RNA–Protein interactions for RNA: ENST00000592106.5

VMP1-214, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-214ENST00000592106 KLHDC9Q8NEP7 349 aa11.97□□□□□ -0.49
VMP1-214ENST00000592106 TOX2Q96NM4 488 aa11.97□□□□□ -0.49
VMP1-214ENST00000592106 TRERF1Q96PN7 1200 aa11.97□□□□□ -0.49
VMP1-214ENST00000592106 TMEM39AQ9NV64 488 aa11.97□□□□□ -0.49
VMP1-214ENST00000592106 PNMA2Q9UL42 364 aa11.97□□□□□ -0.49
VMP1-214ENST00000592106 ELP1O95163 1332 aa11.96□□□□□ -0.49
VMP1-214ENST00000592106 A0A0U1RQG5 324 aaPredicted RBP11.96□□□□□ -0.49
VMP1-214ENST00000592106 TRIM43BA6NCK2 446 aa11.96□□□□□ -0.49
VMP1-214ENST00000592106 TRIM6-TRIM34B2RNG4 842 aa11.96□□□□□ -0.49
VMP1-214ENST00000592106 KIAA0355O15063 1070 aa11.96□□□□□ -0.49
VMP1-214ENST00000592106 GJA9P57773 515 aa11.96□□□□□ -0.49
VMP1-214ENST00000592106 FPGSQ05932 587 aa11.96□□□□□ -0.49
VMP1-214ENST00000592106 KCNA10Q16322 511 aa11.96□□□□□ -0.49
VMP1-214ENST00000592106 CCDC144BQ3MJ40 725 aa11.96□□□□□ -0.49
VMP1-214ENST00000592106 NOL8Q76FK4 1167 aaKnown RBP11.96□□□□□ -0.49
VMP1-214ENST00000592106 CCDC144CPQ8IYA2 1237 aa11.96□□□□□ -0.49
VMP1-214ENST00000592106 VTI1AQ96AJ9 217 aa11.96□□□□□ -0.49
VMP1-214ENST00000592106 TRIM43Q96BQ3 446 aaPredicted RBP11.96□□□□□ -0.49
VMP1-214ENST00000592106 RNPC3Q96LT9 517 aaKnown RBP11.96□□□□□ -0.49
VMP1-214ENST00000592106 UPF3AQ9H1J1 476 aaKnown RBP11.96□□□□□ -0.49
VMP1-214ENST00000592106 A1CFQ9NQ94 594 aaKnown RBP11.96□□□□□ -0.49
VMP1-214ENST00000592106 CCPG1Q9ULG6 757 aa11.96□□□□□ -0.49
VMP1-214ENST00000592106 MTMR7Q9Y216 660 aa11.96□□□□□ -0.49
VMP1-214ENST00000592106 CCDC171Q6TFL3 1326 aa11.95□□□□□ -0.5
VMP1-214ENST00000592106 SMCHD1A6NHR9 2005 aa11.95□□□□□ -0.5
VMP1-214ENST00000592106 ZEB2O60315 1214 aa11.95□□□□□ -0.5
VMP1-214ENST00000592106 TOP1P11387 765 aaKnown RBP11.95□□□□□ -0.5
VMP1-214ENST00000592106 NT5C2P49902 561 aa11.95□□□□□ -0.5
VMP1-214ENST00000592106 SMAD3P84022 425 aaKnown RBP11.95□□□□□ -0.5
VMP1-214ENST00000592106 SHHQ15465 462 aa11.95□□□□□ -0.5
VMP1-214ENST00000592106 RRP12Q5JTH9 1297 aaKnown RBP11.95□□□□□ -0.5
VMP1-214ENST00000592106 GNASQ5JWF2 1037 aa11.95□□□□□ -0.5
VMP1-214ENST00000592106 VPS53Q5VIR6 699 aa11.95□□□□□ -0.5
VMP1-214ENST00000592106 ANKRD33Q7Z3H0 272 aa11.95□□□□□ -0.5
VMP1-214ENST00000592106 SH3RF1Q7Z6J0 888 aa11.95□□□□□ -0.5
VMP1-214ENST00000592106 FAM133AQ8N9E0 248 aa11.95□□□□□ -0.5
VMP1-214ENST00000592106 RILPL2Q969X0 211 aa11.95□□□□□ -0.5
VMP1-214ENST00000592106 FGD4Q96M96 766 aa11.95□□□□□ -0.5
VMP1-214ENST00000592106 AGBL1Q96MI9 1066 aa11.95□□□□□ -0.5
VMP1-214ENST00000592106 MPHOSPH6Q99547 160 aaKnown RBP11.95□□□□□ -0.5
VMP1-214ENST00000592106 AP5M1Q9H0R1 490 aa11.95□□□□□ -0.5
VMP1-214ENST00000592106 RWDD1Q9H446 243 aaPredicted RBP11.95□□□□□ -0.5
VMP1-214ENST00000592106 RNF41Q9H4P4 317 aaPredicted RBP11.95□□□□□ -0.5
VMP1-214ENST00000592106 PRR12Q9ULL5 1215 aa11.95□□□□□ -0.5
VMP1-214ENST00000592106 ZNF536O15090 1300 aa11.94□□□□□ -0.5
VMP1-214ENST00000592106 TMEM265A0A087WTH1 108 aa11.94□□□□□ -0.5
VMP1-214ENST00000592106 A0A0D9SFI3 127 aa11.94□□□□□ -0.5
VMP1-214ENST00000592106 FOXP2O15409 715 aa11.94□□□□□ -0.5
VMP1-214ENST00000592106 CABYRO75952 493 aa11.94□□□□□ -0.5
VMP1-214ENST00000592106 ICAM1P05362 532 aa11.94□□□□□ -0.5
VMP1-214ENST00000592106 ASGR1P07306 291 aa11.94□□□□□ -0.5
VMP1-214ENST00000592106 HSPD1P10809 573 aaKnown RBP11.94□□□□□ -0.5
VMP1-214ENST00000592106 CNTN2Q02246 1040 aa11.94□□□□□ -0.5
VMP1-214ENST00000592106 TNFAIP2Q03169 654 aa11.94□□□□□ -0.5
VMP1-214ENST00000592106 C9orf50Q5SZB4 431 aa11.94□□□□□ -0.5
VMP1-214ENST00000592106 SYDE2Q5VT97 1194 aa11.94□□□□□ -0.5
VMP1-214ENST00000592106 NSMFQ6X4W1 530 aa11.94□□□□□ -0.5
VMP1-214ENST00000592106 EFCAB3Q8N7B9 438 aa11.94□□□□□ -0.5
VMP1-214ENST00000592106 CHMP4CQ96CF2 233 aa11.94□□□□□ -0.5
VMP1-214ENST00000592106 SEZ6LQ9BYH1 1024 aa11.94□□□□□ -0.5
VMP1-214ENST00000592106 LNPKQ9C0E8 428 aa11.94□□□□□ -0.5
VMP1-214ENST00000592106 IL17RBQ9NRM6 502 aa11.94□□□□□ -0.5
VMP1-214ENST00000592106 TCP11L1Q9NUJ3 509 aa11.94□□□□□ -0.5
VMP1-214ENST00000592106 ADD3Q9UEY8 706 aaKnown RBP11.94□□□□□ -0.5
VMP1-214ENST00000592106 CUL9Q8IWT3 2517 aa11.93□□□□□ -0.5
VMP1-214ENST00000592106 LOC102724159A0A0B4J2E5 919 aa11.93□□□□□ -0.5
VMP1-214ENST00000592106 MYADML2A6NDP7 307 aa11.93□□□□□ -0.5
VMP1-214ENST00000592106 HIP1O00291 1037 aa11.93□□□□□ -0.5
VMP1-214ENST00000592106 NMT2O60551 498 aa11.93□□□□□ -0.5
VMP1-214ENST00000592106 SEC24BO95487 1268 aa11.93□□□□□ -0.5
VMP1-214ENST00000592106 FGAP02671 866 aa11.93□□□□□ -0.5
VMP1-214ENST00000592106 FGRP09769 529 aa11.93□□□□□ -0.5
VMP1-214ENST00000592106 NOVP48745 357 aa11.93□□□□□ -0.5
VMP1-214ENST00000592106 NKX3-2P78367 333 aa11.93□□□□□ -0.5
VMP1-214ENST00000592106 FAAP100Q0VG06 881 aa11.93□□□□□ -0.5
VMP1-214ENST00000592106 NMIQ13287 307 aaPredicted RBP11.93□□□□□ -0.5
VMP1-214ENST00000592106 PPIGQ13427 754 aaKnown RBP eCLIP11.93□□□□□ -0.5
VMP1-214ENST00000592106 PWP2Q15269 919 aaKnown RBP11.93□□□□□ -0.5
VMP1-214ENST00000592106 CCDC178Q5BJE1 867 aa11.93□□□□□ -0.5
VMP1-214ENST00000592106 CCSAPQ6IQ19 270 aaPredicted RBP11.93□□□□□ -0.5
VMP1-214ENST00000592106 MFSD6Q6ZSS7 791 aa11.93□□□□□ -0.5
VMP1-214ENST00000592106 TLK2Q86UE8 772 aa11.93□□□□□ -0.5
VMP1-214ENST00000592106 FAM227BQ96M60 508 aa11.93□□□□□ -0.5
VMP1-214ENST00000592106 RANBP17Q9H2T7 1088 aaKnown RBP11.93□□□□□ -0.5
VMP1-214ENST00000592106 VTA1Q9NP79 307 aa11.93□□□□□ -0.5
VMP1-214ENST00000592106 CYP39A1Q9NYL5 469 aa11.93□□□□□ -0.5
VMP1-214ENST00000592106 METRNQ9UJH8 293 aa11.93□□□□□ -0.5
VMP1-214ENST00000592106 LRRC37A2A6NM11 1700 aa11.93□□□□□ -0.5
VMP1-214ENST00000592106 MCM3APO60318 1980 aa11.92□□□□□ -0.5
VMP1-214ENST00000592106 B4DLN1 442 aa11.92□□□□□ -0.5
VMP1-214ENST00000592106 ARVCFO00192 962 aa11.92□□□□□ -0.5
VMP1-214ENST00000592106 TIMP1P01033 207 aa11.92□□□□□ -0.5
VMP1-214ENST00000592106 MRPL12P52815 198 aaKnown RBP11.92□□□□□ -0.5
VMP1-214ENST00000592106 AKNAD1Q5T1N1 836 aa11.92□□□□□ -0.5
VMP1-214ENST00000592106 IQSEC1Q6DN90 963 aa11.92□□□□□ -0.5
VMP1-214ENST00000592106 BTNL9Q6UXG8 535 aa11.92□□□□□ -0.5
VMP1-214ENST00000592106 TMEM199Q8N511 208 aa11.92□□□□□ -0.5
VMP1-214ENST00000592106 ESR2Q92731 530 aa11.92□□□□□ -0.5
VMP1-214ENST00000592106 FAM161BQ96MY7 647 aa11.92□□□□□ -0.5
VMP1-214ENST00000592106 TTC14Q96N46 770 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms