RNA–Protein interactions for RNA: ENST00000592023.5

ERCC1-213, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-213ENST00000592023 CDC37Q16543 378 aaPredicted RBP17.77■□□□□ 0.44
ERCC1-213ENST00000592023 USH1GQ495M9 461 aa17.77■□□□□ 0.44
ERCC1-213ENST00000592023 SLC30A10Q6XR72 485 aa17.77■□□□□ 0.44
ERCC1-213ENST00000592023 KIAA1211Q6ZU35 1233 aa17.77■□□□□ 0.44
ERCC1-213ENST00000592023 NCOA7Q8NI08 942 aa17.77■□□□□ 0.44
ERCC1-213ENST00000592023 MAP4K1Q92918 833 aa17.77■□□□□ 0.44
ERCC1-213ENST00000592023 CCDC136Q96JN2 1154 aa17.77■□□□□ 0.44
ERCC1-213ENST00000592023 PURBQ96QR8 312 aaKnown RBP17.77■□□□□ 0.44
ERCC1-213ENST00000592023 FAM184BQ9ULE4 1060 aa17.77■□□□□ 0.44
ERCC1-213ENST00000592023 PTPDC1A2A3K4 754 aa17.76■□□□□ 0.43
ERCC1-213ENST00000592023 ADCYAP1R1P41586 468 aa17.76■□□□□ 0.43
ERCC1-213ENST00000592023 RNF180Q86T96 592 aa17.76■□□□□ 0.43
ERCC1-213ENST00000592023 FERMT2Q96AC1 680 aa17.76■□□□□ 0.43
ERCC1-213ENST00000592023 LSG1Q9H089 658 aaKnown RBP17.76■□□□□ 0.43
ERCC1-213ENST00000592023 ABHD16BQ9H3Z7 469 aa17.76■□□□□ 0.43
ERCC1-213ENST00000592023 RBM27Q9P2N5 1060 aaKnown RBP17.76■□□□□ 0.43
ERCC1-213ENST00000592023 ERICH2A1L162 156 aa17.75■□□□□ 0.43
ERCC1-213ENST00000592023 ASB14A6NK59 587 aa17.75■□□□□ 0.43
ERCC1-213ENST00000592023 IFIT3O14879 490 aaKnown RBP17.75■□□□□ 0.43
ERCC1-213ENST00000592023 ADCY6O43306 1168 aa17.75■□□□□ 0.43
ERCC1-213ENST00000592023 ADAMTS4O75173 837 aa17.75■□□□□ 0.43
ERCC1-213ENST00000592023 RTP1P59025 263 aa17.75■□□□□ 0.43
ERCC1-213ENST00000592023 BAATQ14032 418 aaPredicted RBP17.75■□□□□ 0.43
ERCC1-213ENST00000592023 CCDC144BQ3MJ40 725 aa17.75■□□□□ 0.43
ERCC1-213ENST00000592023 CHST3Q7LGC8 479 aa17.75■□□□□ 0.43
ERCC1-213ENST00000592023 ADGRF4Q8IZF3 695 aa17.75■□□□□ 0.43
ERCC1-213ENST00000592023 CLEC4DQ8WXI8 215 aa17.75■□□□□ 0.43
ERCC1-213ENST00000592023 KATNBL1Q9H079 304 aa17.75■□□□□ 0.43
ERCC1-213ENST00000592023 ANO2Q9NQ90 1003 aa17.75■□□□□ 0.43
ERCC1-213ENST00000592023 PNMA2Q9UL42 364 aa17.75■□□□□ 0.43
ERCC1-213ENST00000592023 MYH6P13533 1939 aa17.74■□□□□ 0.43
ERCC1-213ENST00000592023 CALML3P27482 149 aa17.74■□□□□ 0.43
ERCC1-213ENST00000592023 FBXO16Q8IX29 292 aaPredicted RBP17.74■□□□□ 0.43
ERCC1-213ENST00000592023 STAG2Q8N3U4 1231 aa17.74■□□□□ 0.43
ERCC1-213ENST00000592023 SENP2Q9HC62 589 aa17.74■□□□□ 0.43
ERCC1-213ENST00000592023 PHF24Q9UPV7 400 aa17.74■□□□□ 0.43
ERCC1-213ENST00000592023 ATP11BQ9Y2G3 1177 aa17.74■□□□□ 0.43
ERCC1-213ENST00000592023 CEP290O15078 2479 aa17.74■□□□□ 0.43
ERCC1-213ENST00000592023 MYADML2A6NDP7 307 aa17.73■□□□□ 0.43
ERCC1-213ENST00000592023 DUSP11O75319 330 aaKnown RBP17.73■□□□□ 0.43
ERCC1-213ENST00000592023 SLC34A2O95436 690 aa17.73■□□□□ 0.43
ERCC1-213ENST00000592023 NEFLP07196 543 aa17.73■□□□□ 0.43
ERCC1-213ENST00000592023 ALDH5A1P51649 535 aaPredicted RBP17.73■□□□□ 0.43
ERCC1-213ENST00000592023 ANTXR2P58335 489 aa17.73■□□□□ 0.43
ERCC1-213ENST00000592023 WTAPQ15007 396 aa17.73■□□□□ 0.43
ERCC1-213ENST00000592023 SART3Q15020 963 aaKnown RBP17.73■□□□□ 0.43
ERCC1-213ENST00000592023 QRICH1Q2TAL8 776 aa17.73■□□□□ 0.43
ERCC1-213ENST00000592023 TMEM67Q5HYA8 995 aa17.73■□□□□ 0.43
ERCC1-213ENST00000592023 RNF207Q6ZRF8 634 aa17.73■□□□□ 0.43
ERCC1-213ENST00000592023 EEPD1Q7L9B9 569 aa17.73■□□□□ 0.43
ERCC1-213ENST00000592023 MB21D2Q8IYB1 491 aaPredicted RBP17.73■□□□□ 0.43
ERCC1-213ENST00000592023 PRO3102Q9H379 93 aa17.73■□□□□ 0.43
ERCC1-213ENST00000592023 VAT1LQ9HCJ6 419 aa17.73■□□□□ 0.43
ERCC1-213ENST00000592023 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.72■□□□□ 0.43
ERCC1-213ENST00000592023 A0A1W2PQ45 241 aaPredicted RBP17.72■□□□□ 0.43
ERCC1-213ENST00000592023 A0A1W2PQY0 241 aa17.72■□□□□ 0.43
ERCC1-213ENST00000592023 SLC27A2O14975 620 aa17.72■□□□□ 0.43
ERCC1-213ENST00000592023 C6orf222P0C671 652 aaPredicted RBP17.72■□□□□ 0.43
ERCC1-213ENST00000592023 IRX5P78411 483 aaPredicted RBP17.72■□□□□ 0.43
ERCC1-213ENST00000592023 TRIM60Q495X7 471 aa17.72■□□□□ 0.43
ERCC1-213ENST00000592023 SLC39A5Q6ZMH5 540 aa17.72■□□□□ 0.43
ERCC1-213ENST00000592023 JMJD4Q9H9V9 463 aa17.72■□□□□ 0.43
ERCC1-213ENST00000592023 ADD3Q9UEY8 706 aaKnown RBP17.72■□□□□ 0.43
ERCC1-213ENST00000592023 ABCB11O95342 1321 aa17.72■□□□□ 0.43
ERCC1-213ENST00000592023 LTBP2Q14767 1821 aa17.71■□□□□ 0.43
ERCC1-213ENST00000592023 KLRF2D3W0D1 207 aa17.71■□□□□ 0.43
ERCC1-213ENST00000592023 CDC45O75419 566 aa17.71■□□□□ 0.43
ERCC1-213ENST00000592023 MAGEA10P43363 369 aaPredicted RBP17.71■□□□□ 0.43
ERCC1-213ENST00000592023 RPS6P62753 249 aaKnown RBP17.71■□□□□ 0.43
ERCC1-213ENST00000592023 GRM4Q14833 912 aa17.71■□□□□ 0.43
ERCC1-213ENST00000592023 NOL8Q76FK4 1167 aaKnown RBP17.71■□□□□ 0.43
ERCC1-213ENST00000592023 GDF15Q99988 308 aa17.71■□□□□ 0.43
ERCC1-213ENST00000592023 SPC25Q9HBM1 224 aa17.71■□□□□ 0.43
ERCC1-213ENST00000592023 MAD2L2Q9UI95 211 aa17.71■□□□□ 0.43
ERCC1-213ENST00000592023 PTGS1P23219 599 aa17.7■□□□□ 0.42
ERCC1-213ENST00000592023 FXR1P51114 621 aaKnown RBP eCLIP17.7■□□□□ 0.42
ERCC1-213ENST00000592023 ACLYP53396 1101 aa17.7■□□□□ 0.42
ERCC1-213ENST00000592023 TNFAIP2Q03169 654 aa17.7■□□□□ 0.42
ERCC1-213ENST00000592023 SNX17Q15036 470 aa17.7■□□□□ 0.42
ERCC1-213ENST00000592023 CREB3L3Q68CJ9 461 aa17.7■□□□□ 0.42
ERCC1-213ENST00000592023 CASC1Q6TDU7 716 aa17.7■□□□□ 0.42
ERCC1-213ENST00000592023 FBXO11Q86XK2 927 aa17.7■□□□□ 0.42
ERCC1-213ENST00000592023 KLHDC9Q8NEP7 349 aa17.7■□□□□ 0.42
ERCC1-213ENST00000592023 MORC4Q8TE76 937 aa17.7■□□□□ 0.42
ERCC1-213ENST00000592023 UPF3AQ9H1J1 476 aaKnown RBP17.7■□□□□ 0.42
ERCC1-213ENST00000592023 PRDM5Q9NQX1 630 aaPredicted RBP17.7■□□□□ 0.42
ERCC1-213ENST00000592023 PDGFCQ9NRA1 345 aa17.7■□□□□ 0.42
ERCC1-213ENST00000592023 PALM3A6NDB9 673 aaPredicted RBP17.69■□□□□ 0.42
ERCC1-213ENST00000592023 PRC1O43663 620 aa17.69■□□□□ 0.42
ERCC1-213ENST00000592023 CST5P28325 142 aaPredicted RBP17.69■□□□□ 0.42
ERCC1-213ENST00000592023 GJA9P57773 515 aa17.69■□□□□ 0.42
ERCC1-213ENST00000592023 MDM2Q00987 491 aaPredicted RBP17.69■□□□□ 0.42
ERCC1-213ENST00000592023 KCNA10Q16322 511 aa17.69■□□□□ 0.42
ERCC1-213ENST00000592023 TLK2Q86UE8 772 aa17.69■□□□□ 0.42
ERCC1-213ENST00000592023 HOMER1Q86YM7 354 aa17.69■□□□□ 0.42
ERCC1-213ENST00000592023 TSEN34Q9BSV6 310 aaKnown RBP17.69■□□□□ 0.42
ERCC1-213ENST00000592023 VTA1Q9NP79 307 aa17.69■□□□□ 0.42
ERCC1-213ENST00000592023 GPHNQ9NQX3 736 aaPredicted RBP17.69■□□□□ 0.42
ERCC1-213ENST00000592023 STARD7Q9NQZ5 370 aa17.69■□□□□ 0.42
ERCC1-213ENST00000592023 PRKAG2Q9UGJ0 569 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms