RNA–Protein interactions for RNA: ENST00000591316.1

CROCCP3-205, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 5

Gene CROCCP3, Length 1,563 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-205ENST00000591316 PFKFB3Q16875 520 aaPredicted RBP21.18■□□□□ 0.98
CROCCP3-205ENST00000591316 AIFM3Q96NN9 605 aa21.18■□□□□ 0.98
CROCCP3-205ENST00000591316 LLPHQ9BRT6 129 aaKnown RBP21.18■□□□□ 0.98
CROCCP3-205ENST00000591316 MROH8Q9H579 483 aa21.18■□□□□ 0.98
CROCCP3-205ENST00000591316 PNMA2Q9UL42 364 aa21.18■□□□□ 0.98
CROCCP3-205ENST00000591316 COL11A1P12107 1806 aaPredicted RBP21.17■□□□□ 0.98
CROCCP3-205ENST00000591316 FDPSP14324 419 aaKnown RBP21.17■□□□□ 0.98
CROCCP3-205ENST00000591316 MAPK4P31152 587 aa21.17■□□□□ 0.98
CROCCP3-205ENST00000591316 WWC2Q6AWC2 1192 aa21.17■□□□□ 0.98
CROCCP3-205ENST00000591316 GPR142Q7Z601 462 aa21.17■□□□□ 0.98
CROCCP3-205ENST00000591316 SPRYD3Q8NCJ5 442 aa21.17■□□□□ 0.98
CROCCP3-205ENST00000591316 RBM27Q9P2N5 1060 aaKnown RBP21.17■□□□□ 0.98
CROCCP3-205ENST00000591316 MRPL11Q9Y3B7 192 aaKnown RBP21.17■□□□□ 0.98
CROCCP3-205ENST00000591316 TNPO2O14787 897 aaKnown RBP21.16■□□□□ 0.98
CROCCP3-205ENST00000591316 LBX1P52954 281 aa21.16■□□□□ 0.98
CROCCP3-205ENST00000591316 FOSBP53539 338 aa21.16■□□□□ 0.98
CROCCP3-205ENST00000591316 FCGRTP55899 365 aa21.16■□□□□ 0.98
CROCCP3-205ENST00000591316 CAP1Q01518 475 aa21.16■□□□□ 0.98
CROCCP3-205ENST00000591316 TRAF1Q13077 416 aa21.16■□□□□ 0.98
CROCCP3-205ENST00000591316 TKFCQ3LXA3 575 aa21.16■□□□□ 0.98
CROCCP3-205ENST00000591316 NSMFQ6X4W1 530 aa21.16■□□□□ 0.98
CROCCP3-205ENST00000591316 PLEKHH3Q7Z736 793 aa21.16■□□□□ 0.98
CROCCP3-205ENST00000591316 SHCBP1Q8NEM2 672 aa21.16■□□□□ 0.98
CROCCP3-205ENST00000591316 CHST13Q8NET6 341 aa21.16■□□□□ 0.98
CROCCP3-205ENST00000591316 TBC1D5Q92609 795 aa21.16■□□□□ 0.98
CROCCP3-205ENST00000591316 ACAD9Q9H845 621 aa21.16■□□□□ 0.98
CROCCP3-205ENST00000591316 TSHZ2Q9NRE2 1034 aa21.16■□□□□ 0.98
CROCCP3-205ENST00000591316 IVNS1ABPQ9Y6Y0 642 aa21.16■□□□□ 0.98
CROCCP3-205ENST00000591316 ABCB11O95342 1321 aa21.16■□□□□ 0.98
CROCCP3-205ENST00000591316 NFIBO00712 420 aa21.15■□□□□ 0.98
CROCCP3-205ENST00000591316 HSPA8P11142 646 aaKnown RBP21.15■□□□□ 0.98
CROCCP3-205ENST00000591316 NAPAP54920 295 aa21.15■□□□□ 0.98
CROCCP3-205ENST00000591316 CUL4AQ13619 759 aa21.15■□□□□ 0.98
CROCCP3-205ENST00000591316 ANKRD35Q8N283 1001 aa21.15■□□□□ 0.98
CROCCP3-205ENST00000591316 CLEC4DQ8WXI8 215 aa21.15■□□□□ 0.98
CROCCP3-205ENST00000591316 TRIM47Q96LD4 638 aa21.15■□□□□ 0.98
CROCCP3-205ENST00000591316 VPS54Q9P1Q0 977 aa21.15■□□□□ 0.98
CROCCP3-205ENST00000591316 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.15■□□□□ 0.98
CROCCP3-205ENST00000591316 HSP90AA1P07900 732 aaKnown RBP21.14■□□□□ 0.98
CROCCP3-205ENST00000591316 FCER1AP12319 257 aa21.14■□□□□ 0.98
CROCCP3-205ENST00000591316 COPB2P35606 906 aa21.14■□□□□ 0.98
CROCCP3-205ENST00000591316 CTCFP49711 727 aaPredicted RBP21.14■□□□□ 0.98
CROCCP3-205ENST00000591316 TYW1BQ6NUM6 668 aa21.14■□□□□ 0.98
CROCCP3-205ENST00000591316 FAM184AQ8NB25 1140 aa21.14■□□□□ 0.98
CROCCP3-205ENST00000591316 SMARCC2Q8TAQ2 1214 aa21.14■□□□□ 0.98
CROCCP3-205ENST00000591316 ERO1AQ96HE7 468 aa21.14■□□□□ 0.98
CROCCP3-205ENST00000591316 MMP19Q99542 508 aa21.14■□□□□ 0.98
CROCCP3-205ENST00000591316 ALG1Q9BT22 464 aa21.14■□□□□ 0.98
CROCCP3-205ENST00000591316 BARHL2Q9NY43 387 aa21.14■□□□□ 0.98
CROCCP3-205ENST00000591316 FBXO40Q9UH90 709 aa21.14■□□□□ 0.98
CROCCP3-205ENST00000591316 SMC3Q9UQE7 1217 aa21.14■□□□□ 0.98
CROCCP3-205ENST00000591316 SMCHD1A6NHR9 2005 aa21.14■□□□□ 0.97
CROCCP3-205ENST00000591316 STXBP3O00186 592 aa21.14■□□□□ 0.97
CROCCP3-205ENST00000591316 CFBP00751 764 aa21.14■□□□□ 0.97
CROCCP3-205ENST00000591316 KCTD2Q14681 263 aa21.14■□□□□ 0.97
CROCCP3-205ENST00000591316 NOM1Q5C9Z4 860 aaKnown RBP21.14■□□□□ 0.97
CROCCP3-205ENST00000591316 GJB4Q9NTQ9 266 aa21.14■□□□□ 0.97
CROCCP3-205ENST00000591316 STK36Q9NRP7 1315 aa21.13■□□□□ 0.97
CROCCP3-205ENST00000591316 SMCO2A6NFE2 343 aa21.13■□□□□ 0.97
CROCCP3-205ENST00000591316 PTPREP23469 700 aa21.13■□□□□ 0.97
CROCCP3-205ENST00000591316 HMGN5P82970 282 aaKnown RBP21.13■□□□□ 0.97
CROCCP3-205ENST00000591316 BECN1Q14457 450 aa21.13■□□□□ 0.97
CROCCP3-205ENST00000591316 WASF1Q92558 559 aa21.13■□□□□ 0.97
CROCCP3-205ENST00000591316 A0A0G2JMZ2 1700 aa21.13■□□□□ 0.97
CROCCP3-205ENST00000591316 STRNO43815 780 aa21.12■□□□□ 0.97
CROCCP3-205ENST00000591316 PGK2P07205 417 aa21.12■□□□□ 0.97
CROCCP3-205ENST00000591316 CALML3P27482 149 aa21.12■□□□□ 0.97
CROCCP3-205ENST00000591316 GJB2P29033 226 aa21.12■□□□□ 0.97
CROCCP3-205ENST00000591316 BAATQ14032 418 aaPredicted RBP21.12■□□□□ 0.97
CROCCP3-205ENST00000591316 RNF207Q6ZRF8 634 aa21.12■□□□□ 0.97
CROCCP3-205ENST00000591316 MCF2L2Q86YR7 1114 aa21.12■□□□□ 0.97
CROCCP3-205ENST00000591316 PSTPIP2Q9H939 334 aa21.12■□□□□ 0.97
CROCCP3-205ENST00000591316 A1CFQ9NQ94 594 aaKnown RBP21.12■□□□□ 0.97
CROCCP3-205ENST00000591316 RBM19Q9Y4C8 960 aaKnown RBP21.12■□□□□ 0.97
CROCCP3-205ENST00000591316 OPLAHO14841 1288 aa21.11■□□□□ 0.97
CROCCP3-205ENST00000591316 HOXA13P31271 388 aaPredicted RBP21.11■□□□□ 0.97
CROCCP3-205ENST00000591316 NLRP5P59047 1200 aa21.11■□□□□ 0.97
CROCCP3-205ENST00000591316 PURBQ96QR8 312 aaKnown RBP21.11■□□□□ 0.97
CROCCP3-205ENST00000591316 KCNJ14Q9UNX9 436 aa21.11■□□□□ 0.97
CROCCP3-205ENST00000591316 hCG_1984214I3L0E3 225 aa21.1■□□□□ 0.97
CROCCP3-205ENST00000591316 ADORA2AP29274 412 aa21.1■□□□□ 0.97
CROCCP3-205ENST00000591316 ANP32AP39687 249 aaKnown RBP21.1■□□□□ 0.97
CROCCP3-205ENST00000591316 DPP9Q86TI2 863 aa21.1■□□□□ 0.97
CROCCP3-205ENST00000591316 ZNF713Q8N859 430 aaPredicted RBP21.1■□□□□ 0.97
CROCCP3-205ENST00000591316 SHISA4Q96DD7 197 aa21.1■□□□□ 0.97
CROCCP3-205ENST00000591316 NUDT12Q9BQG2 462 aa21.1■□□□□ 0.97
CROCCP3-205ENST00000591316 GABRQQ9UN88 632 aa21.1■□□□□ 0.97
CROCCP3-205ENST00000591316 MYH6P13533 1939 aa21.1■□□□□ 0.97
CROCCP3-205ENST00000591316 XBP1P17861 261 aa21.1■□□□□ 0.97
CROCCP3-205ENST00000591316 CYP2B6P20813 491 aa21.1■□□□□ 0.97
CROCCP3-205ENST00000591316 HOXD10P28358 340 aa21.1■□□□□ 0.97
CROCCP3-205ENST00000591316 RPS6P62753 249 aaKnown RBP21.1■□□□□ 0.97
CROCCP3-205ENST00000591316 GUCY1B3Q02153 619 aa21.1■□□□□ 0.97
CROCCP3-205ENST00000591316 ARHGEF6Q15052 776 aa21.1■□□□□ 0.97
CROCCP3-205ENST00000591316 USP17L6PQ6QN14 398 aa21.1■□□□□ 0.97
CROCCP3-205ENST00000591316 CCDC12Q8WUD4 166 aaPredicted RBP21.1■□□□□ 0.97
CROCCP3-205ENST00000591316 CYP39A1Q9NYL5 469 aa21.1■□□□□ 0.97
CROCCP3-205ENST00000591316 GJD2Q9UKL4 321 aa21.1■□□□□ 0.97
CROCCP3-205ENST00000591316 TRIM17Q9Y577 477 aa21.1■□□□□ 0.97
CROCCP3-205ENST00000591316 SLC15A5A6NIM6 579 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms