□□□□ -0.65
SMARCA4-218ENST00000592158 NEUROD2Q15784 382 aa11□□□□□ -0.65
SMARCA4-218ENST00000592158 FBXO11Q86XK2 927 aa11□□□□□ -0.65
SMARCA4-218ENST00000592158 MSL3Q8N5Y2 521 aaKnown RBP11□□□□□ -0.65
SMARCA4-218ENST00000592158 SP7Q8TDD2 431 aaPredicted RBP11□□□□□ -0.65
SMARCA4-218ENST00000592158 HOXC10Q9NYD6 342 aa11□□□□□ -0.65
SMARCA4-218ENST00000592158 SALL1Q9NSC2 1324 aa11□□□□□ -0.65
SMARCA4-218ENST00000592158 SIPA1L1O43166 1804 aa11□□□□□ -0.65
SMARCA4-218ENST00000592158 MICAL3Q7RTP6 2002 aa10.99□□□□□ -0.65
SMARCA4-218ENST00000592158 KINO60870 393 aaKnown RBP10.99□□□□□ -0.65
SMARCA4-218ENST00000592158 CSPG5O95196 566 aa10.99□□□□□ -0.65
SMARCA4-218ENST00000592158 RHBDL3P58872 404 aa10.99□□□□□ -0.65
SMARCA4-218ENST00000592158 CNKSR3Q6P9H4 555 aa10.99□□□□□ -0.65
SMARCA4-218ENST00000592158 KIF12Q96FN5 646 aa10.99□□□□□ -0.65
SMARCA4-218ENST00000592158 LMAN2LQ9H0V9 348 aa10.99□□□□□ -0.65
SMARCA4-218ENST00000592158 ABHD14A-ACY1A0A1B0GW23 586 aa10.98□□□□□ -0.65
SMARCA4-218ENST00000592158 SP9P0CG40 484 aa10.98□□□□□ -0.65
SMARCA4-218ENST00000592158 NPR3P17342 541 aa10.98□□□□□ -0.65
SMARCA4-218ENST00000592158 TGM1P22735 817 aa10.98□□□□□ -0.65
SMARCA4-218ENST00000592158 HTRA4P83105 476 aaPredicted RBP10.98□□□□□ -0.65
SMARCA4-218ENST00000592158 SUSD6Q92537 303 aa10.98□□□□□ -0.65
SMARCA4-218ENST00000592158 SECISBP2LQ93073 1101 aaKnown RBP10.98□□□□□ -0.65
SMARCA4-218ENST00000592158 MYH16Q9H6N6 1097 aa10.98□□□□□ -0.65
SMARCA4-218ENST00000592158 DNAJC18Q9H819 358 aa10.98□□□□□ -0.65
SMARCA4-218ENST00000592158 PI4KBQ9UBF8 816 aa10.98□□□□□ -0.65
SMARCA4-218ENST00000592158 BARX2Q9UMQ3 279 aaPredicted RBP10.98□□□□□ -0.65
SMARCA4-218ENST00000592158 ASTN1O14525 1302 aa10.98□□□□□ -0.65
SMARCA4-218ENST00000592158 PTPN13Q12923 2485 aa10.97□□□□□ -0.65
SMARCA4-218ENST00000592158 GRM6O15303 877 aa10.97□□□□□ -0.65
SMARCA4-218ENST00000592158 ZEB2O60315 1214 aa10.97□□□□□ -0.65
SMARCA4-218ENST00000592158 SLC25A27O95847 323 aa10.97□□□□□ -0.65
SMARCA4-218ENST00000592158 SMPD1P17405 629 aa10.97□□□□□ -0.65
SMARCA4-218ENST00000592158 BFSP2Q13515 415 aa10.97□□□□□ -0.65
SMARCA4-218ENST00000592158 GPNMBQ14956 572 aa10.97□□□□□ -0.65
SMARCA4-218ENST00000592158 FSCN1Q16658 493 aaKnown RBP10.97□□□□□ -0.65
SMARCA4-218ENST00000592158 TCTN1Q2MV58 587 aa10.97□□□□□ -0.65
SMARCA4-218ENST00000592158 METTL24Q5JXM2 366 aa10.97□□□□□ -0.65
SMARCA4-218ENST00000592158 MB21D1Q8N884 522 aa10.97□□□□□ -0.65
SMARCA4-218ENST00000592158 NETO1Q8TDF5 533 aa10.97□□□□□ -0.65
SMARCA4-218ENST00000592158 KIAA1683Q9H0B3 1180 aa10.97□□□□□ -0.65
SMARCA4-218ENST00000592158 ADAMTS20P59510 1910 aa10.97□□□□□ -0.65
SMARCA4-218ENST00000592158 CACNA1IQ9P0X4 2223 aa10.96□□□□□ -0.65
SMARCA4-218ENST00000592158 EIF4E1BA6NMX2 242 aaKnown RBP10.96□□□□□ -0.65
SMARCA4-218ENST00000592158 ELL2O00472 640 aaPredicted RBP10.96□□□□□ -0.65
SMARCA4-218ENST00000592158 GH2P01242 217 aa10.96□□□□□ -0.65
SMARCA4-218ENST00000592158 WDR43Q15061 677 aaKnown RBP eCLIP10.96□□□□□ -0.65
SMARCA4-218ENST00000592158 LRRFIP1Q32MZ4 808 aaKnown RBP10.96□□□□□ -0.65
SMARCA4-218ENST00000592158 MAMDC4Q6UXC1 1216 aa10.96□□□□□ -0.65
SMARCA4-218ENST00000592158 NOL8Q76FK4 1167 aaKnown RBP10.96□□□□□ -0.65
SMARCA4-218ENST00000592158 DZIP1Q86YF9 867 aaKnown RBP10.96□□□□□ -0.65
SMARCA4-218ENST00000592158 SLF2Q8IX21 1173 aa10.96□□□□□ -0.65
SMARCA4-218ENST00000592158 FAM163AQ96GL9 167 aaPredicted RBP10.96□□□□□ -0.65
SMARCA4-218ENST00000592158 ABHD16BQ9H3Z7 469 aa10.96□□□□□ -0.65
SMARCA4-218ENST00000592158 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.96□□□□□ -0.65
SMARCA4-218ENST00000592158 TMEM8BA6NDV4 472 aa10.95□□□□□ -0.66
SMARCA4-218ENST00000592158 EFCAB14O75071 495 aa10.95□□□□□ -0.66
SMARCA4-218ENST00000592158 KRT38O76015 456 aa10.95□□□□□ -0.66
SMARCA4-218ENST00000592158 PDE8BO95263 885 aa10.95□□□□□ -0.66
SMARCA4-218ENST00000592158 IFIT1P09914 478 aaKnown RBP10.95□□□□□ -0.66
SMARCA4-218ENST00000592158 DDX10Q13206 875 aaKnown RBP10.95□□□□□ -0.66
SMARCA4-218ENST00000592158 LARP1BQ659C4 914 aaKnown RBP10.95□□□□□ -0.66
SMARCA4-218ENST00000592158 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.95□□□□□ -0.66
SMARCA4-218ENST00000592158 EFHBQ8N7U6 833 aa10.95□□□□□ -0.66
SMARCA4-218ENST00000592158 ACER1Q8TDN7 264 aa10.95□□□□□ -0.66
SMARCA4-218ENST00000592158 TRIM34Q9BYJ4 488 aa10.95□□□□□ -0.66
SMARCA4-218ENST00000592158 TANGO6Q9C0B7 1094 aa10.95□□□□□ -0.66
SMARCA4-218ENST00000592158 PARD6AQ9NPB6 346 aa10.95□□□□□ -0.66
SMARCA4-218ENST00000592158 TRIM35Q9UPQ4 493 aa10.95□□□□□ -0.66
SMARCA4-218ENST00000592158 PIEZO2Q9H5I5 2752 aa10.94□□□□□ -0.66
SMARCA4-218ENST00000592158 MROH7-TTC4A0A0A0MT08 1334 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms