RNA–Protein interactions for RNA: ENST00000590830.5

MBD3-208, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best)

Gene MBD3, Length 1,035 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-208ENST00000590830 DPF3Q92784 378 aa26.09■■□□□ 1.77
MBD3-208ENST00000590830 C11orf49Q9H6J7 331 aa26.09■■□□□ 1.77
MBD3-208ENST00000590830 CDKN2AIPQ9NXV6 580 aaPredicted RBP26.09■■□□□ 1.77
MBD3-208ENST00000590830 PFASO15067 1338 aa26.09■■□□□ 1.77
MBD3-208ENST00000590830 KLRF2D3W0D1 207 aa26.08■■□□□ 1.77
MBD3-208ENST00000590830 MCM5P33992 734 aa26.08■■□□□ 1.77
MBD3-208ENST00000590830 GRM4Q14833 912 aa26.08■■□□□ 1.77
MBD3-208ENST00000590830 SART3Q15020 963 aaKnown RBP26.08■■□□□ 1.77
MBD3-208ENST00000590830 CCDC144CPQ8IYA2 1237 aa26.08■■□□□ 1.77
MBD3-208ENST00000590830 HTATIP2Q9BUP3 242 aa26.08■■□□□ 1.77
MBD3-208ENST00000590830 KATNBL1Q9H079 304 aa26.08■■□□□ 1.77
MBD3-208ENST00000590830 QRICH1Q2TAL8 776 aa26.07■■□□□ 1.76
MBD3-208ENST00000590830 ARMCX2Q7L311 632 aa26.07■■□□□ 1.76
MBD3-208ENST00000590830 MTA3Q9BTC8 594 aa26.07■■□□□ 1.76
MBD3-208ENST00000590830 CNPY2Q9Y2B0 182 aa26.07■■□□□ 1.76
MBD3-208ENST00000590830 SH2B2O14492 632 aaPredicted RBP26.06■■□□□ 1.76
MBD3-208ENST00000590830 ACVR2BQ13705 512 aa26.06■■□□□ 1.76
MBD3-208ENST00000590830 TSGA10IPQ3SY00 556 aa26.06■■□□□ 1.76
MBD3-208ENST00000590830 USH1GQ495M9 461 aa26.06■■□□□ 1.76
MBD3-208ENST00000590830 LENG1Q96BZ8 264 aaPredicted RBP26.06■■□□□ 1.76
MBD3-208ENST00000590830 MTMR8Q96EF0 704 aa26.06■■□□□ 1.76
MBD3-208ENST00000590830 PNMA2Q9UL42 364 aa26.06■■□□□ 1.76
MBD3-208ENST00000590830 H0YGN5 161 aa26.05■■□□□ 1.76
MBD3-208ENST00000590830 ADCK5Q3MIX3 580 aa26.05■■□□□ 1.76
MBD3-208ENST00000590830 GJC2Q5T442 439 aaPredicted RBP26.05■■□□□ 1.76
MBD3-208ENST00000590830 RNF20Q5VTR2 975 aa26.05■■□□□ 1.76
MBD3-208ENST00000590830 SLC30A10Q6XR72 485 aa26.05■■□□□ 1.76
MBD3-208ENST00000590830 TBC1D5Q92609 795 aa26.05■■□□□ 1.76
MBD3-208ENST00000590830 LRRC2Q9BYS8 371 aa26.05■■□□□ 1.76
MBD3-208ENST00000590830 DHX16O60231 1041 aaKnown RBP26.04■■□□□ 1.76
MBD3-208ENST00000590830 CATIPQ7Z7H3 387 aa26.04■■□□□ 1.76
MBD3-208ENST00000590830 KCNB2Q92953 911 aa26.04■■□□□ 1.76
MBD3-208ENST00000590830 TMEM87BQ96K49 555 aa26.04■■□□□ 1.76
MBD3-208ENST00000590830 MYL10Q9BUA6 226 aa26.04■■□□□ 1.76
MBD3-208ENST00000590830 ABHD16BQ9H3Z7 469 aa26.04■■□□□ 1.76
MBD3-208ENST00000590830 ZHX1Q9UKY1 873 aaPredicted RBP26.04■■□□□ 1.76
MBD3-208ENST00000590830 PTPDC1A2A3K4 754 aa26.03■■□□□ 1.76
MBD3-208ENST00000590830 DNM1LO00429 736 aa26.03■■□□□ 1.76
MBD3-208ENST00000590830 ADCY6O43306 1168 aa26.03■■□□□ 1.76
MBD3-208ENST00000590830 CYTH3O43739 400 aa26.03■■□□□ 1.76
MBD3-208ENST00000590830 PPP1R11O60927 126 aaPredicted RBP26.03■■□□□ 1.76
MBD3-208ENST00000590830 AKR1A1P14550 325 aa26.03■■□□□ 1.76
MBD3-208ENST00000590830 ZNF654Q8IZM8 581 aa26.03■■□□□ 1.76
MBD3-208ENST00000590830 ARRDC4Q8NCT1 418 aa26.03■■□□□ 1.76
MBD3-208ENST00000590830 NEK1Q96PY6 1258 aa26.03■■□□□ 1.76
MBD3-208ENST00000590830 RIOX1Q9H6W3 641 aa26.03■■□□□ 1.76
MBD3-208ENST00000590830 FAM184BQ9ULE4 1060 aa26.03■■□□□ 1.76
MBD3-208ENST00000590830 ASB14A6NK59 587 aa26.02■■□□□ 1.76
MBD3-208ENST00000590830 RARBP10826 455 aa26.02■■□□□ 1.76
MBD3-208ENST00000590830 CALML3P27482 149 aa26.02■■□□□ 1.76
MBD3-208ENST00000590830 RPS6P62753 249 aaKnown RBP26.02■■□□□ 1.76
MBD3-208ENST00000590830 EXOSC10Q01780 885 aaKnown RBP26.02■■□□□ 1.76
MBD3-208ENST00000590830 LRRC41Q15345 812 aa26.02■■□□□ 1.76
MBD3-208ENST00000590830 RNF207Q6ZRF8 634 aa26.02■■□□□ 1.76
MBD3-208ENST00000590830 FBXO11Q86XK2 927 aa26.02■■□□□ 1.76
MBD3-208ENST00000590830 RGS22Q8NE09 1264 aa26.02■■□□□ 1.76
MBD3-208ENST00000590830 MORC4Q8TE76 937 aa26.02■■□□□ 1.76
MBD3-208ENST00000590830 NUP133Q8WUM0 1156 aa26.02■■□□□ 1.76
MBD3-208ENST00000590830 XPNPEP3Q9NQH7 507 aa26.02■■□□□ 1.76
MBD3-208ENST00000590830 FRMPD3Q5JV73 1810 aa26.02■■□□□ 1.76
MBD3-208ENST00000590830 ABCB11O95342 1321 aa26.01■■□□□ 1.75
MBD3-208ENST00000590830 PGK1P00558 417 aa26.01■■□□□ 1.75
MBD3-208ENST00000590830 LIFRP42702 1097 aa26.01■■□□□ 1.75
MBD3-208ENST00000590830 CCDC144BQ3MJ40 725 aa26.01■■□□□ 1.75
MBD3-208ENST00000590830 MAP3K14Q99558 947 aa26.01■■□□□ 1.75
MBD3-208ENST00000590830 SENP6Q9GZR1 1112 aaPredicted RBP26.01■■□□□ 1.75
MBD3-208ENST00000590830 EVI5O60447 810 aa26■■□□□ 1.75
MBD3-208ENST00000590830 TMTC2Q8N394 836 aa26■■□□□ 1.75
MBD3-208ENST00000590830 TCEANC2Q96MN5 208 aa26■■□□□ 1.75
MBD3-208ENST00000590830 PIGSQ96S52 555 aa26■■□□□ 1.75
MBD3-208ENST00000590830 LCTP09848 1927 aa25.99■■□□□ 1.75
MBD3-208ENST00000590830 OPLAHO14841 1288 aa25.99■■□□□ 1.75
MBD3-208ENST00000590830 ZBTB5O15062 677 aa25.99■■□□□ 1.75
MBD3-208ENST00000590830 ADAMTS4O75173 837 aa25.99■■□□□ 1.75
MBD3-208ENST00000590830 DDAH1O94760 285 aa25.99■■□□□ 1.75
MBD3-208ENST00000590830 MYCNP04198 464 aaPredicted RBP25.99■■□□□ 1.75
MBD3-208ENST00000590830 HSPA4P34932 840 aa25.99■■□□□ 1.75
MBD3-208ENST00000590830 ALDH5A1P51649 535 aaPredicted RBP25.99■■□□□ 1.75
MBD3-208ENST00000590830 IRX5P78411 483 aaPredicted RBP25.99■■□□□ 1.75
MBD3-208ENST00000590830 LRRC26Q2I0M4 334 aa25.99■■□□□ 1.75
MBD3-208ENST00000590830 PDGFCQ9NRA1 345 aa25.99■■□□□ 1.75
MBD3-208ENST00000590830 C11orf97A0A1B0GVM6 126 aaPredicted RBP25.98■■□□□ 1.75
MBD3-208ENST00000590830 TMEM63BQ5T3F8 832 aa25.98■■□□□ 1.75
MBD3-208ENST00000590830 TAPT1Q6NXT6 567 aa25.98■■□□□ 1.75
MBD3-208ENST00000590830 NFXL1Q6ZNB6 911 aa25.98■■□□□ 1.75
MBD3-208ENST00000590830 DHX32Q7L7V1 743 aaKnown RBP25.98■■□□□ 1.75
MBD3-208ENST00000590830 EEPD1Q7L9B9 569 aa25.98■■□□□ 1.75
MBD3-208ENST00000590830 RAB11FIP4Q86YS3 637 aa25.98■■□□□ 1.75
MBD3-208ENST00000590830 AMNQ9BXJ7 453 aa25.98■■□□□ 1.75
MBD3-208ENST00000590830 COL20A1Q9P218 1284 aa25.98■■□□□ 1.75
MBD3-208ENST00000590830 ADD3Q9UEY8 706 aaKnown RBP25.98■■□□□ 1.75
MBD3-208ENST00000590830 MRPL11Q9Y3B7 192 aaKnown RBP25.98■■□□□ 1.75
MBD3-208ENST00000590830 SNX14Q9Y5W7 946 aa25.98■■□□□ 1.75
MBD3-208ENST00000590830 MCM3APO60318 1980 aa25.98■■□□□ 1.75
MBD3-208ENST00000590830 CCDC69A6NI79 296 aa25.97■■□□□ 1.75
MBD3-208ENST00000590830 DUSP11O75319 330 aaKnown RBP25.97■■□□□ 1.75
MBD3-208ENST00000590830 RXRAP19793 462 aa25.97■■□□□ 1.75
MBD3-208ENST00000590830 ADCYAP1R1P41586 468 aa25.97■■□□□ 1.75
MBD3-208ENST00000590830 SGMS1Q86VZ5 419 aa25.97■■□□□ 1.75
MBD3-208ENST00000590830 HOMER1Q86YM7 354 aa25.97■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms