RNA–Protein interactions for RNA: ENST00000589219.1

VPS25-202, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-202ENST00000589219 HEATR3Q7Z4Q2 680 aa11.29□□□□□ -0.6
VPS25-202ENST00000589219 LRRC8AQ8IWT6 810 aa11.29□□□□□ -0.6
VPS25-202ENST00000589219 STAG2Q8N3U4 1231 aa11.29□□□□□ -0.6
VPS25-202ENST00000589219 IQUBQ8NA54 791 aa11.29□□□□□ -0.6
VPS25-202ENST00000589219 ENOX1Q8TC92 643 aaKnown RBP11.29□□□□□ -0.6
VPS25-202ENST00000589219 CACTINQ8WUQ7 758 aaKnown RBP11.29□□□□□ -0.6
VPS25-202ENST00000589219 GPKOWQ92917 476 aaPredicted RBP eCLIP11.29□□□□□ -0.6
VPS25-202ENST00000589219 DHX58Q96C10 678 aa11.29□□□□□ -0.6
VPS25-202ENST00000589219 RRP36Q96EU6 259 aaKnown RBP11.29□□□□□ -0.6
VPS25-202ENST00000589219 ZIC5Q96T25 663 aa11.29□□□□□ -0.6
VPS25-202ENST00000589219 XPO4Q9C0E2 1151 aaKnown RBP11.29□□□□□ -0.6
VPS25-202ENST00000589219 EHD4Q9H223 541 aa11.29□□□□□ -0.6
VPS25-202ENST00000589219 IFNKQ9P0W0 207 aa11.29□□□□□ -0.6
VPS25-202ENST00000589219 NRBP1Q9UHY1 535 aa11.29□□□□□ -0.6
VPS25-202ENST00000589219 IGKV6D-41A0A0C4DH26 115 aa11.28□□□□□ -0.6
VPS25-202ENST00000589219 VWA3AA6NCI4 1184 aa11.28□□□□□ -0.6
VPS25-202ENST00000589219 KLRF2D3W0D1 207 aa11.28□□□□□ -0.6
VPS25-202ENST00000589219 PRR29P0C7W0 189 aa11.28□□□□□ -0.6
VPS25-202ENST00000589219 GNA11P29992 359 aa11.28□□□□□ -0.6
VPS25-202ENST00000589219 PRPHP41219 470 aa11.28□□□□□ -0.6
VPS25-202ENST00000589219 HDLBPQ00341 1268 aaKnown RBP11.28□□□□□ -0.6
VPS25-202ENST00000589219 LRMPQ12912 555 aa11.28□□□□□ -0.6
VPS25-202ENST00000589219 SEMA3FQ13275 785 aa11.28□□□□□ -0.6
VPS25-202ENST00000589219 TTLL12Q14166 644 aaPredicted RBP11.28□□□□□ -0.6
VPS25-202ENST00000589219 APOBEC3FQ8IUX4 373 aaKnown RBP11.28□□□□□ -0.6
VPS25-202ENST00000589219 KIAA0825Q8IV33 1275 aa11.28□□□□□ -0.6
VPS25-202ENST00000589219 CERS5Q8N5B7 392 aa11.28□□□□□ -0.6
VPS25-202ENST00000589219 CEP95Q96GE4 821 aa11.28□□□□□ -0.6
VPS25-202ENST00000589219 GSDMAQ96QA5 445 aa11.28□□□□□ -0.6
VPS25-202ENST00000589219 MXD3Q9BW11 206 aa11.28□□□□□ -0.6
VPS25-202ENST00000589219 MRIQ9BWK5 157 aa11.28□□□□□ -0.6
VPS25-202ENST00000589219 ZMYND12Q9H0C1 365 aa11.28□□□□□ -0.6
VPS25-202ENST00000589219 C6orf50Q9HD87 102 aa11.28□□□□□ -0.6
VPS25-202ENST00000589219 KCND1Q9NSA2 647 aa11.28□□□□□ -0.6
VPS25-202ENST00000589219 SERPINB13Q9UIV8 391 aa11.28□□□□□ -0.6
VPS25-202ENST00000589219 GREB1LQ9C091 1923 aaPredicted RBP11.28□□□□□ -0.6
VPS25-202ENST00000589219 COL2A1P02458 1487 aaPredicted RBP11.27□□□□□ -0.6
VPS25-202ENST00000589219 UQCRHLA0A096LP55 91 aa11.27□□□□□ -0.61
VPS25-202ENST00000589219 CCDC85CA6NKD9 419 aa11.27□□□□□ -0.61
VPS25-202ENST00000589219 WNT7AO00755 349 aa11.27□□□□□ -0.61
VPS25-202ENST00000589219 CYTH3O43739 400 aa11.27□□□□□ -0.61
VPS25-202ENST00000589219 GTPBP6O43824 516 aaPredicted RBP11.27□□□□□ -0.61
VPS25-202ENST00000589219 TRPA1O75762 1119 aa11.27□□□□□ -0.61
VPS25-202ENST00000589219 UQCRHP07919 91 aa11.27□□□□□ -0.61
VPS25-202ENST00000589219 SNHG28P0DPA3 235 aa11.27□□□□□ -0.61
VPS25-202ENST00000589219 MCM7P33993 719 aa11.27□□□□□ -0.61
VPS25-202ENST00000589219 NAPAP54920 295 aa11.27□□□□□ -0.61
VPS25-202ENST00000589219 PICALMQ13492 652 aa11.27□□□□□ -0.61
VPS25-202ENST00000589219 DGKZQ13574 1117 aa11.27□□□□□ -0.61
VPS25-202ENST00000589219 SLC35G1Q2M3R5 365 aa11.27□□□□□ -0.61
VPS25-202ENST00000589219 TMC6Q7Z403 805 aa11.27□□□□□ -0.61
VPS25-202ENST00000589219 FILIP1Q7Z7B0 1213 aa11.27□□□□□ -0.61
VPS25-202ENST00000589219 RASAL3Q86YV0 1011 aa11.27□□□□□ -0.61
VPS25-202ENST00000589219 FOXP4Q8IVH2 680 aaPredicted RBP11.27□□□□□ -0.61
VPS25-202ENST00000589219 PDILTQ8N807 584 aa11.27□□□□□ -0.61
VPS25-202ENST00000589219 CCDC112Q8NEF3 446 aa11.27□□□□□ -0.61
VPS25-202ENST00000589219 PAGE5Q96GU1 130 aa11.27□□□□□ -0.61
VPS25-202ENST00000589219 CSRNP1Q96S65 589 aa11.27□□□□□ -0.61
VPS25-202ENST00000589219 HSD3B7Q9H2F3 369 aa11.27□□□□□ -0.61
VPS25-202ENST00000589219 MAGEF1Q9HAY2 307 aa11.27□□□□□ -0.61
VPS25-202ENST00000589219 USP40Q9NVE5 1235 aa11.27□□□□□ -0.61
VPS25-202ENST00000589219 RMND1Q9NWS8 449 aa11.27□□□□□ -0.61
VPS25-202ENST00000589219 MTMR4Q9NYA4 1195 aa11.27□□□□□ -0.61
VPS25-202ENST00000589219 PCDHA6Q9UN73 950 aa11.27□□□□□ -0.61
VPS25-202ENST00000589219 PCDHA8Q9Y5H6 950 aa11.27□□□□□ -0.61
VPS25-202ENST00000589219 A0A087X0B3 334 aa11.26□□□□□ -0.61
VPS25-202ENST00000589219 DYNC1I1O14576 645 aa11.26□□□□□ -0.61
VPS25-202ENST00000589219 TTLL1O95922 423 aa11.26□□□□□ -0.61
VPS25-202ENST00000589219 SERPINC1P01008 464 aa11.26□□□□□ -0.61
VPS25-202ENST00000589219 MYL1P05976 194 aa11.26□□□□□ -0.61
VPS25-202ENST00000589219 PDHBP11177 359 aa11.26□□□□□ -0.61
VPS25-202ENST00000589219 SFPQP23246 707 aaKnown RBP eCLIP11.26□□□□□ -0.61
VPS25-202ENST00000589219 UBASH3AP57075 661 aa11.26□□□□□ -0.61
VPS25-202ENST00000589219 CCZ1BP86790 482 aa11.26□□□□□ -0.61
VPS25-202ENST00000589219 CCZ1P86791 482 aaPredicted RBP11.26□□□□□ -0.61
VPS25-202ENST00000589219 DPYDQ12882 1025 aa11.26□□□□□ -0.61
VPS25-202ENST00000589219 NONOQ15233 471 aaKnown RBP eCLIP11.26□□□□□ -0.61
VPS25-202ENST00000589219 DLGAP5Q15398 846 aa11.26□□□□□ -0.61
VPS25-202ENST00000589219 E2F4Q16254 413 aa11.26□□□□□ -0.61
VPS25-202ENST00000589219 NOM1Q5C9Z4 860 aaKnown RBP11.26□□□□□ -0.61
VPS25-202ENST00000589219 TYW1BQ6NUM6 668 aa11.26□□□□□ -0.61
VPS25-202ENST00000589219 USP49Q70CQ1 688 aa11.26□□□□□ -0.61
VPS25-202ENST00000589219 ARMC9Q7Z3E5 817 aa11.26□□□□□ -0.61
VPS25-202ENST00000589219 C17orf53Q8N3J3 647 aaPredicted RBP11.26□□□□□ -0.61
VPS25-202ENST00000589219 C4orf32Q8N8J7 132 aa11.26□□□□□ -0.61
VPS25-202ENST00000589219 MYRIPQ8NFW9 859 aa11.26□□□□□ -0.61
VPS25-202ENST00000589219 EPSTI1Q96J88 318 aa11.26□□□□□ -0.61
VPS25-202ENST00000589219 CCDC17Q96LX7 622 aa11.26□□□□□ -0.61
VPS25-202ENST00000589219 AK8Q96MA6 479 aa11.26□□□□□ -0.61
VPS25-202ENST00000589219 ZDHHC15Q96MV8 337 aa11.26□□□□□ -0.61
VPS25-202ENST00000589219 MCOLN1Q9GZU1 580 aa11.26□□□□□ -0.61
VPS25-202ENST00000589219 DHX36Q9H2U1 1008 aaKnown RBP11.26□□□□□ -0.61
VPS25-202ENST00000589219 CUEDC2Q9H467 287 aa11.26□□□□□ -0.61
VPS25-202ENST00000589219 RIOX1Q9H6W3 641 aa11.26□□□□□ -0.61
VPS25-202ENST00000589219 RNF186Q9NXI6 227 aa11.26□□□□□ -0.61
VPS25-202ENST00000589219 SYNRGQ9UMZ2 1314 aa11.26□□□□□ -0.61
VPS25-202ENST00000589219 F8W031 263 aaPredicted RBP11.25□□□□□ -0.61
VPS25-202ENST00000589219 KIF2AO00139 706 aaPredicted RBP11.25□□□□□ -0.61
VPS25-202ENST00000589219 CCP110O43303 1012 aa11.25□□□□□ -0.61
VPS25-202ENST00000589219 SKILP12757 684 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms