RNA–Protein interactions for RNA: ENST00000590275.1

LRP3-202, Transcript of LDL receptor related protein 3, humanhuman

TSL 2

Gene LRP3, Length 1,078 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP3-202ENST00000590275 NCOA7Q8NI08 942 aa24.99■■□□□ 1.59
LRP3-202ENST00000590275 SENP6Q9GZR1 1112 aaPredicted RBP24.99■■□□□ 1.59
LRP3-202ENST00000590275 JMJD4Q9H9V9 463 aa24.99■■□□□ 1.59
LRP3-202ENST00000590275 ANO2Q9NQ90 1003 aa24.99■■□□□ 1.59
LRP3-202ENST00000590275 COLQQ9Y215 455 aaPredicted RBP24.99■■□□□ 1.59
LRP3-202ENST00000590275 TRDNQ13061 729 aa24.98■■□□□ 1.59
LRP3-202ENST00000590275 ACVR2BQ13705 512 aa24.98■■□□□ 1.59
LRP3-202ENST00000590275 CDC37Q16543 378 aaPredicted RBP24.98■■□□□ 1.59
LRP3-202ENST00000590275 ASPRV1Q53RT3 343 aa24.98■■□□□ 1.59
LRP3-202ENST00000590275 TMEM63BQ5T3F8 832 aa24.98■■□□□ 1.59
LRP3-202ENST00000590275 C7orf61Q8IZ16 206 aa24.98■■□□□ 1.59
LRP3-202ENST00000590275 TBC1D5Q92609 795 aa24.98■■□□□ 1.59
LRP3-202ENST00000590275 ZHX1Q9UKY1 873 aaPredicted RBP24.98■■□□□ 1.59
LRP3-202ENST00000590275 LCTP09848 1927 aa24.98■■□□□ 1.59
LRP3-202ENST00000590275 WDR19Q8NEZ3 1342 aa24.97■■□□□ 1.59
LRP3-202ENST00000590275 PALM3A6NDB9 673 aaPredicted RBP24.97■■□□□ 1.59
LRP3-202ENST00000590275 MYADML2A6NDP7 307 aa24.97■■□□□ 1.59
LRP3-202ENST00000590275 PARP1P09874 1014 aaKnown RBP24.97■■□□□ 1.59
LRP3-202ENST00000590275 KIAA1211Q6ZU35 1233 aa24.97■■□□□ 1.59
LRP3-202ENST00000590275 RALYLQ86SE5 291 aaKnown RBP24.97■■□□□ 1.59
LRP3-202ENST00000590275 VAT1LQ9HCJ6 419 aa24.97■■□□□ 1.59
LRP3-202ENST00000590275 CNPY2Q9Y2B0 182 aa24.97■■□□□ 1.59
LRP3-202ENST00000590275 C11orf97A0A1B0GVM6 126 aaPredicted RBP24.96■■□□□ 1.59
LRP3-202ENST00000590275 PPP1R11O60927 126 aaPredicted RBP24.96■■□□□ 1.59
LRP3-202ENST00000590275 ADAMTS4O75173 837 aa24.96■■□□□ 1.59
LRP3-202ENST00000590275 AKR1A1P14550 325 aa24.96■■□□□ 1.59
LRP3-202ENST00000590275 TROAPQ12815 778 aa24.96■■□□□ 1.59
LRP3-202ENST00000590275 QRICH1Q2TAL8 776 aa24.96■■□□□ 1.59
LRP3-202ENST00000590275 USH1GQ495M9 461 aa24.96■■□□□ 1.59
LRP3-202ENST00000590275 PRO3102Q9H379 93 aa24.96■■□□□ 1.59
LRP3-202ENST00000590275 XPNPEP3Q9NQH7 507 aa24.96■■□□□ 1.59
LRP3-202ENST00000590275 ZMYND8Q9ULU4 1186 aaPredicted RBP24.96■■□□□ 1.59
LRP3-202ENST00000590275 CDC45O75419 566 aa24.95■■□□□ 1.58
LRP3-202ENST00000590275 MYCNP04198 464 aaPredicted RBP24.95■■□□□ 1.58
LRP3-202ENST00000590275 ATN1P54259 1190 aaPredicted RBP24.95■■□□□ 1.58
LRP3-202ENST00000590275 GRM4Q14833 912 aa24.95■■□□□ 1.58
LRP3-202ENST00000590275 CCDC144BQ3MJ40 725 aa24.95■■□□□ 1.58
LRP3-202ENST00000590275 RASEFQ8IZ41 740 aa24.95■■□□□ 1.58
LRP3-202ENST00000590275 MTMR8Q96EF0 704 aa24.95■■□□□ 1.58
LRP3-202ENST00000590275 LY9Q9HBG7 655 aa24.95■■□□□ 1.58
LRP3-202ENST00000590275 PDGFCQ9NRA1 345 aa24.95■■□□□ 1.58
LRP3-202ENST00000590275 CEP290O15078 2479 aa24.95■■□□□ 1.58
LRP3-202ENST00000590275 SYNRGQ9UMZ2 1314 aa24.94■■□□□ 1.58
LRP3-202ENST00000590275 KLRF2D3W0D1 207 aa24.94■■□□□ 1.58
LRP3-202ENST00000590275 CYTH3O43739 400 aa24.94■■□□□ 1.58
LRP3-202ENST00000590275 RARBP10826 455 aa24.94■■□□□ 1.58
LRP3-202ENST00000590275 SYN1P17600 705 aa24.94■■□□□ 1.58
LRP3-202ENST00000590275 ADCYAP1R1P41586 468 aa24.94■■□□□ 1.58
LRP3-202ENST00000590275 WTAPQ15007 396 aa24.94■■□□□ 1.58
LRP3-202ENST00000590275 TMEM67Q5HYA8 995 aa24.94■■□□□ 1.58
LRP3-202ENST00000590275 CHRDL2Q6WN34 429 aa24.94■■□□□ 1.58
LRP3-202ENST00000590275 ARRDC4Q8NCT1 418 aa24.94■■□□□ 1.58
LRP3-202ENST00000590275 MORC4Q8TE76 937 aa24.94■■□□□ 1.58
LRP3-202ENST00000590275 FERMT2Q96AC1 680 aa24.94■■□□□ 1.58
LRP3-202ENST00000590275 MYL10Q9BUA6 226 aa24.94■■□□□ 1.58
LRP3-202ENST00000590275 ABHD16BQ9H3Z7 469 aa24.94■■□□□ 1.58
LRP3-202ENST00000590275 OPLAHO14841 1288 aa24.93■■□□□ 1.58
LRP3-202ENST00000590275 CTAGE5O15320 804 aa24.93■■□□□ 1.58
LRP3-202ENST00000590275 PRC1O43663 620 aa24.93■■□□□ 1.58
LRP3-202ENST00000590275 RPS6P62753 249 aaKnown RBP24.93■■□□□ 1.58
LRP3-202ENST00000590275 CCSAPQ6IQ19 270 aaPredicted RBP24.93■■□□□ 1.58
LRP3-202ENST00000590275 COL20A1Q9P218 1284 aa24.93■■□□□ 1.58
LRP3-202ENST00000590275 FAM184BQ9ULE4 1060 aa24.93■■□□□ 1.58
LRP3-202ENST00000590275 NR2E3Q9Y5X4 410 aa24.93■■□□□ 1.58
LRP3-202ENST00000590275 PTPDC1A2A3K4 754 aa24.92■■□□□ 1.58
LRP3-202ENST00000590275 CALML3P27482 149 aa24.92■■□□□ 1.58
LRP3-202ENST00000590275 HABP4Q5JVS0 413 aaKnown RBP24.92■■□□□ 1.58
LRP3-202ENST00000590275 TAPT1Q6NXT6 567 aa24.92■■□□□ 1.58
LRP3-202ENST00000590275 EEPD1Q7L9B9 569 aa24.92■■□□□ 1.58
LRP3-202ENST00000590275 KLHDC9Q8NEP7 349 aa24.92■■□□□ 1.58
LRP3-202ENST00000590275 LRRC2Q9BYS8 371 aa24.92■■□□□ 1.58
LRP3-202ENST00000590275 MCM3APO60318 1980 aa24.91■■□□□ 1.58
LRP3-202ENST00000590275 SH2B2O14492 632 aaPredicted RBP24.91■■□□□ 1.58
LRP3-202ENST00000590275 ALDH5A1P51649 535 aaPredicted RBP24.91■■□□□ 1.58
LRP3-202ENST00000590275 ADCK5Q3MIX3 580 aa24.91■■□□□ 1.58
LRP3-202ENST00000590275 RNF207Q6ZRF8 634 aa24.91■■□□□ 1.58
LRP3-202ENST00000590275 FBXO16Q8IX29 292 aaPredicted RBP24.91■■□□□ 1.58
LRP3-202ENST00000590275 RBM27Q9P2N5 1060 aaKnown RBP24.91■■□□□ 1.58
LRP3-202ENST00000590275 PHF24Q9UPV7 400 aa24.91■■□□□ 1.58
LRP3-202ENST00000590275 LRRC37A2A6NM11 1700 aa24.91■■□□□ 1.58
LRP3-202ENST00000590275 ASB14A6NK59 587 aa24.9■■□□□ 1.58
LRP3-202ENST00000590275 KBTBD13C9JR72 458 aa24.9■■□□□ 1.58
LRP3-202ENST00000590275 DUSP11O75319 330 aaKnown RBP24.9■■□□□ 1.58
LRP3-202ENST00000590275 NEFLP07196 543 aa24.9■■□□□ 1.58
LRP3-202ENST00000590275 SLC39A5Q6ZMH5 540 aa24.9■■□□□ 1.58
LRP3-202ENST00000590275 RIOX1Q9H6W3 641 aa24.9■■□□□ 1.58
LRP3-202ENST00000590275 FBXO11Q86XK2 927 aa24.89■■□□□ 1.58
LRP3-202ENST00000590275 UPF3AQ9H1J1 476 aaKnown RBP24.89■■□□□ 1.58
LRP3-202ENST00000590275 GNEQ9Y223 722 aaKnown RBP24.89■■□□□ 1.58
LRP3-202ENST00000590275 ERICH2A1L162 156 aa24.88■■□□□ 1.57
LRP3-202ENST00000590275 DHX16O60231 1041 aaKnown RBP24.88■■□□□ 1.57
LRP3-202ENST00000590275 SMPD1P17405 629 aa24.88■■□□□ 1.57
LRP3-202ENST00000590275 EDNRBP24530 442 aa24.88■■□□□ 1.57
LRP3-202ENST00000590275 RTP1P59025 263 aa24.88■■□□□ 1.57
LRP3-202ENST00000590275 SNX17Q15036 470 aa24.88■■□□□ 1.57
LRP3-202ENST00000590275 RAB11FIP4Q86YS3 637 aa24.88■■□□□ 1.57
LRP3-202ENST00000590275 ZNF654Q8IZM8 581 aa24.88■■□□□ 1.57
LRP3-202ENST00000590275 RGS22Q8NE09 1264 aa24.88■■□□□ 1.57
LRP3-202ENST00000590275 SYTL5Q8TDW5 730 aaPredicted RBP24.88■■□□□ 1.57
LRP3-202ENST00000590275 TCEANC2Q96MN5 208 aa24.88■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms