RNA–Protein interactions for RNA: ENST00000590834.5

RUNDC3A-205, Transcript of RUN domain containing 3A, humanhuman

TSL 2

Gene RUNDC3A, Length 2,373 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-205ENST00000590834 PP2D1A8MPX8 630 aa25.22■■□□□ 1.63
RUNDC3A-205ENST00000590834 SMTNL1A8MU46 457 aa25.22■■□□□ 1.63
RUNDC3A-205ENST00000590834 TMEM232C9JQI7 657 aa25.22■■□□□ 1.63
RUNDC3A-205ENST00000590834 MMP14P50281 582 aa25.22■■□□□ 1.63
RUNDC3A-205ENST00000590834 MAP3K10Q02779 954 aa25.22■■□□□ 1.63
RUNDC3A-205ENST00000590834 ORC2Q13416 577 aaPredicted RBP25.22■■□□□ 1.63
RUNDC3A-205ENST00000590834 KIAA1755Q5JYT7 1200 aa25.22■■□□□ 1.63
RUNDC3A-205ENST00000590834 SPICE1Q8N0Z3 855 aa25.22■■□□□ 1.63
RUNDC3A-205ENST00000590834 TRIML1Q8N9V2 468 aa25.22■■□□□ 1.63
RUNDC3A-205ENST00000590834 PYM1Q9BRP8 204 aaKnown RBP25.22■■□□□ 1.63
RUNDC3A-205ENST00000590834 PSTPIP2Q9H939 334 aa25.22■■□□□ 1.63
RUNDC3A-205ENST00000590834 ARHGEF10LQ9HCE6 1279 aa25.22■■□□□ 1.63
RUNDC3A-205ENST00000590834 FRMD4AQ9P2Q2 1039 aaPredicted RBP25.22■■□□□ 1.63
RUNDC3A-205ENST00000590834 TMX2Q9Y320 296 aa25.22■■□□□ 1.63
RUNDC3A-205ENST00000590834 PCDHA1Q9Y5I3 950 aa25.22■■□□□ 1.63
RUNDC3A-205ENST00000590834 FZD9O00144 591 aa25.22■■□□□ 1.63
RUNDC3A-205ENST00000590834 MRPL12P52815 198 aaKnown RBP25.22■■□□□ 1.63
RUNDC3A-205ENST00000590834 DPYDQ12882 1025 aa25.22■■□□□ 1.63
RUNDC3A-205ENST00000590834 HSD3B7Q9H2F3 369 aa25.22■■□□□ 1.63
RUNDC3A-205ENST00000590834 KARSQ15046 597 aaKnown RBP25.21■■□□□ 1.63
RUNDC3A-205ENST00000590834 SYDE2Q5VT97 1194 aa25.21■■□□□ 1.63
RUNDC3A-205ENST00000590834 BTNL9Q6UXG8 535 aa25.21■■□□□ 1.63
RUNDC3A-205ENST00000590834 POTEDQ86YR6 584 aa25.21■■□□□ 1.63
RUNDC3A-205ENST00000590834 MRFAP1L1Q96HT8 127 aa25.21■■□□□ 1.63
RUNDC3A-205ENST00000590834 CDC25BP30305 580 aa25.2■■□□□ 1.63
RUNDC3A-205ENST00000590834 TXLNAP40222 546 aa25.2■■□□□ 1.63
RUNDC3A-205ENST00000590834 GMPSP49915 693 aaPredicted RBP25.2■■□□□ 1.63
RUNDC3A-205ENST00000590834 SNAP25P60880 206 aa25.2■■□□□ 1.63
RUNDC3A-205ENST00000590834 RASA3Q14644 834 aa25.2■■□□□ 1.63
RUNDC3A-205ENST00000590834 MTRQ99707 1265 aa25.2■■□□□ 1.63
RUNDC3A-205ENST00000590834 TTC12Q9H892 705 aaPredicted RBP25.2■■□□□ 1.63
RUNDC3A-205ENST00000590834 SMC2O95347 1197 aa25.2■■□□□ 1.62
RUNDC3A-205ENST00000590834 CAP2P40123 477 aa25.2■■□□□ 1.62
RUNDC3A-205ENST00000590834 TNNI2P48788 182 aa25.2■■□□□ 1.62
RUNDC3A-205ENST00000590834 STAMQ92783 540 aa25.2■■□□□ 1.62
RUNDC3A-205ENST00000590834 DISC1Q9NRI5 854 aa25.2■■□□□ 1.62
RUNDC3A-205ENST00000590834 MICALL2Q8IY33 904 aa25.19■■□□□ 1.62
RUNDC3A-205ENST00000590834 CCSER1Q9C0I3 900 aa25.19■■□□□ 1.62
RUNDC3A-205ENST00000590834 TDP2O95551 362 aa25.19■■□□□ 1.62
RUNDC3A-205ENST00000590834 MYL5Q02045 173 aa25.19■■□□□ 1.62
RUNDC3A-205ENST00000590834 IKQ13123 557 aaPredicted RBP25.19■■□□□ 1.62
RUNDC3A-205ENST00000590834 MLKLQ8NB16 471 aa25.19■■□□□ 1.62
RUNDC3A-205ENST00000590834 MTMR9Q96QG7 549 aa25.19■■□□□ 1.62
RUNDC3A-205ENST00000590834 GOLGA6L6A8MZA4 724 aa25.18■■□□□ 1.62
RUNDC3A-205ENST00000590834 SLC37A4O43826 429 aa25.18■■□□□ 1.62
RUNDC3A-205ENST00000590834 SAMD7Q7Z3H4 446 aa25.18■■□□□ 1.62
RUNDC3A-205ENST00000590834 DPF2Q92785 391 aa25.18■■□□□ 1.62
RUNDC3A-205ENST00000590834 TEPSINQ96N21 525 aa25.18■■□□□ 1.62
RUNDC3A-205ENST00000590834 GJA3Q9Y6H8 435 aa25.18■■□□□ 1.62
RUNDC3A-205ENST00000590834 NAALADL2Q58DX5 795 aa25.18■■□□□ 1.62
RUNDC3A-205ENST00000590834 AK8Q96MA6 479 aa25.18■■□□□ 1.62
RUNDC3A-205ENST00000590834 AMNQ9BXJ7 453 aa25.18■■□□□ 1.62
RUNDC3A-205ENST00000590834 USP17L15C9J2P7 530 aa25.17■■□□□ 1.62
RUNDC3A-205ENST00000590834 USP17L13C9JLJ4 530 aa25.17■■□□□ 1.62
RUNDC3A-205ENST00000590834 USP17L11C9JVI0 530 aa25.17■■□□□ 1.62
RUNDC3A-205ENST00000590834 USP17L18D6R9N7 530 aa25.17■■□□□ 1.62
RUNDC3A-205ENST00000590834 USP17L22D6RA61 530 aa25.17■■□□□ 1.62
RUNDC3A-205ENST00000590834 USP17L17D6RBQ6 530 aa25.17■■□□□ 1.62
RUNDC3A-205ENST00000590834 USP17L19D6RCP7 530 aa25.17■■□□□ 1.62
RUNDC3A-205ENST00000590834 USP17L20D6RJB6 530 aa25.17■■□□□ 1.62
RUNDC3A-205ENST00000590834 UBA7P41226 1012 aa25.17■■□□□ 1.62
RUNDC3A-205ENST00000590834 USP17L24Q0WX57 530 aa25.17■■□□□ 1.62
RUNDC3A-205ENST00000590834 USP17L6PQ6QN14 398 aa25.17■■□□□ 1.62
RUNDC3A-205ENST00000590834 DRC7Q8IY82 874 aa25.17■■□□□ 1.62
RUNDC3A-205ENST00000590834 GSDMAQ96QA5 445 aa25.17■■□□□ 1.62
RUNDC3A-205ENST00000590834 NRBP1Q9UHY1 535 aa25.17■■□□□ 1.62
RUNDC3A-205ENST00000590834 ASTN2O75129 1339 aaPredicted RBP25.17■■□□□ 1.62
RUNDC3A-205ENST00000590834 STAT6P42226 847 aa25.17■■□□□ 1.62
RUNDC3A-205ENST00000590834 GLT8D2Q9H1C3 349 aa25.17■■□□□ 1.62
RUNDC3A-205ENST00000590834 GOPCQ9HD26 462 aa25.17■■□□□ 1.62
RUNDC3A-205ENST00000590834 CNOT7Q9UIV1 285 aaKnown RBP25.17■■□□□ 1.62
RUNDC3A-205ENST00000590834 PRR12Q9ULL5 1215 aa25.17■■□□□ 1.62
RUNDC3A-205ENST00000590834 LMOD1P29536 600 aaPredicted RBP25.16■■□□□ 1.62
RUNDC3A-205ENST00000590834 TPM4P67936 248 aa25.16■■□□□ 1.62
RUNDC3A-205ENST00000590834 BLZF1Q9H2G9 400 aa25.16■■□□□ 1.62
RUNDC3A-205ENST00000590834 KCNF1Q9H3M0 494 aa25.16■■□□□ 1.62
RUNDC3A-205ENST00000590834 MYH7BA7E2Y1 1941 aa25.16■■□□□ 1.62
RUNDC3A-205ENST00000590834 ZNF500O60304 480 aaPredicted RBP25.16■■□□□ 1.62
RUNDC3A-205ENST00000590834 TECP42680 631 aa25.16■■□□□ 1.62
RUNDC3A-205ENST00000590834 CALCRLQ16602 461 aa25.16■■□□□ 1.62
RUNDC3A-205ENST00000590834 PPP4R3AQ6IN85 833 aa25.16■■□□□ 1.62
RUNDC3A-205ENST00000590834 FBXO11Q86XK2 927 aa25.16■■□□□ 1.62
RUNDC3A-205ENST00000590834 ZNF541Q9H0D2 1346 aa25.15■■□□□ 1.62
RUNDC3A-205ENST00000590834 PHF20L1A8MW92 1017 aa25.15■■□□□ 1.62
RUNDC3A-205ENST00000590834 MEIS2O14770 477 aa25.15■■□□□ 1.62
RUNDC3A-205ENST00000590834 STAT2P52630 851 aa25.15■■□□□ 1.62
RUNDC3A-205ENST00000590834 FMR1Q06787 632 aaKnown RBP eCLIP25.15■■□□□ 1.62
RUNDC3A-205ENST00000590834 CUL4BQ13620 913 aa25.15■■□□□ 1.62
RUNDC3A-205ENST00000590834 TNFAIP1Q13829 316 aa25.15■■□□□ 1.62
RUNDC3A-205ENST00000590834 TBC1D10BQ4KMP7 808 aaPredicted RBP25.15■■□□□ 1.62
RUNDC3A-205ENST00000590834 FAM83BQ5T0W9 1011 aa25.15■■□□□ 1.62
RUNDC3A-205ENST00000590834 IGSF22Q8N9C0 903 aa25.15■■□□□ 1.62
RUNDC3A-205ENST00000590834 LRRC15Q8TF66 581 aa25.15■■□□□ 1.62
RUNDC3A-205ENST00000590834 GLIS2Q9BZE0 524 aaPredicted RBP25.15■■□□□ 1.62
RUNDC3A-205ENST00000590834 DACH1Q9UI36 760 aa25.15■■□□□ 1.62
RUNDC3A-205ENST00000590834 GTPBP6O43824 516 aaPredicted RBP25.15■■□□□ 1.62
RUNDC3A-205ENST00000590834 TPM3P06753 285 aa25.15■■□□□ 1.62
RUNDC3A-205ENST00000590834 PTGS1P23219 599 aa25.15■■□□□ 1.62
RUNDC3A-205ENST00000590834 RRAGBQ5VZM2 374 aa25.15■■□□□ 1.62
RUNDC3A-205ENST00000590834 CCDC186Q7Z3E2 898 aa25.15■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms